Strain Fitness in Pantoea sp. MT58 around IAI47_21850

Experiment: Defined media control, anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Defined media control, anaerobic
119,170	+		IAI47_21845	0.21	+0.9
119,262	+		IAI47_21845	0.29	-0.3
119,262	+		IAI47_21845	0.29	+0.4
119,365	+		IAI47_21845	0.38	-1.5
119,366	-		IAI47_21845	0.38	+2.2
119,366	-		IAI47_21845	0.38	+2.6
119,366	-		IAI47_21845	0.38	-0.9
119,366	-		IAI47_21845	0.38	+0.2
119,401	+		IAI47_21845	0.41	+1.1
119,401	+		IAI47_21845	0.41	+1.2
119,402	-		IAI47_21845	0.41	-0.5
119,489	+		IAI47_21845	0.48	+1.5
119,490	-		IAI47_21845	0.48	+0.2
119,580	+		IAI47_21845	0.56	+0.6
119,581	-		IAI47_21845	0.56	-0.3
119,581	-		IAI47_21845	0.56	-0.1
119,581	-		IAI47_21845	0.56	-1.0
119,607	+		IAI47_21845	0.58	+3.6
119,607	+		IAI47_21845	0.58	-0.1
119,607	+		IAI47_21845	0.58	+2.6
119,607	+		IAI47_21845	0.58	+0.3
119,607	+		IAI47_21845	0.58	+0.2
119,607	+		IAI47_21845	0.58	+0.7
119,607	+		IAI47_21845	0.58	-0.0
119,607	+		IAI47_21845	0.58	-0.5
119,607	+		IAI47_21845	0.58	+1.2
119,607	+		IAI47_21845	0.58	-0.1
119,608	-		IAI47_21845	0.58	-0.3
119,608	-		IAI47_21845	0.58	+0.6
119,608	-		IAI47_21845	0.58	+1.5
119,608	-		IAI47_21845	0.58	-1.1
119,608	-		IAI47_21845	0.58	+0.0
119,608	-		IAI47_21845	0.58	-0.7
119,608	-		IAI47_21845	0.58	+1.3
119,608	-		IAI47_21845	0.58	+0.5
119,608	-		IAI47_21845	0.58	+0.9
119,610	+		IAI47_21845	0.58	+1.8
119,611	-		IAI47_21845	0.58	-1.4
119,611	-		IAI47_21845	0.58	+0.2
119,611	-		IAI47_21845	0.58	+0.5
119,611	-		IAI47_21845	0.58	-0.0
119,647	+		IAI47_21845	0.61	-0.5
119,647	+		IAI47_21845	0.61	+0.5
119,647	+		IAI47_21845	0.61	+1.5
119,647	+		IAI47_21845	0.61	-1.0
119,647	+		IAI47_21845	0.61	+1.4
119,647	+		IAI47_21845	0.61	+0.9
119,648	-		IAI47_21845	0.61	-1.4
119,648	-		IAI47_21845	0.61	+0.2
119,648	-		IAI47_21845	0.61	+1.9
119,648	-		IAI47_21845	0.61	-0.6
119,736	+		IAI47_21845	0.69	+1.1
119,736	+		IAI47_21845	0.69	-1.4
119,736	+		IAI47_21845	0.69	-1.5
119,736	+		IAI47_21845	0.69	+1.8
119,737	-		IAI47_21845	0.69	+1.3
119,737	-		IAI47_21845	0.69	+1.2
119,758	+		IAI47_21845	0.71	-0.7
119,778	-		IAI47_21845	0.72	+2.1
119,799	+		IAI47_21845	0.74	+2.8
119,799	+		IAI47_21845	0.74	+1.6
119,799	+		IAI47_21845	0.74	-0.4
119,799	+		IAI47_21845	0.74	+1.9
119,800	-		IAI47_21845	0.74	+2.2
119,800	-		IAI47_21845	0.74	-0.5
119,800	-		IAI47_21845	0.74	+0.2
119,800	-		IAI47_21845	0.74	-0.4
119,800	-		IAI47_21845	0.74	-0.4
119,860	+		IAI47_21845	0.79	+0.8
119,860	+		IAI47_21845	0.79	-1.9
119,860	+		IAI47_21845	0.79	+0.9
119,861	-		IAI47_21845	0.79	+0.2
119,861	-		IAI47_21845	0.79	+2.6
119,877	+		IAI47_21845	0.81	+0.8
119,881	+		IAI47_21845	0.81	-0.6
119,881	+		IAI47_21845	0.81	+0.1
119,882	-		IAI47_21845	0.81	+0.0
119,882	-		IAI47_21845	0.81	+1.3
119,882	-		IAI47_21845	0.81	+0.0
119,882	-		IAI47_21845	0.81	-0.3
119,991	+				+0.3
119,991	+				-1.3
119,992	-				+1.5
119,992	-				+2.2
120,003	+				-0.7
120,003	+				+2.1
120,003	+				+2.2
120,003	+				+0.3
120,003	+				-0.1
120,004	-				+1.6
120,004	-				-0.8
120,004	-				-0.1
120,004	-				+3.8
120,004	-				+1.6
120,004	-				+3.2
120,004	-				+2.6
120,004	-				+3.2
120,004	-				-0.3
120,004	-				-0.1
120,004	-				+1.4
120,006	+				-0.1
120,007	-				-0.7
120,007	-				+1.5
120,007	-				+0.2
120,073	-				+0.6
120,109	+				+1.6
120,109	+				-1.7
120,109	+				-1.2
120,110	-				-0.4
120,110	-				-1.4
120,110	-				-0.8
120,110	-				+0.9
120,110	-				+0.7
120,110	-				+0.4
120,114	+				-0.4
120,114	+				+4.7
120,114	+				+2.7
120,114	+				+2.0
120,114	+				+1.6
120,114	+				-0.5
120,114	+				+1.2
120,115	-				-0.0
120,115	-				-0.2
120,115	-				+1.2
120,115	-				+2.0
120,115	-				-1.0
120,160	+				-1.6
120,160	+				+0.3
120,160	+				+1.9
120,161	-				+1.4
120,161	-				+0.1
120,172	+				-0.6
120,172	+				+0.6
120,172	+				+0.5
120,185	-				+0.2
120,220	+				+0.9
120,220	+				+1.6
120,220	+				-0.8
120,221	-				+0.5
120,221	-				+2.9
120,221	-				+0.5
120,221	-				+0.1
120,221	-				-1.4
120,260	+		IAI47_21850	0.12	-1.1
120,260	+		IAI47_21850	0.12	+0.4
120,265	+		IAI47_21850	0.12	+0.5
120,266	-		IAI47_21850	0.13	-1.3
120,291	+		IAI47_21850	0.15	-0.3
120,291	+		IAI47_21850	0.15	+1.4
120,291	+		IAI47_21850	0.15	-0.6
120,292	-		IAI47_21850	0.15	+0.7
120,297	+		IAI47_21850	0.16	+0.2
120,297	+		IAI47_21850	0.16	+0.4
120,297	+		IAI47_21850	0.16	+1.8
120,298	-		IAI47_21850	0.16	+1.1
120,298	-		IAI47_21850	0.16	-0.3
120,298	-		IAI47_21850	0.16	+1.7
120,298	-		IAI47_21850	0.16	+3.7
120,298	-		IAI47_21850	0.16	+1.4
120,298	-		IAI47_21850	0.16	+0.6
120,343	+		IAI47_21850	0.20	+0.9
120,343	+		IAI47_21850	0.20	+1.4
120,343	+		IAI47_21850	0.20	+3.2
120,343	+		IAI47_21850	0.20	-0.4
120,343	+		IAI47_21850	0.20	+0.9
120,343	+		IAI47_21850	0.20	+2.1
120,343	+		IAI47_21850	0.20	+1.3
120,343	+		IAI47_21850	0.20	+0.6
120,344	-		IAI47_21850	0.20	-0.1
120,344	-		IAI47_21850	0.20	+3.2
120,344	-		IAI47_21850	0.20	-0.5
120,358	-		IAI47_21850	0.22	-0.9
120,358	-		IAI47_21850	0.22	+1.4
120,427	+		IAI47_21850	0.29	-0.6
120,451	-		IAI47_21850	0.31	+0.5
120,468	+		IAI47_21850	0.33	+1.4
120,468	+		IAI47_21850	0.33	+0.0
120,468	+		IAI47_21850	0.33	+1.1
120,468	+		IAI47_21850	0.33	-0.5
120,468	+		IAI47_21850	0.33	+1.2
120,468	+		IAI47_21850	0.33	+0.0
120,469	-		IAI47_21850	0.33	-0.3
120,469	-		IAI47_21850	0.33	+1.6
120,469	-		IAI47_21850	0.33	+1.0
120,469	-		IAI47_21850	0.33	+1.0
120,469	-		IAI47_21850	0.33	-0.7
120,469	-		IAI47_21850	0.33	-0.1
120,473	-		IAI47_21850	0.33	+0.1
120,473	-		IAI47_21850	0.33	-0.4
120,473	-		IAI47_21850	0.33	+0.6
120,481	+		IAI47_21850	0.34	-0.6
120,482	-		IAI47_21850	0.34	+3.5
120,581	-		IAI47_21850	0.44	+0.7
120,581	-		IAI47_21850	0.44	+1.2
120,581	-		IAI47_21850	0.44	-0.5
120,581	-		IAI47_21850	0.44	+0.8
120,585	+		IAI47_21850	0.44	-1.1
120,585	+		IAI47_21850	0.44	+0.3
120,585	+		IAI47_21850	0.44	-0.4
120,585	+		IAI47_21850	0.44	+0.0
120,585	+		IAI47_21850	0.44	+1.0
120,585	+		IAI47_21850	0.44	+0.0
120,586	-		IAI47_21850	0.44	+0.9
120,586	-		IAI47_21850	0.44	+0.9
120,586	-		IAI47_21850	0.44	+2.2
120,586	-		IAI47_21850	0.44	-0.3
120,634	+		IAI47_21850	0.49	+1.2
120,634	+		IAI47_21850	0.49	+0.4
120,634	+		IAI47_21850	0.49	-1.2
120,641	+		IAI47_21850	0.50	+0.4
120,670	+		IAI47_21850	0.53	+0.2
120,670	+		IAI47_21850	0.53	-0.6
120,670	+		IAI47_21850	0.53	-1.2
120,670	+		IAI47_21850	0.53	-1.0
120,670	+		IAI47_21850	0.53	+0.4
120,670	+		IAI47_21850	0.53	-0.3
120,670	+		IAI47_21850	0.53	-0.5
120,670	+		IAI47_21850	0.53	+0.5
120,671	-		IAI47_21850	0.53	+1.8
120,671	-		IAI47_21850	0.53	-1.4
120,671	-		IAI47_21850	0.53	-1.0
120,671	-		IAI47_21850	0.53	+2.2
120,671	-		IAI47_21850	0.53	+2.9
120,671	-		IAI47_21850	0.53	+2.2
120,671	-		IAI47_21850	0.53	-2.2
120,671	-		IAI47_21850	0.53	+2.7
120,673	+		IAI47_21850	0.53	+0.8
120,673	+		IAI47_21850	0.53	+1.0
120,673	+		IAI47_21850	0.53	+0.9
120,673	+		IAI47_21850	0.53	+0.7
120,673	+		IAI47_21850	0.53	-0.1
120,673	+		IAI47_21850	0.53	-0.8
120,674	-		IAI47_21850	0.53	+2.2
120,674	-		IAI47_21850	0.53	+0.5
120,674	-		IAI47_21850	0.53	-0.3
120,674	-		IAI47_21850	0.53	+2.0
120,729	+		IAI47_21850	0.59	-1.0
120,729	+		IAI47_21850	0.59	+2.2
120,729	+		IAI47_21850	0.59	+0.7
120,729	+		IAI47_21850	0.59	-0.2
120,729	+		IAI47_21850	0.59	+0.0
120,729	+		IAI47_21850	0.59	-0.3
120,729	+		IAI47_21850	0.59	+1.0
120,729	+		IAI47_21850	0.59	-0.1
120,729	+		IAI47_21850	0.59	+1.7
120,730	-		IAI47_21850	0.59	-0.1
120,730	-		IAI47_21850	0.59	-0.5
120,730	-		IAI47_21850	0.59	+0.0
120,730	-		IAI47_21850	0.59	-1.0
120,730	-		IAI47_21850	0.59	+1.4
120,730	-		IAI47_21850	0.59	+1.5
120,730	-		IAI47_21850	0.59	-0.0
120,730	-		IAI47_21850	0.59	-1.3
120,748	+		IAI47_21850	0.60	+1.0
120,749	-		IAI47_21850	0.61	+1.3
120,749	-		IAI47_21850	0.61	-0.3
120,749	-		IAI47_21850	0.61	-0.8
120,749	-		IAI47_21850	0.61	+1.6
120,910	+		IAI47_21850	0.77	+0.9
120,940	+		IAI47_21850	0.80	+0.7
120,940	+		IAI47_21850	0.80	-1.1
120,940	+		IAI47_21850	0.80	-0.3
120,940	+		IAI47_21850	0.80	-0.1
120,941	-		IAI47_21850	0.80	+1.5
120,941	-		IAI47_21850	0.80	+0.5
120,941	-		IAI47_21850	0.80	-1.7
120,987	+		IAI47_21850	0.84	-0.2
120,987	+		IAI47_21850	0.84	-2.1
120,987	+		IAI47_21850	0.84	+2.5
120,988	-		IAI47_21850	0.84	-0.1
121,009	+		IAI47_21850	0.86	-0.2
121,009	+		IAI47_21850	0.86	+1.1
121,009	+		IAI47_21850	0.86	+1.5
121,009	+		IAI47_21850	0.86	+0.0
121,010	-		IAI47_21850	0.87	-0.9
121,010	-		IAI47_21850	0.87	+0.9
121,010	-		IAI47_21850	0.87	+0.0
121,010	-		IAI47_21850	0.87	+0.4
121,044	-				-0.5
121,120	+				-0.9
121,120	+				+0.1
121,120	+				+1.5
121,120	+				-1.0
121,120	+				+0.6
121,121	-				+1.2
121,121	-				+3.6
121,121	-				+1.9
121,124	-				+2.3
121,124	-				-0.7
121,124	-				+2.4
121,124	-				+1.7
121,124	-				+2.2
121,171	+				+1.2
121,171	+				+0.7
121,172	-				+0.2
121,172	-				+0.6
121,175	+				+1.2
121,175	+				-0.1
121,175	+				+0.1
121,175	+				-1.2
121,175	+				-0.1
121,176	-				-0.7
121,176	-				+0.8
121,176	-				+3.8
121,176	-				-1.9
121,176	-				+0.3
121,176	-				-0.6
121,180	+				+0.0
121,181	-				+0.7
121,181	-				+2.7
121,181	-				+0.5
121,266	-				-1.9
121,266	-				+1.0
121,272	+				+0.8
121,272	+				-0.3
121,272	+				+1.6
121,273	-				+0.2
121,344	+		IAI47_21855	0.12	+1.3
121,367	+		IAI47_21855	0.14	-0.7
121,367	+		IAI47_21855	0.14	+0.7
121,367	+		IAI47_21855	0.14	+0.7
121,367	+		IAI47_21855	0.14	+1.6
121,368	-		IAI47_21855	0.14	+1.2
121,368	-		IAI47_21855	0.14	-0.6
121,368	-		IAI47_21855	0.14	+0.8
121,368	-		IAI47_21855	0.14	+1.2
121,368	-		IAI47_21855	0.14	+0.7
121,440	+		IAI47_21855	0.19	+0.2
121,506	+		IAI47_21855	0.24	-0.9
121,506	+		IAI47_21855	0.24	-0.3
121,506	+		IAI47_21855	0.24	+1.5
121,507	-		IAI47_21855	0.24	-0.4
121,507	-		IAI47_21855	0.24	+1.9
121,507	-		IAI47_21855	0.24	+0.6
121,507	-		IAI47_21855	0.24	+1.8
121,533	+		IAI47_21855	0.25	-0.4
121,533	+		IAI47_21855	0.25	+1.6
121,533	+		IAI47_21855	0.25	+1.3
121,534	-		IAI47_21855	0.26	-0.3
121,534	-		IAI47_21855	0.26	-0.8
121,534	-		IAI47_21855	0.26	+1.2
121,534	-		IAI47_21855	0.26	-1.7
121,534	-		IAI47_21855	0.26	+1.0
121,534	-		IAI47_21855	0.26	-0.3
121,535	+		IAI47_21855	0.26	+0.9
121,535	+		IAI47_21855	0.26	+0.2
121,535	+		IAI47_21855	0.26	+0.6
121,535	+		IAI47_21855	0.26	+1.5
121,535	+		IAI47_21855	0.26	-0.5
121,536	-		IAI47_21855	0.26	+0.9
121,536	-		IAI47_21855	0.26	-0.2
121,536	-		IAI47_21855	0.26	+1.7
121,536	-		IAI47_21855	0.26	+0.7
121,536	-		IAI47_21855	0.26	-1.0
121,536	-		IAI47_21855	0.26	+3.1
121,536	-		IAI47_21855	0.26	+1.2
121,536	-		IAI47_21855	0.26	+2.3
121,536	-		IAI47_21855	0.26	-0.1
121,731	+		IAI47_21855	0.40	-0.8
121,731	+		IAI47_21855	0.40	+0.2
121,731	+		IAI47_21855	0.40	+1.7
121,731	+		IAI47_21855	0.40	+0.0
121,732	-		IAI47_21855	0.40	+0.7
121,732	-		IAI47_21855	0.40	+1.6
121,732	-		IAI47_21855	0.40	+0.0
121,732	-		IAI47_21855	0.40	+0.4
121,732	-		IAI47_21855	0.40	+0.0
121,732	-		IAI47_21855	0.40	+1.4
121,745	+		IAI47_21855	0.40	+0.4
121,745	+		IAI47_21855	0.40	+1.7
121,790	+		IAI47_21855	0.44	+0.2
121,790	+		IAI47_21855	0.44	-0.3
121,791	-		IAI47_21855	0.44	+1.2
121,791	-		IAI47_21855	0.44	+0.9
121,791	-		IAI47_21855	0.44	+1.4
121,791	-		IAI47_21855	0.44	+0.2
121,792	+		IAI47_21855	0.44	+0.7
121,792	+		IAI47_21855	0.44	+1.2
121,792	+		IAI47_21855	0.44	+1.0
121,792	+		IAI47_21855	0.44	-1.4
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