Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10860

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
2,677,649	+				-1.0
2,677,651	+				-0.5
2,677,652	-				-0.8
2,677,872	+				-1.4
2,677,873	-				+0.6
2,677,921	+				-0.1
2,677,952	+				+1.8
2,677,989	+		CA265_RS10860	0.17	-1.1
2,677,998	-		CA265_RS10860	0.21	-0.4
2,678,083	+		CA265_RS10860	0.61	-0.2
2,678,084	-		CA265_RS10860	0.62	+0.5
2,678,084	-		CA265_RS10860	0.62	-0.4
2,678,103	-		CA265_RS10860	0.70	-1.2
2,678,135	-		CA265_RS10860	0.85	-1.2
2,678,149	-				-1.5
2,678,159	+				-0.8
2,678,159	+				-0.7
2,678,160	-				-1.2
2,678,164	-				-1.0
2,678,192	+				+0.0
2,678,270	+				-0.7
2,678,270	+				-0.2
2,678,378	+		CA265_RS10865	0.20	+0.0
2,678,382	-		CA265_RS10865	0.20	+1.0
2,678,404	-		CA265_RS10865	0.24	-0.6
2,678,514	-		CA265_RS10865	0.44	-0.6
2,678,517	+		CA265_RS10865	0.45	-1.2
2,678,518	-		CA265_RS10865	0.45	+0.0
2,678,555	-		CA265_RS10865	0.52	-0.4
2,678,555	-		CA265_RS10865	0.52	+0.8
2,678,593	-		CA265_RS10865	0.58	+0.3
2,678,614	-		CA265_RS10865	0.62	-1.0
2,678,686	-		CA265_RS10865	0.75	+0.4
2,678,725	+		CA265_RS10865	0.82	-0.8
2,678,793	+				+0.2
2,678,948	-				-0.8
2,678,948	-				+0.2
2,678,948	-				-0.3
2,678,958	+				-0.5
2,678,969	-				+1.4
2,678,997	-				+0.0
2,679,143	-				-1.0