Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22445 and AO353_22450 are separated by 814 nucleotides AO353_22450 and AO353_22455 are separated by 389 nucleotides
AO353_22445: AO353_22445 - hypothetical protein, at 4,919,400 to 4,923,551
_22445
AO353_22450: AO353_22450 - dipeptidase, at 4,924,366 to 4,926,105
_22450
AO353_22455: AO353_22455 - endonuclease, at 4,926,495 to 4,927,370
_22455
Position (kb)
4924
4925
4926
4927 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 4923.619 kb on + strand at 4923.619 kb on + strand at 4923.619 kb on + strand at 4923.619 kb on + strand at 4923.620 kb on - strand at 4923.685 kb on + strand at 4923.685 kb on + strand at 4923.685 kb on + strand at 4923.848 kb on - strand at 4923.880 kb on + strand at 4923.880 kb on + strand at 4923.880 kb on + strand at 4923.880 kb on + strand at 4923.881 kb on - strand at 4923.881 kb on - strand at 4923.881 kb on - strand at 4923.979 kb on + strand at 4923.979 kb on + strand at 4923.979 kb on + strand at 4923.979 kb on + strand at 4923.979 kb on + strand at 4923.979 kb on + strand at 4923.979 kb on + strand at 4923.980 kb on - strand at 4923.980 kb on - strand at 4923.980 kb on - strand at 4923.980 kb on - strand at 4923.980 kb on - strand at 4923.980 kb on - strand at 4923.980 kb on - strand at 4923.980 kb on - strand at 4923.992 kb on - strand at 4923.992 kb on - strand at 4923.992 kb on - strand at 4923.992 kb on - strand at 4924.040 kb on + strand at 4924.040 kb on + strand at 4924.041 kb on - strand at 4924.054 kb on + strand at 4924.080 kb on + strand at 4924.080 kb on + strand at 4924.080 kb on + strand at 4924.080 kb on + strand at 4924.080 kb on + strand at 4924.080 kb on + strand at 4924.080 kb on + strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.081 kb on - strand at 4924.102 kb on + strand at 4924.103 kb on - strand at 4924.103 kb on - strand at 4924.103 kb on - strand at 4924.155 kb on + strand at 4924.155 kb on + strand at 4924.214 kb on + strand at 4924.214 kb on + strand at 4924.214 kb on + strand at 4924.215 kb on - strand at 4924.220 kb on + strand at 4924.220 kb on + strand at 4924.220 kb on + strand at 4924.221 kb on - strand at 4924.221 kb on - strand at 4924.472 kb on + strand at 4924.472 kb on + strand at 4924.472 kb on + strand at 4924.472 kb on + strand at 4924.473 kb on - strand at 4924.473 kb on - strand at 4924.649 kb on + strand, within AO353_22450 at 4924.734 kb on + strand, within AO353_22450 at 4924.735 kb on - strand, within AO353_22450 at 4924.793 kb on + strand, within AO353_22450 at 4924.793 kb on + strand, within AO353_22450 at 4924.793 kb on + strand, within AO353_22450 at 4924.793 kb on + strand, within AO353_22450 at 4924.794 kb on - strand, within AO353_22450 at 4924.794 kb on - strand, within AO353_22450 at 4924.863 kb on - strand, within AO353_22450 at 4924.933 kb on - strand at 4924.933 kb on - strand, within AO353_22450 at 4924.933 kb on - strand, within AO353_22450 at 4925.091 kb on - strand, within AO353_22450 at 4925.315 kb on + strand, within AO353_22450 at 4925.343 kb on - strand, within AO353_22450 at 4925.343 kb on - strand, within AO353_22450 at 4925.343 kb on - strand, within AO353_22450 at 4925.345 kb on + strand, within AO353_22450 at 4925.346 kb on - strand, within AO353_22450 at 4925.379 kb on + strand, within AO353_22450 at 4925.380 kb on - strand, within AO353_22450 at 4925.383 kb on + strand, within AO353_22450 at 4925.383 kb on + strand, within AO353_22450 at 4925.383 kb on + strand, within AO353_22450 at 4925.383 kb on + strand, within AO353_22450 at 4925.384 kb on - strand, within AO353_22450 at 4925.444 kb on + strand, within AO353_22450 at 4925.444 kb on + strand, within AO353_22450 at 4925.445 kb on - strand, within AO353_22450 at 4925.445 kb on - strand, within AO353_22450 at 4925.492 kb on + strand, within AO353_22450 at 4925.492 kb on + strand, within AO353_22450 at 4925.492 kb on + strand, within AO353_22450 at 4925.492 kb on + strand, within AO353_22450 at 4925.492 kb on + strand, within AO353_22450 at 4925.492 kb on + strand, within AO353_22450 at 4925.493 kb on - strand, within AO353_22450 at 4925.493 kb on - strand, within AO353_22450 at 4925.493 kb on - strand, within AO353_22450 at 4925.493 kb on - strand, within AO353_22450 at 4925.493 kb on - strand, within AO353_22450 at 4925.493 kb on - strand, within AO353_22450 at 4925.578 kb on + strand, within AO353_22450 at 4925.578 kb on + strand, within AO353_22450 at 4925.578 kb on + strand, within AO353_22450 at 4925.579 kb on - strand, within AO353_22450 at 4925.579 kb on - strand, within AO353_22450 at 4925.579 kb on - strand, within AO353_22450 at 4925.579 kb on - strand, within AO353_22450 at 4925.640 kb on - strand, within AO353_22450 at 4925.807 kb on + strand, within AO353_22450 at 4925.807 kb on + strand, within AO353_22450 at 4925.808 kb on - strand, within AO353_22450 at 4925.808 kb on - strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.822 kb on + strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.823 kb on - strand, within AO353_22450 at 4925.998 kb on - strand at 4926.176 kb on + strand at 4926.176 kb on + strand at 4926.176 kb on + strand at 4926.177 kb on - strand at 4926.177 kb on - strand at 4926.195 kb on + strand at 4926.196 kb on - strand at 4926.208 kb on + strand at 4926.208 kb on + strand at 4926.208 kb on + strand at 4926.209 kb on - strand at 4926.209 kb on - strand at 4926.283 kb on + strand at 4926.283 kb on + strand at 4926.283 kb on + strand at 4926.283 kb on + strand at 4926.358 kb on + strand at 4926.370 kb on + strand at 4926.389 kb on + strand at 4926.389 kb on + strand at 4926.389 kb on + strand at 4926.390 kb on - strand at 4926.390 kb on - strand at 4926.390 kb on - strand at 4926.471 kb on + strand at 4926.471 kb on + strand at 4926.503 kb on - strand at 4926.503 kb on - strand at 4926.503 kb on - strand at 4926.511 kb on + strand at 4926.512 kb on - strand at 4926.657 kb on + strand, within AO353_22455 at 4926.657 kb on + strand, within AO353_22455 at 4926.657 kb on + strand, within AO353_22455 at 4926.657 kb on + strand, within AO353_22455 at 4926.658 kb on - strand, within AO353_22455 at 4926.792 kb on + strand, within AO353_22455 at 4926.889 kb on - strand, within AO353_22455 at 4926.889 kb on - strand, within AO353_22455 at 4926.889 kb on - strand, within AO353_22455 at 4926.889 kb on - strand, within AO353_22455 at 4926.903 kb on - strand, within AO353_22455 at 4926.903 kb on - strand, within AO353_22455 at 4926.903 kb on - strand, within AO353_22455
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 4,923,619 + -0.5 4,923,619 + -2.3 4,923,619 + -2.3 4,923,619 + -0.2 4,923,620 - -0.8 4,923,685 + -0.1 4,923,685 + -1.3 4,923,685 + -0.3 4,923,848 - -1.1 4,923,880 + -1.0 4,923,880 + -0.4 4,923,880 + +0.5 4,923,880 + -0.2 4,923,881 - -0.8 4,923,881 - +0.5 4,923,881 - -0.4 4,923,979 + -0.4 4,923,979 + +0.5 4,923,979 + +1.0 4,923,979 + -0.5 4,923,979 + -0.8 4,923,979 + +6.0 4,923,979 + +0.4 4,923,980 - +0.8 4,923,980 - +0.5 4,923,980 - -0.8 4,923,980 - -0.7 4,923,980 - -0.5 4,923,980 - +0.9 4,923,980 - -1.6 4,923,980 - +0.2 4,923,992 - -0.8 4,923,992 - -0.8 4,923,992 - -1.0 4,923,992 - -0.7 4,924,040 + +0.4 4,924,040 + +2.2 4,924,041 - -1.0 4,924,054 + +0.4 4,924,080 + -0.1 4,924,080 + -0.8 4,924,080 + +1.4 4,924,080 + -0.0 4,924,080 + +0.2 4,924,080 + +0.4 4,924,080 + +1.0 4,924,081 - +0.6 4,924,081 - -1.0 4,924,081 - -0.1 4,924,081 - +0.8 4,924,081 - +0.0 4,924,081 - +0.3 4,924,081 - +0.5 4,924,081 - +0.9 4,924,081 - -0.1 4,924,081 - +1.3 4,924,102 + -0.1 4,924,103 - +0.7 4,924,103 - -0.8 4,924,103 - -0.8 4,924,155 + +1.2 4,924,155 + +0.3 4,924,214 + -0.4 4,924,214 + +0.0 4,924,214 + -0.2 4,924,215 - -0.8 4,924,220 + -0.9 4,924,220 + +1.0 4,924,220 + -0.8 4,924,221 - -0.8 4,924,221 - -1.0 4,924,472 + +1.2 4,924,472 + +0.5 4,924,472 + +0.6 4,924,472 + +0.4 4,924,473 - -2.0 4,924,473 - +0.7 4,924,649 + AO353_22450 0.16 -0.4 4,924,734 + AO353_22450 0.21 -1.4 4,924,735 - AO353_22450 0.21 -1.4 4,924,793 + AO353_22450 0.25 +1.1 4,924,793 + AO353_22450 0.25 -0.0 4,924,793 + AO353_22450 0.25 +1.2 4,924,793 + AO353_22450 0.25 -1.0 4,924,794 - AO353_22450 0.25 -0.6 4,924,794 - AO353_22450 0.25 +0.4 4,924,863 - AO353_22450 0.29 -0.9 4,924,933 - +0.6 4,924,933 - AO353_22450 0.33 -0.1 4,924,933 - AO353_22450 0.33 +0.2 4,925,091 - AO353_22450 0.42 -0.7 4,925,315 + AO353_22450 0.55 +0.2 4,925,343 - AO353_22450 0.56 -0.7 4,925,343 - AO353_22450 0.56 +0.4 4,925,343 - AO353_22450 0.56 -1.3 4,925,345 + AO353_22450 0.56 +0.3 4,925,346 - AO353_22450 0.56 +0.9 4,925,379 + AO353_22450 0.58 +0.3 4,925,380 - AO353_22450 0.58 -0.8 4,925,383 + AO353_22450 0.58 +0.2 4,925,383 + AO353_22450 0.58 -1.0 4,925,383 + AO353_22450 0.58 +1.0 4,925,383 + AO353_22450 0.58 -1.3 4,925,384 - AO353_22450 0.59 -0.1 4,925,444 + AO353_22450 0.62 +0.4 4,925,444 + AO353_22450 0.62 -2.1 4,925,445 - AO353_22450 0.62 -1.7 4,925,445 - AO353_22450 0.62 -1.0 4,925,492 + AO353_22450 0.65 -0.4 4,925,492 + AO353_22450 0.65 -0.7 4,925,492 + AO353_22450 0.65 +0.2 4,925,492 + AO353_22450 0.65 +0.5 4,925,492 + AO353_22450 0.65 -2.9 4,925,492 + AO353_22450 0.65 -0.5 4,925,493 - AO353_22450 0.65 -1.0 4,925,493 - AO353_22450 0.65 -1.3 4,925,493 - AO353_22450 0.65 +0.9 4,925,493 - AO353_22450 0.65 -0.9 4,925,493 - AO353_22450 0.65 +0.1 4,925,493 - AO353_22450 0.65 +2.2 4,925,578 + AO353_22450 0.70 -0.8 4,925,578 + AO353_22450 0.70 -0.4 4,925,578 + AO353_22450 0.70 -0.2 4,925,579 - AO353_22450 0.70 -0.7 4,925,579 - AO353_22450 0.70 -0.6 4,925,579 - AO353_22450 0.70 +0.9 4,925,579 - AO353_22450 0.70 -0.1 4,925,640 - AO353_22450 0.73 -0.5 4,925,807 + AO353_22450 0.83 +0.8 4,925,807 + AO353_22450 0.83 -2.0 4,925,808 - AO353_22450 0.83 -0.1 4,925,808 - AO353_22450 0.83 -0.6 4,925,822 + AO353_22450 0.84 -0.5 4,925,822 + AO353_22450 0.84 +1.2 4,925,822 + AO353_22450 0.84 +1.8 4,925,822 + AO353_22450 0.84 -1.2 4,925,822 + AO353_22450 0.84 +0.7 4,925,822 + AO353_22450 0.84 +0.3 4,925,822 + AO353_22450 0.84 -1.8 4,925,822 + AO353_22450 0.84 +0.2 4,925,822 + AO353_22450 0.84 -0.2 4,925,823 - AO353_22450 0.84 -0.7 4,925,823 - AO353_22450 0.84 -2.1 4,925,823 - AO353_22450 0.84 -0.4 4,925,823 - AO353_22450 0.84 -0.6 4,925,823 - AO353_22450 0.84 -0.8 4,925,823 - AO353_22450 0.84 -1.2 4,925,823 - AO353_22450 0.84 +0.6 4,925,823 - AO353_22450 0.84 -1.0 4,925,823 - AO353_22450 0.84 +1.2 4,925,823 - AO353_22450 0.84 +0.3 4,925,998 - -0.1 4,926,176 + -0.8 4,926,176 + +0.4 4,926,176 + -1.0 4,926,177 - -0.8 4,926,177 - +0.2 4,926,195 + -1.8 4,926,196 - -0.3 4,926,208 + -0.4 4,926,208 + -0.6 4,926,208 + +0.6 4,926,209 - -1.8 4,926,209 - -2.1 4,926,283 + +0.1 4,926,283 + -1.5 4,926,283 + +0.9 4,926,283 + +0.1 4,926,358 + +0.1 4,926,370 + -0.6 4,926,389 + -0.8 4,926,389 + -1.4 4,926,389 + +0.8 4,926,390 - +1.0 4,926,390 - +0.6 4,926,390 - +1.0 4,926,471 + -1.3 4,926,471 + -0.1 4,926,503 - +0.4 4,926,503 - -0.5 4,926,503 - +0.0 4,926,511 + +0.1 4,926,512 - -0.4 4,926,657 + AO353_22455 0.18 -0.7 4,926,657 + AO353_22455 0.18 -0.1 4,926,657 + AO353_22455 0.18 -0.8 4,926,657 + AO353_22455 0.18 +0.0 4,926,658 - AO353_22455 0.19 -0.6 4,926,792 + AO353_22455 0.34 -0.1 4,926,889 - AO353_22455 0.45 +0.3 4,926,889 - AO353_22455 0.45 -0.8 4,926,889 - AO353_22455 0.45 -0.8 4,926,889 - AO353_22455 0.45 -1.0 4,926,903 - AO353_22455 0.47 +2.2 4,926,903 - AO353_22455 0.47 +5.4 4,926,903 - AO353_22455 0.47 -1.1
Or see this region's nucleotide sequence