Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06140

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
1,514,915	+		CA265_RS06135	0.44	+0.3
1,514,931	-		CA265_RS06135	0.46	-0.0
1,514,934	+		CA265_RS06135	0.46	+0.1
1,514,938	+		CA265_RS06135	0.46	-1.1
1,514,960	-		CA265_RS06135	0.48	-0.5
1,514,960	-		CA265_RS06135	0.48	-0.1
1,514,960	-		CA265_RS06135	0.48	+0.4
1,514,966	-		CA265_RS06135	0.48	+0.5
1,515,039	-		CA265_RS06135	0.54	-0.7
1,515,134	+		CA265_RS06135	0.62	+0.9
1,515,135	-		CA265_RS06135	0.62	+1.4
1,515,155	-		CA265_RS06135	0.64	-0.5
1,515,214	+		CA265_RS06135	0.68	+0.2
1,515,217	+		CA265_RS06135	0.69	-0.8
1,515,217	+		CA265_RS06135	0.69	-0.3
1,515,272	+		CA265_RS06135	0.73	-0.4
1,515,301	-		CA265_RS06135	0.75	-0.7
1,515,301	-		CA265_RS06135	0.75	+0.1
1,515,347	-		CA265_RS06135	0.79	+0.1
1,515,363	-		CA265_RS06135	0.80	-0.2
1,515,391	+		CA265_RS06135	0.82	+1.0
1,515,392	-		CA265_RS06135	0.82	-0.0
1,515,392	-		CA265_RS06135	0.82	+0.6
1,515,403	+		CA265_RS06135	0.83	+0.5
1,515,403	+		CA265_RS06135	0.83	+0.3
1,515,437	+		CA265_RS06135	0.86	+0.0
1,515,438	-		CA265_RS06135	0.86	+0.0
1,515,460	+		CA265_RS06135	0.88	-0.8
1,515,461	-		CA265_RS06135	0.88	-0.5
1,515,476	+		CA265_RS06135	0.89	-0.3
1,515,485	+		CA265_RS06135	0.90	+0.6
1,515,510	-				+0.1
1,515,519	-				-0.1
1,515,590	+				+0.2
1,515,600	+				-0.6
1,515,660	-				-0.7
1,515,667	+				+0.0
1,515,668	-				-0.2
1,515,868	+				-0.8
1,515,884	+				+0.1
1,515,895	+				-0.5
1,515,924	-				+0.1
1,515,990	-		CA265_RS06140	0.28	-0.7
1,516,029	+		CA265_RS06140	0.40	-0.2
1,516,030	-		CA265_RS06140	0.40	-0.2
1,516,058	-		CA265_RS06140	0.48	-0.4
1,516,082	+		CA265_RS06140	0.55	+1.1
1,516,082	+		CA265_RS06140	0.55	-1.9
1,516,083	-		CA265_RS06140	0.56	+0.0
1,516,083	-		CA265_RS06140	0.56	-0.1
1,516,149	+		CA265_RS06140	0.75	-0.2
1,516,242	+				-0.9
1,516,243	-				+0.1
1,516,310	-				+0.2
1,516,362	-				+1.4
1,516,362	-				+0.1
1,516,417	+				-0.4
1,516,417	+				+0.3
1,516,423	-				+0.7
1,516,452	-				+0.7
1,516,493	-				+0.0
1,516,596	-				-0.4
1,516,623	-				-0.5
1,516,709	-		CA265_RS06145	0.14	+1.1
1,516,882	+		CA265_RS06145	0.23	-0.1
1,516,883	-		CA265_RS06145	0.23	+0.8
1,516,889	+		CA265_RS06145	0.23	-0.2
1,516,947	-		CA265_RS06145	0.26	-0.2
1,516,950	+		CA265_RS06145	0.26	-0.6
1,516,952	+		CA265_RS06145	0.26	+0.4
1,516,953	-		CA265_RS06145	0.26	-0.5
1,516,953	-		CA265_RS06145	0.26	+0.4
1,516,999	-		CA265_RS06145	0.29	+0.1
1,517,033	+		CA265_RS06145	0.30	-0.3
1,517,034	-		CA265_RS06145	0.31	-1.8
1,517,172	+		CA265_RS06145	0.37	+0.1