Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS15350

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
3,863,232	+		CA265_RS15345	0.46	+0.3
3,863,244	-		CA265_RS15345	0.47	+0.3
3,863,253	+		CA265_RS15345	0.48	+0.7
3,863,262	+		CA265_RS15345	0.48	-0.3
3,863,359	-		CA265_RS15345	0.54	+0.0
3,863,363	+		CA265_RS15345	0.54	+1.0
3,863,451	-		CA265_RS15345	0.59	+0.5
3,863,505	+		CA265_RS15345	0.62	-0.5
3,863,515	+		CA265_RS15345	0.63	-0.4
3,863,552	-		CA265_RS15345	0.65	-0.4
3,863,582	-		CA265_RS15345	0.67	-0.2
3,863,735	-		CA265_RS15345	0.76	+0.8
3,863,750	+		CA265_RS15345	0.77	-0.0
3,863,750	+		CA265_RS15345	0.77	-0.1
3,863,752	+		CA265_RS15345	0.77	+0.0
3,863,753	-		CA265_RS15345	0.77	-1.4
3,863,776	-		CA265_RS15345	0.78	-0.6
3,864,011	+				+1.3
3,864,042	+				-0.9
3,864,043	-				+0.4
3,864,142	+				+2.2
3,864,174	-				+0.3
3,864,190	-				-0.1
3,864,258	-				+0.5
3,864,409	+		CA265_RS15350	0.16	-0.3
3,864,540	+		CA265_RS15350	0.27	-0.9
3,864,601	-		CA265_RS15350	0.32	+0.6
3,864,601	-		CA265_RS15350	0.32	+0.1
3,864,601	-		CA265_RS15350	0.32	+0.1
3,864,605	+		CA265_RS15350	0.32	+0.3
3,864,621	-		CA265_RS15350	0.34	+0.9
3,864,627	-		CA265_RS15350	0.34	-1.0
3,864,743	+		CA265_RS15350	0.44	+0.9
3,864,744	-		CA265_RS15350	0.44	+0.4
3,864,747	+		CA265_RS15350	0.45	-2.4
3,864,801	+		CA265_RS15350	0.49	+1.2
3,864,865	-		CA265_RS15350	0.55	+1.0
3,864,903	-		CA265_RS15350	0.58	+1.1
3,864,906	+		CA265_RS15350	0.58	+1.0
3,864,907	-		CA265_RS15350	0.59	-0.2
3,864,947	+		CA265_RS15350	0.62	-0.2
3,865,086	-		CA265_RS15350	0.74	+0.5
3,865,139	-		CA265_RS15350	0.79	+0.1
3,865,139	-		CA265_RS15350	0.79	+0.1
3,865,216	-		CA265_RS15350	0.85	+0.3
3,865,241	+		CA265_RS15350	0.87	-0.0
3,865,270	-		CA265_RS15350	0.90	+0.1
3,865,312	-				+0.5
3,865,317	+				+0.4
3,865,370	+				+0.4
3,865,407	-				-0.6
3,865,440	-				-0.4
3,865,527	-		CA265_RS15355	0.12	-0.7
3,865,641	-		CA265_RS15355	0.23	-0.9
3,865,641	-		CA265_RS15355	0.23	+1.9
3,865,759	+		CA265_RS15355	0.34	+0.1
3,865,791	-		CA265_RS15355	0.38	-0.2
3,865,809	+		CA265_RS15355	0.39	+1.3
3,865,810	-		CA265_RS15355	0.39	+0.5
3,865,821	-		CA265_RS15355	0.40	-0.4
3,865,831	+		CA265_RS15355	0.41	-1.9
3,865,913	+		CA265_RS15355	0.49	-1.0
3,865,941	+		CA265_RS15355	0.52	-0.6
3,865,955	+		CA265_RS15355	0.53	-0.4
3,865,955	+				+1.0
3,866,016	+		CA265_RS15355	0.59	-0.6
3,866,016	+		CA265_RS15355	0.59	-0.4
3,866,016	+		CA265_RS15355	0.59	-0.7
3,866,037	-		CA265_RS15355	0.61	+0.4
3,866,037	-		CA265_RS15355	0.61	+0.7
3,866,077	+		CA265_RS15355	0.65	+0.0
3,866,111	+		CA265_RS15355	0.68	-0.2
3,866,148	+		CA265_RS15355	0.71	+0.6
3,866,148	+		CA265_RS15355	0.71	+0.0
3,866,308	-		CA265_RS15355	0.87	-0.1
3,866,308	-		CA265_RS15355	0.87	+0.1