Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS19380

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
4,809,542	+				+0.2
4,809,542	+				+0.1
4,809,585	-				+0.7
4,809,606	-				-0.2
4,809,633	-				-0.9
4,809,831	+		CA265_RS19380	0.16	+0.3
4,809,839	-		CA265_RS19380	0.17	+0.4
4,809,938	+		CA265_RS19380	0.27	+0.8
4,809,979	+		CA265_RS19380	0.31	+0.6
4,809,981	+		CA265_RS19380	0.31	+0.2
4,809,981	+		CA265_RS19380	0.31	+0.3
4,809,982	-		CA265_RS19380	0.31	+1.5
4,810,016	+		CA265_RS19380	0.35	+0.9
4,810,066	-		CA265_RS19380	0.40	+1.3
4,810,096	+		CA265_RS19380	0.43	+0.6
4,810,168	+		CA265_RS19380	0.50	+0.4
4,810,194	+		CA265_RS19380	0.53	+2.1
4,810,280	-		CA265_RS19380	0.62	-0.1
4,810,283	+		CA265_RS19380	0.62	+0.0
4,810,284	-		CA265_RS19380	0.62	-0.4
4,810,406	-		CA265_RS19380	0.75	+0.9
4,810,406	-		CA265_RS19380	0.75	-1.0
4,810,411	+		CA265_RS19380	0.75	-0.1
4,810,415	-		CA265_RS19380	0.76	-0.5
4,810,477	+		CA265_RS19380	0.82	+0.5
4,810,480	-		CA265_RS19380	0.82	-0.7
4,810,505	+		CA265_RS19380	0.85	+0.6
4,810,506	-		CA265_RS19380	0.85	+0.1
4,810,599	+				+1.2
4,810,600	-				-0.4
4,810,600	-				+1.4
4,810,770	-				+0.0
4,810,770	-				-1.8
4,810,770	-				+0.5
4,810,789	+				+0.3
4,810,789	+				-0.1
4,810,790	-				+0.5
4,810,790	-				+1.1
4,810,891	+				-1.3
4,810,903	-				-0.1
4,810,910	-				+0.6
4,810,910	-				+0.5
4,810,918	-				-0.5
4,810,946	-				+1.3
4,810,950	+				-0.1
4,810,955	-				+0.2
4,810,977	+				+0.2
4,810,978	-				-0.8
4,810,978	-				-0.4
4,810,982	-				+0.2
4,810,982	-				-0.3
4,810,982	-				-0.7
4,811,056	+				+0.1
4,811,056	+				+0.4
4,811,067	-				-0.5
4,811,108	+				+0.0
4,811,130	-				+0.3
4,811,130	-				+1.7
4,811,167	-				+0.0
4,811,167	-				+0.5
4,811,167	-				+0.3
4,811,268	+				-1.5
4,811,269	-				-1.8
4,811,281	+				-0.6
4,811,281	+				-1.0
4,811,390	+		CA265_RS19385	0.14	-1.1
4,811,391	-		CA265_RS19385	0.14	-1.4
4,811,391	-		CA265_RS19385	0.14	-0.7
4,811,419	-		CA265_RS19385	0.17	-1.4
4,811,481	+		CA265_RS19385	0.23	-1.7
4,811,549	-		CA265_RS19385	0.30	-1.2
4,811,609	-		CA265_RS19385	0.36	+0.6
4,811,646	-		CA265_RS19385	0.39	-1.6