Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS21555

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
5,307,738	+		CA265_RS21550	0.69	-0.4
5,307,743	-		CA265_RS21550	0.69	+0.9
5,307,774	+		CA265_RS21550	0.71	-2.1
5,307,832	+		CA265_RS21550	0.73	-1.2
5,307,856	-		CA265_RS21550	0.74	-0.6
5,307,862	+		CA265_RS21550	0.74	+0.1
5,307,863	-		CA265_RS21550	0.74	-0.2
5,307,910	-		CA265_RS21550	0.76	-0.6
5,307,938	-		CA265_RS21550	0.77	+0.4
5,307,938	-		CA265_RS21550	0.77	+0.6
5,307,943	+		CA265_RS21550	0.77	-1.1
5,307,943	+		CA265_RS21550	0.77	+1.9
5,307,944	-		CA265_RS21550	0.77	-1.0
5,307,999	+		CA265_RS21550	0.80	-0.2
5,308,055	+		CA265_RS21550	0.82	+0.5
5,308,056	-		CA265_RS21550	0.82	+0.4
5,308,071	+		CA265_RS21550	0.82	-2.0
5,308,072	-		CA265_RS21550	0.82	-0.1
5,308,090	-		CA265_RS21550	0.83	-0.3
5,308,103	+		CA265_RS21550	0.84	+0.5
5,308,104	-		CA265_RS21550	0.84	-0.1
5,308,106	+		CA265_RS21550	0.84	+0.4
5,308,134	-		CA265_RS21550	0.85	-1.2
5,308,137	+		CA265_RS21550	0.85	-0.6
5,308,196	+		CA265_RS21550	0.87	+0.2
5,308,258	+		CA265_RS21550	0.90	-0.3
5,308,259	-		CA265_RS21550	0.90	+0.2
5,308,344	-				+0.1
5,308,364	+				-1.4
5,308,450	-				+0.1
5,308,463	-				+1.6
5,308,472	+				-0.1
5,308,477	-				+0.4
5,308,496	+				-0.3
5,308,558	+				+0.3
5,308,579	+				-1.4
5,308,579	+				+0.2
5,308,662	+				+1.2
5,308,772	+				-1.6
5,308,773	-				+0.3
5,308,930	-		CA265_RS21555	0.23	+1.1
5,308,946	+		CA265_RS21555	0.25	+1.5
5,309,097	+		CA265_RS21555	0.42	+2.2
5,309,216	+		CA265_RS21555	0.56	+0.4
5,309,259	-		CA265_RS21555	0.61	-0.2
5,309,280	-		CA265_RS21555	0.63	+0.6
5,309,330	+		CA265_RS21555	0.69	+0.9
5,309,470	-		CA265_RS21555	0.85	-0.7
5,309,516	-				+0.1
5,309,561	+				-0.0
5,309,566	-				-0.6
5,309,612	-				+0.0
5,309,627	-				-0.8
5,309,682	+				-0.1
5,309,683	-				-0.1
5,309,781	-		CA265_RS21560	0.12	-1.4
5,309,893	-		CA265_RS21560	0.24	+0.2
5,309,893	-		CA265_RS21560	0.24	+0.1
5,309,893	-		CA265_RS21560	0.24	-0.2
5,309,940	+		CA265_RS21560	0.29	-0.9
5,309,941	-		CA265_RS21560	0.29	-0.8
5,310,066	-		CA265_RS21560	0.43	-0.1
5,310,078	-		CA265_RS21560	0.44	-0.1
5,310,104	-		CA265_RS21560	0.47	+0.3
5,310,186	+		CA265_RS21560	0.56	-1.1
5,310,186	+		CA265_RS21560	0.56	-1.1
5,310,189	+		CA265_RS21560	0.56	+0.2
5,310,190	-		CA265_RS21560	0.56	+0.3
5,310,243	+		CA265_RS21560	0.62	+0.4
5,310,363	+		CA265_RS21560	0.75	+0.6
5,310,364	-		CA265_RS21560	0.75	-0.2
5,310,376	+		CA265_RS21560	0.76	+0.2
5,310,413	+		CA265_RS21560	0.80	+0.8
5,310,413	+		CA265_RS21560	0.80	-2.0
5,310,413	+		CA265_RS21560	0.80	-0.1
5,310,414	-		CA265_RS21560	0.80	+1.4
5,310,414	-		CA265_RS21560	0.80	+0.9
5,310,420	-		CA265_RS21560	0.81	-1.0
5,310,430	+		CA265_RS21560	0.82	+0.3
5,310,450	+		CA265_RS21560	0.84	-1.2
5,310,599	-				+0.9