Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08955

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
1,966,260	-		AO353_08945	0.81	-1.3
1,966,260	-		AO353_08945	0.81	+2.5
1,966,379	+		AO353_08945	0.87	-0.8
1,966,379	+		AO353_08945	0.87	+1.4
1,966,379	+		AO353_08945	0.87	+0.4
1,966,379	+		AO353_08945	0.87	+0.4
1,966,379	+		AO353_08945	0.87	+0.9
1,966,379	+		AO353_08945	0.87	-0.0
1,966,380	-		AO353_08945	0.87	-2.1
1,966,380	-		AO353_08945	0.87	+1.5
1,966,380	-		AO353_08945	0.87	-0.6
1,966,576	+				+0.8
1,966,576	+				-2.4
1,966,576	+				-0.6
1,966,577	-				+2.0
1,966,577	-				-0.2
1,966,577	-				+0.5
1,966,577	-				+0.8
1,966,600	+				+0.9
1,966,600	+				+0.2
1,966,600	+				+0.6
1,966,601	-				-0.2
1,966,626	+				+0.1
1,966,626	+				+1.2
1,966,626	+				-1.0
1,966,627	-				-0.2
1,966,627	-				-0.4
1,966,627	-				-0.3
1,966,627	-				+0.9
1,966,642	+				+1.3
1,966,642	+				+1.6
1,966,642	+				+0.9
1,966,643	-				+0.7
1,966,643	-				-1.1
1,966,670	+				+0.3
1,966,671	-				+0.7
1,966,671	-				+2.0
1,966,676	+				+1.2
1,966,676	+				-0.8
1,966,676	+				+0.3
1,966,676	+				+0.1
1,966,676	+				-0.4
1,966,676	+				+0.7
1,966,676	+				-0.5
1,966,676	+				-0.2
1,966,676	+				-0.1
1,966,676	+				-0.4
1,966,676	+				+0.1
1,966,676	+				+1.2
1,966,676	+				-0.1
1,966,676	+				-0.6
1,966,676	+				+0.5
1,966,676	+				-0.8
1,966,676	+				+1.8
1,966,676	+				+0.0
1,966,676	+				+0.6
1,966,676	+				-0.7
1,966,676	+				+0.4
1,966,676	+				-0.0
1,966,676	+				+0.0
1,966,676	+				-0.8
1,966,676	+				-1.1
1,966,677	-				-0.5
1,966,677	-				+2.0
1,966,677	-				+0.7
1,966,677	-				+0.7
1,966,677	-				+0.2
1,966,677	-				-0.3
1,966,677	-				-0.6
1,966,677	-				+0.7
1,966,677	-				+1.3
1,966,677	-				+1.3
1,966,677	-				-1.2
1,966,677	-				+0.3
1,966,677	-				+1.1
1,966,677	-				+0.4
1,966,677	-				-0.7
1,966,677	-				+5.7
1,966,677	-				-2.0
1,966,677	-				+0.3
1,966,677	-				-0.1
1,966,677	-				-0.1
1,966,677	-				+1.4
1,966,677	-				-1.7
1,966,713	+				+0.2
1,966,714	-				-0.4
1,966,714	-				-1.1
1,966,714	-				-0.1
1,966,943	+		AO353_08950	0.57	+0.0
1,966,943	+		AO353_08950	0.57	+0.0
1,966,943	+		AO353_08950	0.57	+2.6
1,966,943	+		AO353_08950	0.57	+0.1
1,966,943	+		AO353_08950	0.57	-0.5
1,966,943	+		AO353_08950	0.57	+1.2
1,966,943	+		AO353_08950	0.57	+0.6
1,966,943	+		AO353_08950	0.57	+1.0
1,966,943	+		AO353_08950	0.57	+0.8
1,966,943	+		AO353_08950	0.57	+0.4
1,966,943	+		AO353_08950	0.57	-1.9
1,966,944	-		AO353_08950	0.57	-1.1
1,966,944	-		AO353_08950	0.57	+1.4
1,966,944	-		AO353_08950	0.57	-1.9
1,966,944	-		AO353_08950	0.57	-0.8
1,966,944	-		AO353_08950	0.57	-0.3
1,966,944	-		AO353_08950	0.57	+0.4
1,966,944	-		AO353_08950	0.57	-0.2
1,966,944	-		AO353_08950	0.57	-1.2
1,967,139	+				+0.3
1,967,139	+				-0.6
1,967,139	+				+1.3
1,967,139	+				-0.8
1,967,139	+				+0.4
1,967,139	+				-2.0
1,967,139	+				+1.3
1,967,140	-				-0.9
1,967,140	-				+0.8
1,967,140	-				+0.9
1,967,164	+				+0.5
1,967,164	+				-0.3
1,967,164	+				+0.2
1,967,164	+				+2.5
1,967,165	-				-1.2
1,967,165	-				+0.9
1,967,165	-				+0.2
1,967,165	-				+0.6
1,967,171	+				+1.7
1,967,171	+				+1.9
1,967,171	+				+0.0
1,967,172	-				+0.8
1,967,187	-				-0.5
1,967,432	-		AO353_08955	0.27	-1.7
1,967,432	-		AO353_08955	0.27	+2.7
1,967,509	+		AO353_08955	0.34	+1.1
1,967,629	+		AO353_08955	0.45	-0.6
1,967,629	+		AO353_08955	0.45	-2.1
1,967,629	+		AO353_08955	0.45	+1.4
1,967,630	-		AO353_08955	0.45	+1.6
1,967,630	-		AO353_08955	0.45	-0.5
1,967,630	-		AO353_08955	0.45	+0.9
1,967,879	-		AO353_08955	0.68	-0.3
1,967,931	+		AO353_08955	0.72	+0.3
1,967,931	+		AO353_08955	0.72	+0.2
1,967,931	+		AO353_08955	0.72	+0.8
1,967,931	+		AO353_08955	0.72	-1.4
1,967,931	+		AO353_08955	0.72	-0.9
1,967,931	+		AO353_08955	0.72	+0.0
1,967,931	+		AO353_08955	0.72	-0.0
1,967,931	+		AO353_08955	0.72	+1.9
1,967,931	+		AO353_08955	0.72	+1.8
1,967,932	-		AO353_08955	0.73	-0.6
1,967,932	-		AO353_08955	0.73	+1.8
1,967,932	-		AO353_08955	0.73	+0.2
1,967,932	-		AO353_08955	0.73	+0.6
1,967,932	-		AO353_08955	0.73	+0.8
1,968,191	+				+0.6
1,968,191	+				-0.3
1,968,191	+				+0.4
1,968,191	+				-1.1
1,968,191	+				+1.8
1,968,191	+				+0.7
1,968,191	+				+1.8
1,968,192	-				+0.9
1,968,192	-				-0.5
1,968,192	-				+1.3
1,968,192	-				+1.6
1,968,205	+				+0.7
1,968,205	+				+0.5
1,968,205	+				-1.1
1,968,205	+				-0.6
1,968,205	+				-0.1
1,968,205	+				+0.5
1,968,205	+				-0.6
1,968,206	-				-0.4
1,968,206	-				-1.0
1,968,206	-				+0.2
1,968,206	-				+1.4
1,968,206	-				+0.6
1,968,209	+				+0.2
1,968,209	+				-0.0
1,968,209	+				-1.5
1,968,209	+				-0.4
1,968,209	+				+0.2
1,968,210	-				+0.4
1,968,210	-				+0.3
1,968,210	-				+0.9
1,968,210	-				-0.0
1,968,210	-				+0.2
1,968,221	-				+0.2
1,968,221	-				+0.2
1,968,221	-				+0.5
1,968,221	-				-0.1
1,968,221	-				+0.6
1,968,221	-				-0.7
1,968,221	-				-0.1
1,968,237	+				-0.3
1,968,238	-				-0.8
1,968,238	-				-1.4
1,968,238	-				+0.9
1,968,266	+				-1.8
1,968,266	+				+0.2
1,968,266	+				-0.1
1,968,266	+				-0.1
1,968,267	-				-0.3
1,968,267	-				-0.1
1,968,267	-				-0.3
1,968,267	-				+0.1
1,968,267	-				+0.1
1,968,267	-				+0.3
1,968,269	+				+0.4
1,968,269	+				+2.0
1,968,269	+				+2.3
1,968,269	+				+1.4
1,968,269	+				+0.3
1,968,269	+				-1.5
1,968,269	+				-1.5
1,968,269	+				-0.6
1,968,269	+				+0.2
1,968,269	+				-0.7
1,968,269	+				+0.0
1,968,269	+				+1.0
1,968,269	+				-0.8
1,968,270	-				+1.2
1,968,270	-				-1.1
1,968,270	-				-0.4
1,968,270	-				+0.9
1,968,270	-				-0.5
1,968,270	-				-1.5
1,968,270	-				-0.8
1,968,270	-				-1.3
1,968,270	-				-0.1
1,968,270	-				+0.7
1,968,270	-				+1.0
1,968,270	-				+1.2
1,968,270	-				-1.5
1,968,270	-				-2.5
1,968,270	-				-0.1
1,968,270	-				-0.5
1,968,356	+				-1.1
1,968,356	+				-0.2
1,968,356	+				-0.3
1,968,356	+				+1.5
1,968,356	+				+0.3
1,968,356	+				+0.9
1,968,356	+				+0.1
1,968,356	+				-0.4
1,968,393	+				+0.7
1,968,393	+				+0.7
1,968,393	+				-0.0
1,968,393	+				+1.4
1,968,393	+				+0.6
1,968,393	+				+0.6
1,968,393	+				-0.1
1,968,394	-				-0.7
1,968,394	-				-0.7
1,968,394	-				-1.0
1,968,444	+				+0.2
1,968,518	+		AO353_08960	0.14	+0.9
1,968,519	-		AO353_08960	0.14	+1.9
1,968,519	-		AO353_08960	0.14	+2.2
1,968,608	+		AO353_08960	0.27	-0.3
1,968,608	+		AO353_08960	0.27	-0.7
1,968,608	+		AO353_08960	0.27	-1.6
1,968,608	+		AO353_08960	0.27	+1.0
1,968,608	+		AO353_08960	0.27	+0.4
1,968,609	-		AO353_08960	0.28	-0.3
1,968,854	+		AO353_08960	0.64	+0.1
1,968,854	+		AO353_08960	0.64	+1.9
1,968,854	+		AO353_08960	0.64	+1.3
1,968,854	+		AO353_08960	0.64	-0.1
1,968,854	+		AO353_08960	0.64	+1.0
1,968,855	-		AO353_08960	0.65	-1.1
1,968,855	-		AO353_08960	0.65	-1.1
1,968,855	-		AO353_08960	0.65	+0.6
1,968,855	-		AO353_08960	0.65	-1.3
1,969,007	+		AO353_08960	0.87	+1.4
1,969,008	-		AO353_08960	0.88	-0.1
1,969,008	-		AO353_08960	0.88	-0.3
1,969,144	+				-0.6
1,969,144	+				+1.0
1,969,144	+				-0.1
1,969,144	+				+1.5
1,969,144	+				-0.1
1,969,144	+				+0.1
1,969,144	+				+1.0
1,969,145	-				+0.0
1,969,145	-				-0.2
1,969,145	-				+0.4
1,969,145	-				-1.4
1,969,145	-				+0.4
1,969,145	-				-0.1
1,969,145	-				+0.7