Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09650

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
2,381,464	+		CA265_RS09635	0.71	+0.5
2,381,469	+		CA265_RS09635	0.72	-0.1
2,381,550	-				-0.6
2,381,555	+				+0.5
2,381,600	+				+0.1
2,381,605	-				+0.8
2,381,610	+				+0.2
2,381,710	+				-0.3
2,381,749	-		CA265_RS09640	0.16	+0.3
2,381,919	+		CA265_RS09640	0.61	-0.7
2,381,963	+		CA265_RS09640	0.72	+0.4
2,382,142	-				+0.4
2,382,152	+				-0.6
2,382,159	-				-0.3
2,382,194	+		CA265_RS09645	0.10	-0.1
2,382,195	-		CA265_RS09645	0.11	-0.6
2,382,195	-		CA265_RS09645	0.11	+0.8
2,382,198	-		CA265_RS09645	0.12	+0.1
2,382,238	-		CA265_RS09645	0.31	-0.5
2,382,284	+		CA265_RS09645	0.53	+0.9
2,382,284	+		CA265_RS09645	0.53	-0.9
2,382,285	-		CA265_RS09645	0.53	-0.2
2,382,322	+		CA265_RS09645	0.70	+0.4
2,382,457	+				+0.1
2,382,457	+				+0.3
2,382,582	+		CA265_RS09650	0.11	-0.3
2,382,802	-		CA265_RS09650	0.29	-0.2
2,382,986	+		CA265_RS09650	0.45	+0.3
2,383,110	+		CA265_RS09650	0.56	+0.6
2,383,294	-		CA265_RS09650	0.71	-1.7
2,383,298	+		CA265_RS09650	0.72	+1.5
2,383,495	+		CA265_RS09650	0.89	+1.6
2,383,570	+				-1.1
2,383,675	+				-0.1
2,383,727	-				-0.5
2,383,802	-				+0.2
2,383,813	+				+0.9
2,383,814	-				-0.6
2,383,845	+				-0.0
2,383,846	-				-0.0
2,383,846	-				-1.9
2,383,880	-				-0.4
2,383,948	+				-0.2
2,383,961	+				-0.9
2,383,992	-				+0.3
2,384,024	-				+0.2
2,384,024	-				-0.6
2,384,135	+		CA265_RS09655	0.14	+1.2
2,384,136	-		CA265_RS09655	0.14	-0.1
2,384,136	-		CA265_RS09655	0.14	+1.5
2,384,148	-		CA265_RS09655	0.15	-0.7
2,384,157	+		CA265_RS09655	0.16	+0.1
2,384,196	+		CA265_RS09655	0.19	+0.6
2,384,247	-		CA265_RS09655	0.23	-0.1
2,384,252	+				+0.3
2,384,269	+		CA265_RS09655	0.25	+0.3
2,384,298	+		CA265_RS09655	0.27	+0.0
2,384,298	+		CA265_RS09655	0.27	-0.0
2,384,299	-		CA265_RS09655	0.27	-0.0
2,384,299	-		CA265_RS09655	0.27	+0.1
2,384,321	+		CA265_RS09655	0.28	-0.5
2,384,321	+		CA265_RS09655	0.28	+0.3
2,384,322	-		CA265_RS09655	0.29	-0.3
2,384,375	+		CA265_RS09655	0.33	+0.5
2,384,512	+		CA265_RS09655	0.43	+1.0