Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS18495

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
4,599,976	+		CA265_RS18485	0.53	+0.1
4,600,227	+		CA265_RS18485	0.72	+0.3
4,600,228	-		CA265_RS18485	0.72	+0.1
4,600,346	-		CA265_RS18485	0.80	-0.8
4,600,409	+		CA265_RS18485	0.85	-0.4
4,600,409	+		CA265_RS18485	0.85	+0.8
4,600,504	+				-0.1
4,600,505	-				+0.8
4,600,577	-				+0.6
4,600,618	-				-0.2
4,600,688	-		CA265_RS18490	0.16	-0.4
4,600,693	+		CA265_RS18490	0.17	-2.2
4,600,702	+		CA265_RS18490	0.20	-0.5
4,600,723	+		CA265_RS18490	0.26	-1.0
4,600,734	+		CA265_RS18490	0.29	-0.1
4,600,785	+		CA265_RS18490	0.45	-0.2
4,600,824	-		CA265_RS18490	0.56	-1.8
4,600,928	-		CA265_RS18490	0.88	-0.1
4,600,929	+		CA265_RS18490	0.88	+1.0
4,600,929	+		CA265_RS18490	0.88	+1.0
4,600,930	-		CA265_RS18490	0.88	+0.3
4,600,945	-				-0.0
4,600,980	-				+0.4
4,600,982	+				+0.7
4,601,036	+		CA265_RS18495	0.31	+0.1
4,601,060	+		CA265_RS18495	0.41	+2.2
4,601,206	-				+0.2
4,601,211	-				-1.6
4,601,284	+				+0.5
4,601,293	-				+0.6
4,601,366	-		CA265_RS18500	0.13	-0.8
4,601,399	+		CA265_RS18500	0.16	+0.5
4,601,487	+		CA265_RS18500	0.24	+0.4
4,601,525	-		CA265_RS18500	0.28	-0.6
4,601,558	-		CA265_RS18500	0.31	-0.2
4,601,558	-		CA265_RS18500	0.31	+0.5
4,601,619	+		CA265_RS18500	0.36	+0.1
4,601,706	+		CA265_RS18500	0.45	-0.0
4,601,706	+		CA265_RS18500	0.45	+0.4
4,601,708	+		CA265_RS18500	0.45	+0.8
4,601,708	+		CA265_RS18500	0.45	-1.4
4,601,801	-		CA265_RS18500	0.53	+0.8
4,601,948	+		CA265_RS18500	0.67	+1.8
4,601,977	+		CA265_RS18500	0.70	+0.1
4,601,978	-		CA265_RS18500	0.70	-1.0
4,601,998	-		CA265_RS18500	0.72	-1.0
4,601,998	-		CA265_RS18500	0.72	-1.8
4,602,041	+		CA265_RS18500	0.76	+1.6
4,602,072	+		CA265_RS18500	0.79	-1.2
4,602,134	+		CA265_RS18500	0.85	-1.0
4,602,134	+		CA265_RS18500	0.85	+0.9