Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS12655

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
3,156,829	-		CA265_RS12650	0.65	-0.4
3,156,842	+		CA265_RS12650	0.66	+0.7
3,156,847	-		CA265_RS12650	0.67	+0.3
3,156,905	+		CA265_RS12650	0.73	-0.3
3,157,043	+		CA265_RS12650	0.89	+0.3
3,157,083	+				-0.2
3,157,083	+				+0.7
3,157,129	-				+0.8
3,157,129	-				+0.2
3,157,210	-				-0.3
3,157,211	+				+0.1
3,157,227	-				-0.3
3,157,227	-				+0.4
3,157,302	-				-1.4
3,157,376	-				+2.0
3,157,379	-				+0.4
3,157,450	+				-0.6
3,157,450	+				-1.7
3,157,530	-				-0.0
3,157,597	-				+1.1
3,157,604	-				+1.0
3,157,701	+				-0.4
3,157,767	+				+1.0
3,157,834	-				+0.2
3,157,875	+		CA265_RS12655	0.15	-0.3
3,157,880	+		CA265_RS12655	0.16	-0.3
3,157,942	+		CA265_RS12655	0.34	-1.0
3,157,972	-		CA265_RS12655	0.43	-1.3
3,158,062	-		CA265_RS12655	0.69	-0.9
3,158,065	+		CA265_RS12655	0.70	-0.5
3,158,065	+		CA265_RS12655	0.70	-0.4
3,158,066	-		CA265_RS12655	0.70	-0.3
3,158,069	+		CA265_RS12655	0.71	-0.7
3,158,107	-		CA265_RS12655	0.82	-1.5
3,158,116	-		CA265_RS12655	0.85	-0.7
3,158,116	-		CA265_RS12655	0.85	+0.3
3,158,121	+		CA265_RS12655	0.87	-0.5
3,158,121	+				-0.9
3,158,122	-		CA265_RS12655	0.87	+0.2
3,158,136	-				-0.1
3,158,207	-				-0.6
3,158,229	+				+0.1
3,158,288	+		CA265_RS12660	0.18	-0.1
3,158,289	-		CA265_RS12660	0.18	-1.1
3,158,392	+		CA265_RS12660	0.33	-0.4
3,158,422	+		CA265_RS12660	0.38	-0.5
3,158,435	+		CA265_RS12660	0.40	+0.3
3,158,478	+		CA265_RS12660	0.46	+1.4
3,158,478	+		CA265_RS12660	0.46	+0.2
3,158,478	+		CA265_RS12660	0.46	-0.2
3,158,479	-		CA265_RS12660	0.46	-0.6
3,158,518	+		CA265_RS12660	0.52	+0.4
3,158,520	+		CA265_RS12660	0.52	-0.5
3,158,568	+		CA265_RS12660	0.60	+0.1
3,158,601	-		CA265_RS12660	0.64	+0.4
3,158,609	+		CA265_RS12660	0.66	+0.3
3,158,619	+		CA265_RS12660	0.67	-0.0
3,158,695	+		CA265_RS12660	0.78	-0.4
3,158,695	+		CA265_RS12660	0.78	-0.1
3,158,701	+		CA265_RS12660	0.79	-0.3
3,158,714	+		CA265_RS12660	0.81	-0.2
3,158,715	-		CA265_RS12660	0.81	-0.5
3,158,770	+		CA265_RS12660	0.90	+0.3
3,158,771	-		CA265_RS12660	0.90	-1.2
3,158,843	+				-0.7
3,158,872	+				+0.4
3,158,873	-				+0.0
3,158,881	+				-0.9
3,158,947	+				-0.2
3,159,001	+				-0.4
3,159,019	+				+0.1
3,159,023	+				-0.4
3,159,054	-				-0.3
3,159,087	-				-0.5
3,159,140	+		CA265_RS12665	0.29	+0.2