Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10815

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
2,363,940	+		AO353_10810	0.31	+1.4
2,363,940	+		AO353_10810	0.31	+2.7
2,363,940	+		AO353_10810	0.31	+2.3
2,364,001	+		AO353_10810	0.37	+1.7
2,364,001	+		AO353_10810	0.37	+2.3
2,364,001	+		AO353_10810	0.37	+1.1
2,364,002	-		AO353_10810	0.37	-0.8
2,364,002	-		AO353_10810	0.37	-0.6
2,364,011	+		AO353_10810	0.38	+3.4
2,364,012	-		AO353_10810	0.38	-0.3
2,364,097	+		AO353_10810	0.46	+2.8
2,364,259	+		AO353_10810	0.61	+2.2
2,364,260	-		AO353_10810	0.61	-0.5
2,364,380	+		AO353_10810	0.73	+4.5
2,364,380	+		AO353_10810	0.73	+4.0
2,364,380	+		AO353_10810	0.73	+4.1
2,364,380	+		AO353_10810	0.73	+4.5
2,364,380	+		AO353_10810	0.73	+4.6
2,364,380	+		AO353_10810	0.73	+4.2
2,364,380	+		AO353_10810	0.73	+4.9
2,364,380	+		AO353_10810	0.73	+4.0
2,364,380	+		AO353_10810	0.73	+2.8
2,364,380	+		AO353_10810	0.73	+3.4
2,364,380	+		AO353_10810	0.73	+1.8
2,364,380	+		AO353_10810	0.73	+5.2
2,364,381	-		AO353_10810	0.73	-1.8
2,364,381	-		AO353_10810	0.73	-1.7
2,364,381	-		AO353_10810	0.73	-0.6
2,364,381	-		AO353_10810	0.73	-1.8
2,364,381	-		AO353_10810	0.73	-0.5
2,364,381	-		AO353_10810	0.73	-1.2
2,364,381	-		AO353_10810	0.73	+1.5
2,364,381	-		AO353_10810	0.73	-0.7
2,364,381	-		AO353_10810	0.73	-0.1
2,364,381	-		AO353_10810	0.73	-2.5
2,364,465	+		AO353_10810	0.81	+5.1
2,364,465	+		AO353_10810	0.81	+4.5
2,364,465	+		AO353_10810	0.81	+4.1
2,364,465	+		AO353_10810	0.81	+2.9
2,364,465	+		AO353_10810	0.81	+1.8
2,364,465	+		AO353_10810	0.81	+3.4
2,364,465	+		AO353_10810	0.81	+4.3
2,364,465	+		AO353_10810	0.81	+4.1
2,364,465	+		AO353_10810	0.81	+3.1
2,364,465	+		AO353_10810	0.81	+4.4
2,364,465	+		AO353_10810	0.81	+3.9
2,364,465	+		AO353_10810	0.81	+4.3
2,364,465	+		AO353_10810	0.81	+3.9
2,364,465	+		AO353_10810	0.81	+3.8
2,364,465	+		AO353_10810	0.81	+4.1
2,364,465	+		AO353_10810	0.81	+3.9
2,364,466	-		AO353_10810	0.81	-2.4
2,364,466	-		AO353_10810	0.81	-0.7
2,364,466	-		AO353_10810	0.81	-0.3
2,364,466	-		AO353_10810	0.81	-0.6
2,364,466	-		AO353_10810	0.81	-0.9
2,364,466	-		AO353_10810	0.81	+0.2
2,364,502	+		AO353_10810	0.84	+4.4
2,364,503	+		AO353_10810	0.84	+3.8
2,364,503	+		AO353_10810	0.84	+4.2
2,364,503	+		AO353_10810	0.84	+3.1
2,364,503	+		AO353_10810	0.84	+5.2
2,364,503	+		AO353_10810	0.84	+4.8
2,364,503	+		AO353_10810	0.84	+4.9
2,364,503	+		AO353_10810	0.84	+3.5
2,364,503	+		AO353_10810	0.84	+3.9
2,364,503	+		AO353_10810	0.84	+3.7
2,364,503	+		AO353_10810	0.84	+3.2
2,364,503	+		AO353_10810	0.84	+4.4
2,364,503	+		AO353_10810	0.84	+4.4
2,364,503	+		AO353_10810	0.84	+5.1
2,364,504	-		AO353_10810	0.84	-0.2
2,364,504	-		AO353_10810	0.84	+1.6
2,364,504	-		AO353_10810	0.84	-0.3
2,364,504	-		AO353_10810	0.84	+0.7
2,364,504	-		AO353_10810	0.84	-0.3
2,364,504	-		AO353_10810	0.84	-2.1
2,364,504	-		AO353_10810	0.84	-2.2
2,364,504	-		AO353_10810	0.84	-2.0
2,364,504	-		AO353_10810	0.84	-1.8
2,364,504	-		AO353_10810	0.84	-0.0
2,364,504	-		AO353_10810	0.84	-1.1
2,364,504	-		AO353_10810	0.84	-2.3
2,364,504	-		AO353_10810	0.84	-0.9
2,364,526	+		AO353_10810	0.86	+4.6
2,364,526	+		AO353_10810	0.86	+4.9
2,364,526	+		AO353_10810	0.86	+4.0
2,364,526	+		AO353_10810	0.86	+3.2
2,364,526	+		AO353_10810	0.86	+4.9
2,364,526	+		AO353_10810	0.86	+6.6
2,364,527	-		AO353_10810	0.86	-0.5
2,364,527	-		AO353_10810	0.86	-2.6
2,364,527	-		AO353_10810	0.86	-1.9
2,364,582	+				+4.7
2,364,582	+				+5.3
2,364,583	-				-1.9
2,364,583	-				-3.3
2,364,583	-				-1.2
2,364,583	-				-0.3
2,364,583	-				-1.8
2,364,583	-				-2.7
2,364,668	+				+6.1
2,364,669	-				-0.9
2,364,683	+				+4.7
2,364,693	-				-0.4
2,364,693	-				-0.9
2,364,693	-				-2.3
2,364,754	+				+5.2
2,364,754	+				+4.8
2,364,754	+				+4.7
2,364,754	+				+5.7
2,364,755	-				-2.1
2,364,755	-				-3.3
2,364,778	+				+4.9
2,364,778	+				+5.3
2,364,779	-				-2.4
2,364,825	-				-2.5
2,364,864	-				-1.6
2,364,864	-				-0.5
2,364,873	-				-1.8
2,364,928	+				-0.5
2,364,928	+				-3.0
2,364,928	+				-3.3
2,364,929	-				+0.0
2,365,014	+		AO353_10815	0.14	-2.1
2,365,014	+		AO353_10815	0.14	-2.2
2,365,014	+		AO353_10815	0.14	-1.7
2,365,015	-		AO353_10815	0.14	-1.6
2,365,015	-		AO353_10815	0.14	-1.1
2,365,015	-		AO353_10815	0.14	+0.0
2,365,015	-		AO353_10815	0.14	-0.5
2,365,090	+		AO353_10815	0.24	-1.1
2,365,136	-		AO353_10815	0.30	-1.9
2,365,185	+		AO353_10815	0.37	-0.9
2,365,185	+		AO353_10815	0.37	-0.5
2,365,185	+		AO353_10815	0.37	-2.3
2,365,185	+		AO353_10815	0.37	-2.9
2,365,185	+		AO353_10815	0.37	-2.5
2,365,185	+		AO353_10815	0.37	-2.2
2,365,185	+		AO353_10815	0.37	-3.4
2,365,185	+		AO353_10815	0.37	-2.7
2,365,185	+		AO353_10815	0.37	-0.4
2,365,186	-		AO353_10815	0.37	-2.7
2,365,186	-		AO353_10815	0.37	-2.4
2,365,186	-		AO353_10815	0.37	+0.5
2,365,186	-		AO353_10815	0.37	-3.7
2,365,186	-		AO353_10815	0.37	-1.4
2,365,186	-		AO353_10815	0.37	-2.4
2,365,186	-		AO353_10815	0.37	-0.7
2,365,235	+		AO353_10815	0.44	-1.5
2,365,236	-		AO353_10815	0.44	-1.5
2,365,236	-		AO353_10815	0.44	-1.8
2,365,308	+		AO353_10815	0.54	-2.4
2,365,308	+		AO353_10815	0.54	-1.9
2,365,308	+		AO353_10815	0.54	-1.4
2,365,308	+		AO353_10815	0.54	-2.6
2,365,308	+		AO353_10815	0.54	+0.0
2,365,309	-		AO353_10815	0.54	-0.5
2,365,309	-		AO353_10815	0.54	-1.9
2,365,535	+		AO353_10815	0.85	-0.7
2,365,535	+		AO353_10815	0.85	-3.0
2,365,535	+		AO353_10815	0.85	-2.1
2,365,535	+		AO353_10815	0.85	+0.0
2,365,535	+		AO353_10815	0.85	-2.5
2,365,536	-		AO353_10815	0.85	-1.8
2,365,557	+		AO353_10815	0.88	-0.1
2,365,558	-		AO353_10815	0.88	-1.3
2,365,558	-		AO353_10815	0.88	-0.4
2,365,565	+		AO353_10815	0.89	-3.2
2,365,565	+		AO353_10815	0.89	-1.0
2,365,566	-		AO353_10815	0.89	-2.6
2,365,566	-		AO353_10815	0.89	-3.3
2,365,643	+				-1.8
2,365,643	+				+0.1
2,365,643	+				-0.3
2,365,643	+				-2.0
2,365,643	+				+0.0
2,365,644	-				-0.7
2,365,644	-				+0.7
2,365,644	-				-0.4
2,365,644	-				-1.0
2,365,644	-				-1.4
2,365,644	-				-3.0
2,365,653	+				-1.4
2,365,653	+				-0.9
2,365,654	-				-0.9
2,365,654	-				-0.5
2,365,654	-				-2.0
2,365,654	-				-2.6
2,365,654	-				-2.8
2,365,876	-				-1.7
2,365,949	+		AO353_10820	0.14	+0.0
2,365,950	-		AO353_10820	0.14	-1.6
2,366,086	+		AO353_10820	0.23	+0.7
2,366,087	-		AO353_10820	0.23	-0.5
2,366,087	-		AO353_10820	0.23	-0.7
2,366,132	+		AO353_10820	0.26	-0.9
2,366,132	+		AO353_10820	0.26	+0.4
2,366,132	+		AO353_10820	0.26	-1.0
2,366,132	+		AO353_10820	0.26	-0.1
2,366,132	+		AO353_10820	0.26	-0.1
2,366,132	+		AO353_10820	0.26	+0.5
2,366,132	+		AO353_10820	0.26	-0.2
2,366,132	+		AO353_10820	0.26	-1.6
2,366,132	+		AO353_10820	0.26	-0.9
2,366,132	+		AO353_10820	0.26	-0.1
2,366,132	+		AO353_10820	0.26	+0.1
2,366,132	+		AO353_10820	0.26	+0.4
2,366,132	+		AO353_10820	0.26	-1.7
2,366,132	+		AO353_10820	0.26	-0.9
2,366,132	+		AO353_10820	0.26	+0.1
2,366,132	+		AO353_10820	0.26	+1.0
2,366,132	+		AO353_10820	0.26	-0.9
2,366,132	+		AO353_10820	0.26	-0.3
2,366,132	+		AO353_10820	0.26	-0.4
2,366,133	-		AO353_10820	0.26	+0.2
2,366,133	-		AO353_10820	0.26	-1.4
2,366,133	-		AO353_10820	0.26	-0.1
2,366,133	-		AO353_10820	0.26	-1.6
2,366,133	-		AO353_10820	0.26	+0.5
2,366,133	-		AO353_10820	0.26	-1.9
2,366,133	-		AO353_10820	0.26	+0.0
2,366,133	-		AO353_10820	0.26	+0.1
2,366,133	-		AO353_10820	0.26	+0.2
2,366,157	+		AO353_10820	0.27	+2.0
2,366,319	+		AO353_10820	0.38	+0.5
2,366,319	+		AO353_10820	0.38	+0.0
2,366,319	+		AO353_10820	0.38	-1.0
2,366,320	-		AO353_10820	0.38	+0.2