Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3571 and Ac3H11_3572 overlap by 4 nucleotides Ac3H11_3572 and Ac3H11_3573 overlap by 4 nucleotides Ac3H11_3573 and Ac3H11_3574 are separated by 9 nucleotides Ac3H11_3574 and Ac3H11_3575 are separated by 88 nucleotides
Ac3H11_3571 - ABC-type tungstate transport system, permease protein, at 126,459 to 127,196
_3571
Ac3H11_3572 - ABC-type tungstate transport system, ATP-binding protein, at 127,193 to 127,921
_3572
Ac3H11_3573 - ABC-type tungstate transport system, periplasmic binding protein, at 127,918 to 128,757
_3573
Ac3H11_3574 - Molybdenum-binding periplasmic protein, at 128,767 to 129,591
_3574
Ac3H11_3575 - Ubiquinone biosynthesis monooxygenase UbiB, at 129,680 to 131,380
_3575
Position (kb) 127
128
129 Strain fitness (log2 ratio) -1
0
1
2 at 127.817 kb on + strand, within Ac3H11_3572 at 128.254 kb on + strand, within Ac3H11_3573 at 128.254 kb on + strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.255 kb on - strand, within Ac3H11_3573 at 128.506 kb on + strand, within Ac3H11_3573 at 128.506 kb on + strand, within Ac3H11_3573 at 129.221 kb on - strand, within Ac3H11_3574 at 129.268 kb on + strand, within Ac3H11_3574 at 129.269 kb on - strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.346 kb on + strand, within Ac3H11_3574 at 129.347 kb on - strand, within Ac3H11_3574 at 129.391 kb on + strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.392 kb on - strand, within Ac3H11_3574 at 129.479 kb on - strand, within Ac3H11_3574
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 127,817 + Ac3H11_3572 0.86 +0.1 128,254 + Ac3H11_3573 0.40 +0.6 128,254 + Ac3H11_3573 0.40 +0.1 128,255 - Ac3H11_3573 0.40 -0.4 128,255 - Ac3H11_3573 0.40 +1.1 128,255 - Ac3H11_3573 0.40 -0.8 128,506 + Ac3H11_3573 0.70 +0.8 128,506 + Ac3H11_3573 0.70 +1.9 129,221 - Ac3H11_3574 0.55 +0.1 129,268 + Ac3H11_3574 0.61 -0.9 129,269 - Ac3H11_3574 0.61 +0.7 129,346 + Ac3H11_3574 0.70 -1.0 129,346 + Ac3H11_3574 0.70 +0.5 129,346 + Ac3H11_3574 0.70 -1.3 129,346 + Ac3H11_3574 0.70 +0.3 129,347 - Ac3H11_3574 0.70 -1.4 129,391 + Ac3H11_3574 0.76 +0.1 129,392 - Ac3H11_3574 0.76 -0.6 129,392 - Ac3H11_3574 0.76 +1.2 129,392 - Ac3H11_3574 0.76 -0.2 129,479 - Ac3H11_3574 0.86 -0.4
Or see this region's nucleotide sequence