Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_26170 and AO353_26175 are separated by 2 nucleotides AO353_26175 and AO353_26180 are separated by 9 nucleotides AO353_26180 and AO353_26185 overlap by 1 nucleotides
AO353_26170: AO353_26170 - hydrolase Nlp/P60, at 5,758,298 to 5,759,062
_26170
AO353_26175: AO353_26175 - phage tail protein, at 5,759,065 to 5,759,814
_26175
AO353_26180: AO353_26180 - phage tail protein, at 5,759,824 to 5,760,162
_26180
AO353_26185: AO353_26185 - phage tail protein, at 5,760,162 to 5,763,419
_26185
Position (kb) 5759
5760 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5758.072 kb on + strand at 5758.072 kb on + strand at 5758.072 kb on + strand at 5758.072 kb on + strand at 5758.072 kb on + strand at 5758.072 kb on + strand at 5758.073 kb on - strand at 5758.083 kb on + strand at 5758.083 kb on + strand at 5758.083 kb on + strand at 5758.083 kb on + strand at 5758.083 kb on + strand at 5758.083 kb on + strand at 5758.084 kb on - strand at 5758.084 kb on - strand at 5758.084 kb on - strand at 5758.084 kb on - strand at 5758.084 kb on - strand at 5758.084 kb on - strand at 5758.097 kb on + strand at 5758.097 kb on + strand at 5758.097 kb on + strand at 5758.097 kb on + strand at 5758.097 kb on + strand at 5758.097 kb on + strand at 5758.098 kb on - strand at 5758.098 kb on - strand at 5758.098 kb on - strand at 5758.098 kb on - strand at 5758.098 kb on - strand at 5758.098 kb on - strand at 5758.099 kb on + strand at 5758.099 kb on + strand at 5758.099 kb on + strand at 5758.099 kb on + strand at 5758.099 kb on + strand at 5758.099 kb on + strand at 5758.099 kb on + strand at 5758.099 kb on + strand at 5758.100 kb on - strand at 5758.100 kb on - strand at 5758.100 kb on - strand at 5758.100 kb on - strand at 5758.137 kb on - strand at 5758.242 kb on + strand at 5758.243 kb on - strand at 5758.243 kb on - strand at 5758.272 kb on + strand at 5758.272 kb on + strand at 5758.272 kb on + strand at 5758.272 kb on + strand at 5758.273 kb on - strand at 5758.273 kb on - strand at 5758.299 kb on + strand at 5758.299 kb on + strand at 5758.299 kb on + strand at 5758.299 kb on + strand at 5758.299 kb on + strand at 5758.299 kb on + strand at 5758.300 kb on - strand at 5758.300 kb on - strand at 5758.300 kb on - strand at 5758.300 kb on - strand at 5758.394 kb on + strand, within AO353_26170 at 5758.394 kb on + strand, within AO353_26170 at 5758.394 kb on + strand, within AO353_26170 at 5758.395 kb on - strand, within AO353_26170 at 5758.395 kb on - strand, within AO353_26170 at 5758.395 kb on - strand, within AO353_26170 at 5758.395 kb on - strand, within AO353_26170 at 5758.395 kb on - strand, within AO353_26170 at 5758.395 kb on - strand, within AO353_26170 at 5758.406 kb on + strand, within AO353_26170 at 5758.407 kb on - strand, within AO353_26170 at 5758.505 kb on + strand, within AO353_26170 at 5758.569 kb on + strand, within AO353_26170 at 5758.569 kb on + strand, within AO353_26170 at 5758.569 kb on + strand, within AO353_26170 at 5758.570 kb on - strand, within AO353_26170 at 5758.570 kb on - strand, within AO353_26170 at 5758.570 kb on - strand, within AO353_26170 at 5758.581 kb on + strand, within AO353_26170 at 5758.582 kb on - strand, within AO353_26170 at 5758.662 kb on + strand at 5758.663 kb on - strand, within AO353_26170 at 5758.738 kb on + strand, within AO353_26170 at 5758.738 kb on + strand, within AO353_26170 at 5758.738 kb on + strand, within AO353_26170 at 5758.738 kb on + strand, within AO353_26170 at 5758.754 kb on + strand, within AO353_26170 at 5758.754 kb on + strand, within AO353_26170 at 5758.754 kb on + strand, within AO353_26170 at 5758.754 kb on + strand, within AO353_26170 at 5758.754 kb on + strand, within AO353_26170 at 5758.754 kb on + strand, within AO353_26170 at 5758.755 kb on - strand, within AO353_26170 at 5758.862 kb on + strand, within AO353_26170 at 5758.959 kb on + strand, within AO353_26170 at 5758.960 kb on - strand, within AO353_26170 at 5758.962 kb on + strand, within AO353_26170 at 5758.962 kb on + strand, within AO353_26170 at 5758.962 kb on + strand, within AO353_26170 at 5758.962 kb on + strand, within AO353_26170 at 5758.962 kb on + strand, within AO353_26170 at 5758.962 kb on + strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5758.963 kb on - strand, within AO353_26170 at 5759.036 kb on + strand at 5759.139 kb on + strand at 5759.139 kb on + strand at 5759.140 kb on - strand, within AO353_26175 at 5759.213 kb on + strand, within AO353_26175 at 5759.213 kb on + strand, within AO353_26175 at 5759.214 kb on - strand, within AO353_26175 at 5759.214 kb on - strand, within AO353_26175 at 5759.257 kb on - strand, within AO353_26175 at 5759.375 kb on + strand, within AO353_26175 at 5759.375 kb on + strand, within AO353_26175 at 5759.375 kb on + strand, within AO353_26175 at 5759.375 kb on + strand, within AO353_26175 at 5759.376 kb on - strand, within AO353_26175 at 5759.376 kb on - strand, within AO353_26175 at 5759.376 kb on - strand, within AO353_26175 at 5759.376 kb on - strand, within AO353_26175 at 5759.376 kb on - strand, within AO353_26175 at 5759.447 kb on + strand, within AO353_26175 at 5759.448 kb on - strand, within AO353_26175 at 5759.448 kb on - strand, within AO353_26175 at 5759.448 kb on - strand, within AO353_26175 at 5759.448 kb on - strand, within AO353_26175 at 5759.488 kb on + strand, within AO353_26175 at 5759.488 kb on + strand, within AO353_26175 at 5759.488 kb on + strand, within AO353_26175 at 5759.489 kb on - strand, within AO353_26175 at 5759.489 kb on - strand, within AO353_26175 at 5759.489 kb on - strand, within AO353_26175 at 5759.529 kb on + strand, within AO353_26175 at 5759.615 kb on + strand, within AO353_26175 at 5759.615 kb on + strand, within AO353_26175 at 5759.616 kb on - strand, within AO353_26175 at 5759.785 kb on + strand at 5759.785 kb on + strand at 5759.786 kb on - strand at 5759.814 kb on + strand at 5759.814 kb on + strand at 5759.815 kb on - strand at 5759.815 kb on - strand at 5759.815 kb on - strand at 5759.815 kb on - strand at 5759.815 kb on - strand at 5759.815 kb on - strand at 5759.815 kb on - strand at 5759.815 kb on - strand at 5759.825 kb on + strand at 5759.863 kb on - strand, within AO353_26180 at 5759.992 kb on + strand, within AO353_26180 at 5759.993 kb on - strand, within AO353_26180 at 5760.014 kb on + strand, within AO353_26180 at 5760.014 kb on + strand, within AO353_26180 at 5760.015 kb on - strand, within AO353_26180 at 5760.015 kb on - strand, within AO353_26180 at 5760.015 kb on - strand, within AO353_26180 at 5760.039 kb on + strand, within AO353_26180 at 5760.040 kb on - strand, within AO353_26180 at 5760.040 kb on - strand, within AO353_26180 at 5760.072 kb on - strand, within AO353_26180 at 5760.257 kb on + strand at 5760.258 kb on - strand at 5760.258 kb on - strand at 5760.346 kb on + strand at 5760.346 kb on + strand at 5760.346 kb on + strand at 5760.347 kb on - strand at 5760.347 kb on - strand at 5760.347 kb on - strand at 5760.347 kb on - strand at 5760.350 kb on + strand at 5760.350 kb on + strand at 5760.350 kb on + strand at 5760.350 kb on + strand at 5760.351 kb on - strand at 5760.351 kb on - strand at 5760.392 kb on + strand at 5760.445 kb on + strand at 5760.445 kb on + strand at 5760.496 kb on + strand, within AO353_26185 at 5760.497 kb on - strand, within AO353_26185 at 5760.497 kb on - strand, within AO353_26185 at 5760.497 kb on - strand, within AO353_26185 at 5760.655 kb on + strand, within AO353_26185 at 5760.655 kb on + strand, within AO353_26185 at 5760.655 kb on + strand, within AO353_26185 at 5760.655 kb on + strand, within AO353_26185 at 5760.656 kb on - strand, within AO353_26185 at 5760.656 kb on - strand, within AO353_26185
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 5,758,072 + +0.6 5,758,072 + -0.5 5,758,072 + +0.1 5,758,072 + +0.6 5,758,072 + -0.7 5,758,072 + -1.1 5,758,073 - -1.3 5,758,083 + +0.1 5,758,083 + +1.5 5,758,083 + -0.2 5,758,083 + +0.2 5,758,083 + +1.1 5,758,083 + -0.2 5,758,084 - +0.3 5,758,084 - +0.4 5,758,084 - -0.3 5,758,084 - -0.1 5,758,084 - +0.5 5,758,084 - -1.4 5,758,097 + +1.2 5,758,097 + +0.7 5,758,097 + -1.5 5,758,097 + -2.3 5,758,097 + +0.2 5,758,097 + -2.1 5,758,098 - -1.2 5,758,098 - -1.3 5,758,098 - -0.6 5,758,098 - -0.5 5,758,098 - -0.6 5,758,098 - -1.5 5,758,099 + -1.4 5,758,099 + +0.5 5,758,099 + +0.0 5,758,099 + -0.3 5,758,099 + -0.7 5,758,099 + -1.1 5,758,099 + +1.2 5,758,099 + +0.9 5,758,100 - +0.9 5,758,100 - -1.1 5,758,100 - +0.6 5,758,100 - -1.3 5,758,137 - -1.7 5,758,242 + -0.5 5,758,243 - -2.5 5,758,243 - -2.0 5,758,272 + -1.6 5,758,272 + -0.1 5,758,272 + -0.2 5,758,272 + -0.2 5,758,273 - -1.2 5,758,273 - +0.3 5,758,299 + -0.9 5,758,299 + -1.4 5,758,299 + -0.5 5,758,299 + -0.4 5,758,299 + -0.2 5,758,299 + -0.6 5,758,300 - +0.6 5,758,300 - +1.5 5,758,300 - +1.0 5,758,300 - -1.2 5,758,394 + AO353_26170 0.13 -0.1 5,758,394 + AO353_26170 0.13 +1.5 5,758,394 + AO353_26170 0.13 +0.9 5,758,395 - AO353_26170 0.13 +1.6 5,758,395 - AO353_26170 0.13 -0.6 5,758,395 - AO353_26170 0.13 +1.1 5,758,395 - AO353_26170 0.13 +0.1 5,758,395 - AO353_26170 0.13 -0.2 5,758,395 - AO353_26170 0.13 +0.4 5,758,406 + AO353_26170 0.14 -1.1 5,758,407 - AO353_26170 0.14 -0.4 5,758,505 + AO353_26170 0.27 +1.0 5,758,569 + AO353_26170 0.35 -0.7 5,758,569 + AO353_26170 0.35 -0.4 5,758,569 + AO353_26170 0.35 -0.6 5,758,570 - AO353_26170 0.36 -0.7 5,758,570 - AO353_26170 0.36 -0.7 5,758,570 - AO353_26170 0.36 -1.2 5,758,581 + AO353_26170 0.37 +0.1 5,758,582 - AO353_26170 0.37 -0.5 5,758,662 + -0.2 5,758,663 - AO353_26170 0.48 +0.7 5,758,738 + AO353_26170 0.58 -0.1 5,758,738 + AO353_26170 0.58 -0.1 5,758,738 + AO353_26170 0.58 -0.3 5,758,738 + AO353_26170 0.58 -0.2 5,758,754 + AO353_26170 0.60 -1.4 5,758,754 + AO353_26170 0.60 +0.2 5,758,754 + AO353_26170 0.60 +0.9 5,758,754 + AO353_26170 0.60 -1.8 5,758,754 + AO353_26170 0.60 -0.6 5,758,754 + AO353_26170 0.60 -1.5 5,758,755 - AO353_26170 0.60 +0.3 5,758,862 + AO353_26170 0.74 -2.4 5,758,959 + AO353_26170 0.86 +1.3 5,758,960 - AO353_26170 0.87 -0.8 5,758,962 + AO353_26170 0.87 -1.4 5,758,962 + AO353_26170 0.87 -0.2 5,758,962 + AO353_26170 0.87 +1.2 5,758,962 + AO353_26170 0.87 -0.6 5,758,962 + AO353_26170 0.87 -1.8 5,758,962 + AO353_26170 0.87 -0.3 5,758,963 - AO353_26170 0.87 -0.4 5,758,963 - AO353_26170 0.87 -0.9 5,758,963 - AO353_26170 0.87 +0.6 5,758,963 - AO353_26170 0.87 +1.6 5,758,963 - AO353_26170 0.87 -0.0 5,758,963 - AO353_26170 0.87 +0.1 5,758,963 - AO353_26170 0.87 +0.5 5,758,963 - AO353_26170 0.87 -0.3 5,758,963 - AO353_26170 0.87 +1.8 5,759,036 + -1.3 5,759,139 + +0.2 5,759,139 + -0.2 5,759,140 - AO353_26175 0.10 +0.1 5,759,213 + AO353_26175 0.20 +0.5 5,759,213 + AO353_26175 0.20 +0.4 5,759,214 - AO353_26175 0.20 -0.1 5,759,214 - AO353_26175 0.20 -0.1 5,759,257 - AO353_26175 0.26 +0.0 5,759,375 + AO353_26175 0.41 -0.7 5,759,375 + AO353_26175 0.41 -1.1 5,759,375 + AO353_26175 0.41 +0.4 5,759,375 + AO353_26175 0.41 +1.0 5,759,376 - AO353_26175 0.41 +0.4 5,759,376 - AO353_26175 0.41 +0.5 5,759,376 - AO353_26175 0.41 +2.6 5,759,376 - AO353_26175 0.41 +1.9 5,759,376 - AO353_26175 0.41 -1.1 5,759,447 + AO353_26175 0.51 +1.0 5,759,448 - AO353_26175 0.51 +0.2 5,759,448 - AO353_26175 0.51 -1.6 5,759,448 - AO353_26175 0.51 +0.5 5,759,448 - AO353_26175 0.51 -0.4 5,759,488 + AO353_26175 0.56 -2.4 5,759,488 + AO353_26175 0.56 -0.1 5,759,488 + AO353_26175 0.56 +0.1 5,759,489 - AO353_26175 0.57 +0.8 5,759,489 - AO353_26175 0.57 +0.9 5,759,489 - AO353_26175 0.57 +0.2 5,759,529 + AO353_26175 0.62 +0.6 5,759,615 + AO353_26175 0.73 +0.1 5,759,615 + AO353_26175 0.73 +0.0 5,759,616 - AO353_26175 0.73 +3.1 5,759,785 + +0.1 5,759,785 + +1.5 5,759,786 - +0.3 5,759,814 + +0.6 5,759,814 + +0.3 5,759,815 - -0.9 5,759,815 - -0.4 5,759,815 - -0.8 5,759,815 - +0.6 5,759,815 - -2.3 5,759,815 - -0.6 5,759,815 - +1.2 5,759,815 - +0.4 5,759,825 + -0.2 5,759,863 - AO353_26180 0.12 +0.1 5,759,992 + AO353_26180 0.50 +0.7 5,759,993 - AO353_26180 0.50 +0.8 5,760,014 + AO353_26180 0.56 +0.1 5,760,014 + AO353_26180 0.56 +1.6 5,760,015 - AO353_26180 0.56 -0.8 5,760,015 - AO353_26180 0.56 -1.1 5,760,015 - AO353_26180 0.56 +0.4 5,760,039 + AO353_26180 0.63 +2.1 5,760,040 - AO353_26180 0.64 +0.4 5,760,040 - AO353_26180 0.64 +0.9 5,760,072 - AO353_26180 0.73 -0.7 5,760,257 + -0.2 5,760,258 - +0.9 5,760,258 - -1.1 5,760,346 + -0.2 5,760,346 + -0.3 5,760,346 + -0.2 5,760,347 - -1.2 5,760,347 - +0.4 5,760,347 - +0.1 5,760,347 - +0.3 5,760,350 + -0.9 5,760,350 + +0.5 5,760,350 + +0.2 5,760,350 + +1.8 5,760,351 - -0.7 5,760,351 - +0.3 5,760,392 + +0.3 5,760,445 + +0.9 5,760,445 + +0.1 5,760,496 + AO353_26185 0.10 -0.4 5,760,497 - AO353_26185 0.10 +0.6 5,760,497 - AO353_26185 0.10 +0.1 5,760,497 - AO353_26185 0.10 -0.8 5,760,655 + AO353_26185 0.15 -0.0 5,760,655 + AO353_26185 0.15 -1.2 5,760,655 + AO353_26185 0.15 +0.3 5,760,655 + AO353_26185 0.15 +0.5 5,760,656 - AO353_26185 0.15 +0.5 5,760,656 - AO353_26185 0.15 -1.4
Or see this region's nucleotide sequence