Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09585

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
2,369,977	+		CA265_RS09580	0.37	+0.3
2,369,977	+		CA265_RS09580	0.37	-0.4
2,370,013	+		CA265_RS09580	0.40	+0.1
2,370,053	+		CA265_RS09580	0.43	-0.0
2,370,053	+		CA265_RS09580	0.43	+0.2
2,370,056	+		CA265_RS09580	0.43	+0.7
2,370,080	+		CA265_RS09580	0.45	+0.4
2,370,080	+		CA265_RS09580	0.45	+0.6
2,370,113	+		CA265_RS09580	0.48	+0.4
2,370,113	+		CA265_RS09580	0.48	-0.5
2,370,125	+		CA265_RS09580	0.49	+0.0
2,370,201	+		CA265_RS09580	0.54	+1.3
2,370,343	+		CA265_RS09580	0.65	-0.4
2,370,384	-		CA265_RS09580	0.68	+0.0
2,370,388	+		CA265_RS09580	0.68	+0.2
2,370,389	-		CA265_RS09580	0.68	+0.7
2,370,449	-		CA265_RS09580	0.73	-0.3
2,370,497	-		CA265_RS09580	0.77	-0.8
2,370,537	+		CA265_RS09580	0.80	-0.2
2,370,537	+		CA265_RS09580	0.80	-0.1
2,370,537	+		CA265_RS09580	0.80	+1.5
2,370,538	-		CA265_RS09580	0.80	+0.2
2,370,589	+		CA265_RS09580	0.84	+0.5
2,370,612	-		CA265_RS09580	0.85	-0.2
2,370,637	+		CA265_RS09580	0.87	-1.3
2,370,643	+		CA265_RS09580	0.88	-0.6
2,370,644	-		CA265_RS09580	0.88	+0.1
2,370,667	+		CA265_RS09580	0.89	-0.0
2,370,862	-				-0.1
2,370,863	+				+0.5
2,370,865	+				+0.7
2,370,997	+				+0.3
2,371,009	-				-0.5
2,371,009	-				-0.4
2,371,014	+				+0.1
2,371,149	-		CA265_RS09585	0.15	-0.6
2,371,249	+		CA265_RS09585	0.23	-0.1
2,371,401	+		CA265_RS09585	0.34	-2.4
2,371,454	-		CA265_RS09585	0.39	+0.0
2,371,498	+		CA265_RS09585	0.42	-1.6
2,371,499	-		CA265_RS09585	0.42	-0.3
2,371,499	-		CA265_RS09585	0.42	-1.4
2,371,553	+		CA265_RS09585	0.46	-1.7
2,371,711	+		CA265_RS09585	0.58	-1.9
2,371,732	+		CA265_RS09585	0.60	-0.5
2,371,770	-		CA265_RS09585	0.63	-0.0
2,371,802	+		CA265_RS09585	0.65	-1.3
2,371,882	+		CA265_RS09585	0.72	-3.0
2,372,126	+				-0.4
2,372,239	+				-0.4
2,372,244	-				-2.7
2,372,244	-				-0.7
2,372,281	+				-0.4
2,372,288	-				-0.8
2,372,410	+				+0.1
2,372,573	+				+0.7
2,372,573	+				+0.3
2,372,627	-				+0.5
2,372,628	+				-0.1
2,372,628	+				+0.1
2,372,628	+				-0.1
2,372,628	+				-1.1
2,372,628	+				-1.2
2,372,628	+				-0.3
2,372,629	-				+0.8
2,372,629	-				+0.2
2,372,706	+				-0.7
2,372,706	+				-0.9
2,372,847	-				-0.0
2,372,853	+				-0.4
2,372,900	+				-0.7
2,372,901	-				-1.1
2,372,902	+				-0.6
2,372,902	+				-0.2
2,372,987	-				-1.1
2,372,993	+				-1.3
2,373,011	-				-0.1
2,373,041	-				+0.2
2,373,085	-				+0.4
2,373,092	+				-0.3
2,373,092	+				+0.5
2,373,093	-				-0.3
2,373,093	-				-0.8
2,373,107	-				-0.5
2,373,249	-				-0.2