Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00565

Experiment: acetate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate (C)
117,139	+		AO353_00560	0.28	-1.2
117,139	+		AO353_00560	0.28	+0.0
117,140	-		AO353_00560	0.28	-1.2
117,140	-		AO353_00560	0.28	-0.3
117,140	-		AO353_00560	0.28	-0.7
117,403	+		AO353_00560	0.53	-1.4
117,427	+		AO353_00560	0.55	+0.5
117,427	+		AO353_00560	0.55	+0.1
117,427	+		AO353_00560	0.55	+2.0
117,428	-		AO353_00560	0.55	-0.2
117,428	-		AO353_00560	0.55	-0.2
117,428	-		AO353_00560	0.55	+0.0
117,592	+		AO353_00560	0.70	+0.6
117,611	+		AO353_00560	0.72	+0.5
117,612	-		AO353_00560	0.72	+0.0
117,612	-		AO353_00560	0.72	-0.1
117,817	-				+0.3
117,895	+				-0.2
117,895	+				+0.5
117,895	+				+1.0
117,896	-				+0.8
117,896	-				+0.3
117,896	-				+0.8
117,914	+				+0.9
117,914	+				-1.0
117,914	+				+0.1
117,914	+				-0.7
117,915	-				-0.2
118,003	+				+0.9
118,047	+				-0.9
118,047	+				+0.7
118,048	-				-0.2
118,048	-				-1.3
118,053	+				-0.9
118,053	+				-0.7
118,053	+				-0.0
118,054	-				-0.9
118,054	-				-0.0
118,054	-				+0.5
118,070	+				-0.1
118,070	+				-0.1
118,071	-				+1.3
118,075	+				-1.2
118,076	-				-2.1
118,162	+				+1.8
118,162	+				-1.3
118,163	-				+0.5
118,163	-				+0.5
118,163	-				-0.5
118,176	+				-0.5
118,177	-				-1.4
118,190	+				+0.1
118,191	-				+1.1
118,191	-				-0.7
118,191	-				-0.3
118,191	-				+0.5
118,191	-				-1.7
118,196	+				+2.4
118,196	+				+0.9
118,196	+				-1.6
118,197	-				-0.0
118,197	-				-0.8
118,197	-				-0.9
118,197	-				+1.0
118,588	+		AO353_00565	0.17	-1.3
118,589	-		AO353_00565	0.17	-0.6
118,589	-		AO353_00565	0.17	-0.6
118,602	-		AO353_00565	0.17	-0.5
118,602	-		AO353_00565	0.17	-0.3
118,691	+		AO353_00565	0.20	-1.2
118,691	+		AO353_00565	0.20	+0.1
118,691	+		AO353_00565	0.20	-1.0
118,691	+		AO353_00565	0.20	-0.7
118,691	+		AO353_00565	0.20	-0.6
118,692	-		AO353_00565	0.20	-0.5
118,692	-		AO353_00565	0.20	-0.3
118,736	+		AO353_00565	0.22	-2.0
118,736	+		AO353_00565	0.22	-1.3
118,736	+		AO353_00565	0.22	-1.0
118,736	+		AO353_00565	0.22	-0.0
118,736	+		AO353_00565	0.22	-0.6
118,736	+		AO353_00565	0.22	-1.3
118,736	+		AO353_00565	0.22	-0.7
118,736	+		AO353_00565	0.22	+0.7
118,736	+		AO353_00565	0.22	+1.5
118,736	+		AO353_00565	0.22	-1.9
118,736	+		AO353_00565	0.22	+1.1
118,736	+		AO353_00565	0.22	-1.2
118,736	+		AO353_00565	0.22	-1.0
118,736	+		AO353_00565	0.22	+0.3
118,737	-		AO353_00565	0.22	-0.5
118,737	-		AO353_00565	0.22	+1.3
118,737	-		AO353_00565	0.22	+1.0
118,737	-		AO353_00565	0.22	+0.9
118,737	-		AO353_00565	0.22	-1.4
118,737	-		AO353_00565	0.22	-0.6
118,737	-		AO353_00565	0.22	-0.0
118,737	-		AO353_00565	0.22	-0.1
118,800	+		AO353_00565	0.24	+0.5
118,801	-		AO353_00565	0.24	+1.8
118,801	-		AO353_00565	0.24	+0.1
118,995	-		AO353_00565	0.31	+0.6
119,108	+		AO353_00565	0.35	+0.3
119,108	+		AO353_00565	0.35	+0.6
119,109	-		AO353_00565	0.35	-0.0
119,159	+		AO353_00565	0.37	+0.9
119,435	+		AO353_00565	0.47	-0.3
119,435	+		AO353_00565	0.47	+1.8
119,441	+		AO353_00565	0.48	+0.1
119,442	-		AO353_00565	0.48	-0.7
119,442	-		AO353_00565	0.48	-0.4
119,633	+		AO353_00565	0.55	-0.0
119,634	-		AO353_00565	0.55	-0.2
119,636	+		AO353_00565	0.55	+0.3
119,636	+		AO353_00565	0.55	-0.0
119,636	+		AO353_00565	0.55	+0.1
119,636	+		AO353_00565	0.55	+1.2
119,636	+		AO353_00565	0.55	-0.0
119,636	+		AO353_00565	0.55	+0.1
119,636	+		AO353_00565	0.55	+0.7
119,636	+		AO353_00565	0.55	-0.5
119,636	+		AO353_00565	0.55	+0.4
119,636	+		AO353_00565	0.55	+0.4
119,636	+		AO353_00565	0.55	-0.6
119,636	+		AO353_00565	0.55	-1.8
119,636	+		AO353_00565	0.55	-0.8
119,636	+		AO353_00565	0.55	-0.1
119,637	-		AO353_00565	0.55	-1.7
119,637	-		AO353_00565	0.55	+0.3
119,637	-		AO353_00565	0.55	+0.9
119,637	-		AO353_00565	0.55	-1.0
119,637	-		AO353_00565	0.55	-0.4
119,637	-		AO353_00565	0.55	-0.1
119,660	+		AO353_00565	0.56	-1.0
119,661	-		AO353_00565	0.56	-1.2
119,661	-		AO353_00565	0.56	+0.8
119,870	+		AO353_00565	0.63	-1.5
119,916	+		AO353_00565	0.65	+0.2
119,917	-		AO353_00565	0.65	+0.4
119,945	+		AO353_00565	0.66	+0.6
119,945	+		AO353_00565	0.66	+1.0
119,945	+		AO353_00565	0.66	-0.8
119,945	+		AO353_00565	0.66	-0.5
119,946	-		AO353_00565	0.66	-0.2
119,946	-		AO353_00565	0.66	-1.6
119,946	-		AO353_00565	0.66	+2.7
120,026	+		AO353_00565	0.69	-1.7
120,027	-		AO353_00565	0.69	-0.4
120,089	+		AO353_00565	0.71	+0.7
120,089	+		AO353_00565	0.71	+1.2
120,089	+		AO353_00565	0.71	-0.9
120,089	+		AO353_00565	0.71	-2.1
120,089	+		AO353_00565	0.71	+0.5
120,089	+		AO353_00565	0.71	+0.6
120,090	-		AO353_00565	0.71	-1.3
120,090	-		AO353_00565	0.71	-0.2
120,090	-		AO353_00565	0.71	+1.1
120,090	-		AO353_00565	0.71	-2.4
120,090	-		AO353_00565	0.71	+0.6
120,090	-		AO353_00565	0.71	-0.1
120,113	+		AO353_00565	0.72	+0.8
120,113	+		AO353_00565	0.72	-1.2
120,113	+		AO353_00565	0.72	+1.1
120,113	+		AO353_00565	0.72	-0.7
120,113	+		AO353_00565	0.72	-0.9
120,113	+		AO353_00565	0.72	-0.3
120,114	-		AO353_00565	0.72	-0.1
120,114	-		AO353_00565	0.72	-1.1
120,114	-		AO353_00565	0.72	-0.9
120,114	-		AO353_00565	0.72	+0.3
120,114	-		AO353_00565	0.72	-0.2
120,189	+		AO353_00565	0.75	-0.1
120,189	+		AO353_00565	0.75	-1.0
120,190	-		AO353_00565	0.75	+0.3
120,190	-		AO353_00565	0.75	+0.8
120,272	+		AO353_00565	0.78	-2.1
120,314	+		AO353_00565	0.79	+2.5
120,314	+		AO353_00565	0.79	+0.4
120,314	+		AO353_00565	0.79	+0.7
120,314	+		AO353_00565	0.79	-0.8
120,314	+		AO353_00565	0.79	-0.0
120,315	-		AO353_00565	0.79	+0.1
120,315	-		AO353_00565	0.79	-0.4
120,315	-		AO353_00565	0.79	+0.5
120,315	-		AO353_00565	0.79	+0.6
120,315	-		AO353_00565	0.79	-2.2
120,412	+		AO353_00565	0.83	+0.5
120,412	+		AO353_00565	0.83	-0.3
120,412	+		AO353_00565	0.83	-1.0
120,412	+		AO353_00565	0.83	+1.4
120,412	+		AO353_00565	0.83	+1.0
120,413	-		AO353_00565	0.83	+0.5
120,413	-		AO353_00565	0.83	+0.1
120,413	-		AO353_00565	0.83	+2.1
120,419	+		AO353_00565	0.83	-0.4
120,419	+		AO353_00565	0.83	-1.5
120,419	+		AO353_00565	0.83	+0.0
120,419	+		AO353_00565	0.83	-0.4
120,420	-		AO353_00565	0.83	-1.0
120,420	-		AO353_00565	0.83	-0.5
120,420	-		AO353_00565	0.83	-0.5
120,420	-		AO353_00565	0.83	+1.1
120,420	-		AO353_00565	0.83	-1.3
120,420	-		AO353_00565	0.83	+2.0
120,449	+		AO353_00565	0.84	-0.7
120,449	+		AO353_00565	0.84	+0.3
120,449	+		AO353_00565	0.84	-1.5
120,449	+		AO353_00565	0.84	+1.1
120,450	-		AO353_00565	0.84	-0.4
120,450	-		AO353_00565	0.84	+0.3
120,513	-		AO353_00565	0.87	-0.9
120,513	-		AO353_00565	0.87	-2.2
120,526	+		AO353_00565	0.87	-0.5
120,526	+		AO353_00565	0.87	+1.7
120,551	-		AO353_00565	0.88	+0.8
120,630	+				-0.7
120,630	+				-0.2
120,630	+				+1.5
120,631	-				-2.5
120,631	-				+1.3
120,631	-				+0.7
120,634	-				+0.3
120,634	-				-1.3
120,827	+				-0.1
120,828	-				+0.2
120,828	-				+1.3
120,828	-				-0.2
120,828	-				-0.2
120,828	-				-0.7
120,828	-				-0.5
120,828	-				-2.0
120,828	-				+0.4
120,854	+				+1.0
120,854	+				-0.4
120,854	+				-0.5
120,854	+				-1.0
120,854	+				+1.3
120,854	+				+1.0
120,854	+				-0.0
120,854	+				+0.6
120,854	+				-0.3
120,854	+				-0.6
120,854	+				+0.5
120,854	+				+0.4
120,855	-				-0.4
120,855	-				-0.1
120,855	-				+0.7
120,855	-				-0.9
120,855	-				+0.2
120,855	-				+0.5
120,881	+				-1.2
120,881	+				-0.9
120,881	+				-1.8
120,881	+				-0.4
120,882	-				-1.4
120,882	-				+0.4
120,882	-				+0.5
120,882	-				+0.1
120,947	-				-0.0
121,029	+				+1.2
121,029	+				+0.1
121,029	+				+2.2
121,029	+				-1.1
121,030	-				-0.6
121,030	-				-0.0
121,053	+				-0.5
121,071	+				-0.5
121,071	+				+0.5
121,071	+				-1.0
121,071	+				-0.4
121,071	+				+0.3
121,071	+				-0.4
121,071	+				-0.2
121,072	-				-0.6
121,115	-		AO353_00570	0.14	+0.1
121,231	-		AO353_00570	0.28	-0.7
121,231	-		AO353_00570	0.28	-1.7
121,231	-		AO353_00570	0.28	-0.1
121,231	-		AO353_00570	0.28	-0.1
121,231	-		AO353_00570	0.28	-0.4
121,290	+		AO353_00570	0.36	+0.7
121,290	+		AO353_00570	0.36	+0.2
121,290	+		AO353_00570	0.36	-0.6
121,290	+		AO353_00570	0.36	+0.5
121,291	-		AO353_00570	0.36	-1.1
121,291	-		AO353_00570	0.36	+1.4
121,380	+		AO353_00570	0.47	+0.4
121,380	+		AO353_00570	0.47	-0.3
121,380	+		AO353_00570	0.47	+0.3
121,380	+		AO353_00570	0.47	-0.3
121,380	+		AO353_00570	0.47	+0.5
121,380	+		AO353_00570	0.47	+0.4
121,381	-		AO353_00570	0.47	-0.2
121,381	-		AO353_00570	0.47	-0.2
121,381	-		AO353_00570	0.47	-1.4
121,381	-		AO353_00570	0.47	-0.0
121,381	-		AO353_00570	0.47	-0.4
121,446	-		AO353_00570	0.55	+0.7
121,446	-		AO353_00570	0.55	+1.5
121,446	-		AO353_00570	0.55	-1.0
121,546	-		AO353_00570	0.68	+0.3
121,546	-		AO353_00570	0.68	-0.2
121,663	+		AO353_00570	0.83	+0.3
121,664	-		AO353_00570	0.83	+1.8
121,776	-				-0.9
121,776	-				+0.4
121,776	-				+1.5
121,780	-				+0.1
121,805	+				+0.5
121,805	+				-0.7
121,806	-				+1.4
121,806	-				+1.0
121,806	-				-1.1
121,806	-				-1.8
121,850	+				+0.5
121,851	-				+1.3
121,851	-				+0.8