Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS24755

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
6,043,961	+				+0.9
6,043,996	+				+0.3
6,043,996	+				-0.9
6,044,001	+				+0.3
6,044,002	-				-0.3
6,044,049	+				-0.4
6,044,049	+				+0.5
6,044,137	-				+0.4
6,044,155	-				-2.3
6,044,159	-				-0.2
6,044,239	+		CA265_RS24750	0.13	-1.2
6,044,357	-		CA265_RS24750	0.31	-1.4
6,044,370	+		CA265_RS24750	0.33	-0.8
6,044,501	-		CA265_RS24750	0.52	-0.6
6,044,548	-		CA265_RS24750	0.59	-1.4
6,044,708	+		CA265_RS24750	0.83	-0.8
6,044,867	+				-2.2
6,044,868	-				-1.4
6,044,887	+				-2.5
6,044,907	-				+0.5
6,044,949	-				+0.5
6,044,957	-				-0.2
6,044,961	-				+0.4
6,044,966	-				-0.9
6,045,129	+		CA265_RS24755	0.46	-0.4
6,045,129	+		CA265_RS24755	0.46	-0.6
6,045,130	-		CA265_RS24755	0.46	-0.2
6,045,130	-		CA265_RS24755	0.46	+0.4
6,045,130	-		CA265_RS24755	0.46	+1.5
6,045,130	-		CA265_RS24755	0.46	+0.3
6,045,140	+		CA265_RS24755	0.49	-0.2
6,045,141	-		CA265_RS24755	0.49	+0.1
6,045,292	+		CA265_RS24755	0.86	+0.1
6,045,306	+		CA265_RS24755	0.89	+0.5
6,045,307	-		CA265_RS24755	0.89	+0.6
6,045,365	-				-0.1
6,045,373	-				+0.4
6,045,420	-				+0.2
6,045,451	-				-0.1
6,045,451	-				+0.4
6,045,451	-				+0.5
6,045,454	+				+0.1
6,045,494	+				+0.2
6,045,495	-				-0.7
6,045,495	-				+0.4
6,045,497	-				-0.8
6,045,548	-				+0.3
6,045,559	+				+1.2
6,045,568	+		CA265_RS24760	0.10	-0.4
6,045,587	+		CA265_RS24760	0.12	-0.1
6,045,588	-		CA265_RS24760	0.12	-0.1
6,045,602	-		CA265_RS24760	0.13	+0.9
6,045,602	-		CA265_RS24760	0.13	+0.1
6,045,758	+		CA265_RS24760	0.27	+0.2
6,045,820	-		CA265_RS24760	0.33	+0.2
6,045,829	+		CA265_RS24760	0.34	+0.7
6,045,866	-		CA265_RS24760	0.37	+0.6
6,045,915	-		CA265_RS24760	0.42	+0.6
6,045,915	-		CA265_RS24760	0.42	+0.3
6,046,032	+		CA265_RS24760	0.52	+0.8
6,046,086	-		CA265_RS24760	0.57	+0.4
6,046,089	-		CA265_RS24760	0.57	-0.1
6,046,094	+		CA265_RS24760	0.58	+0.4
6,046,095	-		CA265_RS24760	0.58	-0.5
6,046,130	+		CA265_RS24760	0.61	-0.1
6,046,153	+		CA265_RS24760	0.63	+0.0
6,046,198	-		CA265_RS24760	0.67	+0.8
6,046,326	-		CA265_RS24760	0.79	-0.1
6,046,326	-		CA265_RS24760	0.79	-0.1
6,046,332	-		CA265_RS24760	0.79	+0.5
6,046,332	-		CA265_RS24760	0.79	-0.7