Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02834

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
2,986,952	+		CCNA_02832	0.86	-0.3
2,986,986	+		CCNA_02832	0.88	+0.9
2,986,986	+		CCNA_02832	0.88	-1.4
2,986,986	+		CCNA_02832	0.88	+0.7
2,986,986	+		CCNA_02832	0.88	+1.6
2,986,994	-		CCNA_02832	0.89	+1.9
2,986,994	-		CCNA_02832	0.89	+0.8
2,986,994	-				+0.9
2,986,998	+		CCNA_02832	0.89	+0.7
2,987,006	-		CCNA_02832	0.90	-3.1
2,987,017	-				+2.6
2,987,026	+				-1.4
2,987,043	+				+0.9
2,987,051	-				+1.7
2,987,076	+				+1.5
2,987,076	+				+1.3
2,987,081	+				+0.1
2,987,081	+				+0.9
2,987,084	-				+0.8
2,987,084	-				-0.9
2,987,084	-				-0.5
2,987,102	+				+1.8
2,987,102	+				+1.9
2,987,102	+				+0.7
2,987,102	+				-0.0
2,987,102	+				+1.3
2,987,102	+				+1.0
2,987,102	+				+2.1
2,987,102	+				+0.6
2,987,102	+				+2.1
2,987,102	+				+1.5
2,987,110	-				-1.0
2,987,110	-				-0.9
2,987,110	-				+2.3
2,987,110	-				+2.9
2,987,110	-				+0.1
2,987,110	-				+0.3
2,987,110	-				+2.3
2,987,110	-				-1.7
2,987,110	-				+1.3
2,987,115	-				+0.3
2,987,119	-				+1.7
2,987,129	-				-1.6
2,987,140	+				+1.8
2,987,140	+				+1.8
2,987,148	-				+0.3
2,987,148	-				-1.1
2,987,150	-				+1.2
2,987,166	+				-0.4
2,987,168	+				-1.5
2,987,198	-				-0.3
2,987,198	-				+0.3
2,987,256	+		CCNA_02833	0.13	-0.1
2,987,256	+		CCNA_02833	0.13	-1.3
2,987,256	+		CCNA_02833	0.13	+0.8
2,987,264	-		CCNA_02833	0.14	+0.6
2,987,264	-		CCNA_02833	0.14	+0.5
2,987,264	-		CCNA_02833	0.14	+0.9
2,987,268	+		CCNA_02833	0.15	+0.4
2,987,309	-		CCNA_02833	0.20	+0.1
2,987,310	+		CCNA_02833	0.20	+0.6
2,987,310	+		CCNA_02833	0.20	-0.7
2,987,313	-		CCNA_02833	0.21	+1.5
2,987,315	+		CCNA_02833	0.21	+0.7
2,987,323	-				+2.3
2,987,324	+		CCNA_02833	0.22	+0.3
2,987,334	+		CCNA_02833	0.23	-2.2
2,987,357	+		CCNA_02833	0.26	+1.7
2,987,360	-		CCNA_02833	0.27	+1.6
2,987,365	-		CCNA_02833	0.27	-0.2
2,987,374	+		CCNA_02833	0.29	+0.3
2,987,392	+		CCNA_02833	0.31	-1.9
2,987,392	+		CCNA_02833	0.31	-0.8
2,987,400	-		CCNA_02833	0.32	+1.3
2,987,400	-		CCNA_02833	0.32	+1.1
2,987,400	-		CCNA_02833	0.32	+1.0
2,987,447	-		CCNA_02833	0.38	-1.3
2,987,447	-		CCNA_02833	0.38	-0.3
2,987,470	+		CCNA_02833	0.41	+1.4
2,987,473	-		CCNA_02833	0.42	+1.6
2,987,473	-		CCNA_02833	0.42	+0.0
2,987,510	+		CCNA_02833	0.46	-1.1
2,987,513	-		CCNA_02833	0.47	+0.0
2,987,532	-		CCNA_02833	0.49	+0.1
2,987,558	-		CCNA_02833	0.53	-0.4
2,987,591	-		CCNA_02833	0.57	+1.2
2,987,614	+		CCNA_02833	0.60	+0.6
2,987,627	-		CCNA_02833	0.62	+0.3
2,987,653	+		CCNA_02833	0.65	-1.4
2,987,696	+		CCNA_02833	0.71	+0.8
2,987,704	-		CCNA_02833	0.72	-0.2
2,987,709	+		CCNA_02833	0.73	-0.5
2,987,738	-		CCNA_02833	0.76	+0.1
2,987,752	+		CCNA_02833	0.78	+0.5
2,987,753	-		CCNA_02833	0.78	+0.9
2,987,780	-		CCNA_02833	0.82	-0.5
2,987,785	-		CCNA_02833	0.83	-1.4
2,987,803	-		CCNA_02833	0.85	-0.5
2,987,827	+		CCNA_02833	0.88	-0.5
2,987,832	+		CCNA_02833	0.89	-0.4
2,987,847	-				+0.7
2,987,858	-				+1.1
2,987,860	+				-0.1
2,987,886	-				+1.3
2,987,891	-				+1.3
2,987,904	-				+1.3
2,987,904	-				+0.6
2,987,904	-				+0.6
2,987,904	-				+1.0
2,987,949	+				-0.2
2,987,949	+				-1.8
2,987,957	-				+0.9
2,987,986	-				+1.1
2,988,006	-				+1.3
2,988,027	-				-0.0
2,988,124	+		CCNA_02834	0.19	-0.8
2,988,178	-		CCNA_02834	0.24	+2.6
2,988,200	-		CCNA_02834	0.27	-1.4
2,988,229	+		CCNA_02834	0.30	-0.4
2,988,247	-		CCNA_02834	0.32	+1.9
2,988,291	-		CCNA_02834	0.36	-1.0
2,988,302	-		CCNA_02834	0.38	+0.2
2,988,311	+		CCNA_02834	0.39	-1.9
2,988,330	+		CCNA_02834	0.41	+1.3
2,988,330	+		CCNA_02834	0.41	+1.5
2,988,332	-		CCNA_02834	0.41	+2.7
2,988,338	-		CCNA_02834	0.41	+0.2
2,988,338	-		CCNA_02834	0.41	-0.1
2,988,344	+		CCNA_02834	0.42	+0.7
2,988,348	-		CCNA_02834	0.42	-1.0
2,988,352	-		CCNA_02834	0.43	+0.5
2,988,353	-				+1.9
2,988,399	+				+0.6
2,988,399	+		CCNA_02834	0.48	+1.3
2,988,407	-		CCNA_02834	0.49	-0.1
2,988,407	-		CCNA_02834	0.49	-1.9
2,988,426	-		CCNA_02834	0.51	+1.9
2,988,469	+		CCNA_02834	0.55	+0.9
2,988,479	+		CCNA_02834	0.56	-0.7
2,988,479	+		CCNA_02834	0.56	-0.3
2,988,479	+		CCNA_02834	0.56	-1.4
2,988,479	+		CCNA_02834	0.56	-1.7
2,988,481	+		CCNA_02834	0.57	-1.9
2,988,481	+		CCNA_02834	0.57	-2.4
2,988,482	-		CCNA_02834	0.57	-0.1
2,988,487	-		CCNA_02834	0.57	-0.4
2,988,487	-		CCNA_02834	0.57	-1.5
2,988,487	-		CCNA_02834	0.57	-1.5
2,988,487	-		CCNA_02834	0.57	-0.4
2,988,511	+		CCNA_02834	0.60	+0.4
2,988,524	-		CCNA_02834	0.61	+1.2
2,988,561	+		CCNA_02834	0.65	-0.4
2,988,588	+		CCNA_02834	0.68	-1.5
2,988,588	+		CCNA_02834	0.68	-0.7
2,988,588	+		CCNA_02834	0.68	-0.7
2,988,588	+		CCNA_02834	0.68	-2.3
2,988,588	+		CCNA_02834	0.68	+0.2
2,988,596	-		CCNA_02834	0.69	-1.3
2,988,596	-		CCNA_02834	0.69	+0.4
2,988,596	-		CCNA_02834	0.69	-0.5
2,988,596	-		CCNA_02834	0.69	+0.6
2,988,596	-		CCNA_02834	0.69	+0.1
2,988,596	-		CCNA_02834	0.69	-0.9
2,988,596	-		CCNA_02834	0.69	-0.4
2,988,608	-		CCNA_02834	0.70	-0.0
2,988,627	+		CCNA_02834	0.72	+0.7
2,988,645	-		CCNA_02834	0.74	-0.5
2,988,670	-		CCNA_02834	0.77	-1.5
2,988,674	+		CCNA_02834	0.77	+1.4
2,988,694	+		CCNA_02834	0.79	-0.9
2,988,718	+		CCNA_02834	0.82	+1.7
2,988,718	+		CCNA_02834	0.82	-0.9
2,988,725	+		CCNA_02834	0.82	+0.9
2,988,726	-		CCNA_02834	0.83	+0.5
2,988,738	-		CCNA_02834	0.84	-0.1
2,988,744	-		CCNA_02834	0.85	-2.1
2,988,765	-		CCNA_02834	0.87	-0.4
2,988,821	-				+2.0
2,988,844	+				+0.4
2,988,844	+				-0.1
2,988,844	+				-0.1
2,988,844	+				-0.4
2,988,844	+				-1.3
2,988,844	+				-1.7
2,988,852	-				-0.6
2,988,852	-				-0.2
2,988,852	-				-0.6
2,988,852	-				-0.2
2,988,852	-				-1.3
2,988,852	-				+0.0
2,988,852	-				+1.9
2,988,852	-				+1.8
2,988,860	+				-0.2
2,988,872	-				-0.2
2,988,873	-				-0.4
2,988,922	-				+1.3
2,988,969	-				+0.6
2,988,977	-				+1.2
2,989,015	-		CCNA_02835	0.12	-2.4
2,989,060	-		CCNA_02835	0.19	-1.4
2,989,185	-		CCNA_02835	0.39	-2.3
2,989,216	-		CCNA_02835	0.44	-1.3
2,989,216	-		CCNA_02835	0.44	-2.9
2,989,216	-		CCNA_02835	0.44	-2.6
2,989,223	-		CCNA_02835	0.45	-2.0
2,989,228	-		CCNA_02835	0.46	-1.3
2,989,434	-		CCNA_02835	0.79	-1.3
2,989,505	-				-1.2
2,989,579	-				+1.5
2,989,579	-				+0.7
2,989,581	+				-0.7
2,989,589	-				+1.7
2,989,589	-				+0.6
2,989,734	-		CCNA_02836	0.38	-2.7
2,989,759	-		CCNA_02836	0.43	-1.6
2,989,782	+		CCNA_02836	0.48	-0.7
2,989,830	-		CCNA_02836	0.59	-1.1
2,989,831	-		CCNA_02836	0.59	-2.8
2,989,831	-		CCNA_02836	0.59	-1.2
2,989,878	-		CCNA_02836	0.69	-2.1
2,989,888	-		CCNA_02836	0.72	-1.9