Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3215 and Ac3H11_3216 are separated by 16 nucleotides Ac3H11_3216 and Ac3H11_3217 are separated by 405 nucleotides
Ac3H11_3215 - TsaD/Kae1/Qri7 protein, required for threonylcarbamoyladenosine t(6)A37 formation in tRNA, at 120,237 to 121,277
_3215
Ac3H11_3216 - Flagellar hook-length control protein FliK, at 121,294 to 125,079
_3216
Ac3H11_3217 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 125,485 to 126,645
_3217
Position (kb) 121
122
123
124
125
126 Strain fitness (log2 ratio) -2
-1
0
1
2 at 122.267 kb on + strand, within Ac3H11_3216 at 122.268 kb on - strand, within Ac3H11_3216 at 122.268 kb on - strand, within Ac3H11_3216 at 122.268 kb on - strand, within Ac3H11_3216 at 122.321 kb on + strand, within Ac3H11_3216 at 122.322 kb on - strand, within Ac3H11_3216 at 122.322 kb on - strand, within Ac3H11_3216 at 122.322 kb on - strand, within Ac3H11_3216 at 122.570 kb on + strand, within Ac3H11_3216 at 122.571 kb on - strand, within Ac3H11_3216 at 122.740 kb on - strand, within Ac3H11_3216 at 122.776 kb on + strand, within Ac3H11_3216 at 122.776 kb on + strand, within Ac3H11_3216 at 122.777 kb on - strand, within Ac3H11_3216 at 122.777 kb on - strand, within Ac3H11_3216 at 122.777 kb on - strand, within Ac3H11_3216 at 122.874 kb on - strand, within Ac3H11_3216 at 122.874 kb on - strand, within Ac3H11_3216 at 123.176 kb on + strand, within Ac3H11_3216 at 123.176 kb on + strand, within Ac3H11_3216 at 123.408 kb on + strand, within Ac3H11_3216 at 123.479 kb on + strand, within Ac3H11_3216 at 123.479 kb on + strand, within Ac3H11_3216 at 123.480 kb on - strand, within Ac3H11_3216 at 123.480 kb on - strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.782 kb on + strand, within Ac3H11_3216 at 123.783 kb on - strand, within Ac3H11_3216 at 123.783 kb on - strand, within Ac3H11_3216 at 123.783 kb on - strand, within Ac3H11_3216 at 123.805 kb on + strand, within Ac3H11_3216 at 123.805 kb on + strand, within Ac3H11_3216 at 123.805 kb on + strand, within Ac3H11_3216 at 123.806 kb on - strand, within Ac3H11_3216 at 123.892 kb on - strand, within Ac3H11_3216 at 123.892 kb on - strand, within Ac3H11_3216 at 123.926 kb on + strand, within Ac3H11_3216 at 124.194 kb on + strand, within Ac3H11_3216 at 124.194 kb on + strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.195 kb on - strand, within Ac3H11_3216 at 124.298 kb on + strand, within Ac3H11_3216 at 124.298 kb on + strand, within Ac3H11_3216 at 124.419 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.433 kb on + strand, within Ac3H11_3216 at 124.434 kb on - strand, within Ac3H11_3216 at 124.434 kb on - strand, within Ac3H11_3216 at 124.434 kb on - strand, within Ac3H11_3216 at 124.550 kb on + strand, within Ac3H11_3216 at 124.550 kb on + strand, within Ac3H11_3216 at 124.551 kb on - strand, within Ac3H11_3216 at 124.551 kb on - strand, within Ac3H11_3216 at 124.570 kb on - strand, within Ac3H11_3216 at 124.705 kb on + strand at 124.706 kb on - strand at 124.706 kb on - strand at 124.706 kb on - strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.709 kb on + strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.710 kb on - strand at 124.788 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.790 kb on + strand at 124.791 kb on - strand at 124.791 kb on - strand at 124.791 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.846 kb on - strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.987 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 124.991 kb on + strand at 125.091 kb on - strand at 125.096 kb on + strand at 125.121 kb on + strand at 125.121 kb on + strand at 125.122 kb on - strand at 125.122 kb on - strand at 125.142 kb on + strand at 125.143 kb on - strand at 125.173 kb on + strand at 125.174 kb on - strand at 125.174 kb on - strand at 125.174 kb on - strand at 125.302 kb on + strand at 125.302 kb on + strand at 125.369 kb on - strand at 125.373 kb on - strand at 125.373 kb on - strand at 125.415 kb on + strand at 125.448 kb on + strand at 125.449 kb on - strand at 125.449 kb on - strand at 125.486 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.537 kb on + strand at 125.538 kb on - strand at 125.556 kb on - strand at 125.556 kb on - strand at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.687 kb on + strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.688 kb on - strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.699 kb on + strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.700 kb on - strand, within Ac3H11_3217 at 125.705 kb on + strand, within Ac3H11_3217 at 125.705 kb on + strand, within Ac3H11_3217 at 125.706 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.748 kb on - strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.810 kb on + strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217 at 125.811 kb on - strand, within Ac3H11_3217
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 122,267 + Ac3H11_3216 0.26 +0.0 122,268 - Ac3H11_3216 0.26 -0.7 122,268 - Ac3H11_3216 0.26 +0.5 122,268 - Ac3H11_3216 0.26 +0.2 122,321 + Ac3H11_3216 0.27 -0.6 122,322 - Ac3H11_3216 0.27 -0.1 122,322 - Ac3H11_3216 0.27 +0.6 122,322 - Ac3H11_3216 0.27 +0.7 122,570 + Ac3H11_3216 0.34 +0.2 122,571 - Ac3H11_3216 0.34 -0.8 122,740 - Ac3H11_3216 0.38 -0.1 122,776 + Ac3H11_3216 0.39 +0.3 122,776 + Ac3H11_3216 0.39 +1.1 122,777 - Ac3H11_3216 0.39 -1.1 122,777 - Ac3H11_3216 0.39 -0.2 122,777 - Ac3H11_3216 0.39 -0.2 122,874 - Ac3H11_3216 0.42 -0.5 122,874 - Ac3H11_3216 0.42 +0.1 123,176 + Ac3H11_3216 0.50 +0.6 123,176 + Ac3H11_3216 0.50 +0.7 123,408 + Ac3H11_3216 0.56 +0.5 123,479 + Ac3H11_3216 0.58 +0.8 123,479 + Ac3H11_3216 0.58 -0.6 123,480 - Ac3H11_3216 0.58 -0.0 123,480 - Ac3H11_3216 0.58 -0.2 123,782 + Ac3H11_3216 0.66 -1.1 123,782 + Ac3H11_3216 0.66 -0.3 123,782 + Ac3H11_3216 0.66 +0.5 123,782 + Ac3H11_3216 0.66 -0.8 123,782 + Ac3H11_3216 0.66 -0.2 123,783 - Ac3H11_3216 0.66 +0.7 123,783 - Ac3H11_3216 0.66 -0.3 123,783 - Ac3H11_3216 0.66 +0.6 123,805 + Ac3H11_3216 0.66 -0.5 123,805 + Ac3H11_3216 0.66 -1.0 123,805 + Ac3H11_3216 0.66 -2.6 123,806 - Ac3H11_3216 0.66 +0.1 123,892 - Ac3H11_3216 0.69 +1.3 123,892 - Ac3H11_3216 0.69 -0.4 123,926 + Ac3H11_3216 0.70 +1.1 124,194 + Ac3H11_3216 0.77 -0.3 124,194 + Ac3H11_3216 0.77 +0.4 124,195 - Ac3H11_3216 0.77 -0.3 124,195 - Ac3H11_3216 0.77 +1.4 124,195 - Ac3H11_3216 0.77 +0.1 124,195 - Ac3H11_3216 0.77 +1.2 124,195 - Ac3H11_3216 0.77 -0.4 124,298 + Ac3H11_3216 0.79 +0.4 124,298 + Ac3H11_3216 0.79 +0.6 124,419 + Ac3H11_3216 0.83 -1.2 124,433 + Ac3H11_3216 0.83 +0.2 124,433 + Ac3H11_3216 0.83 +0.9 124,433 + Ac3H11_3216 0.83 -0.7 124,433 + Ac3H11_3216 0.83 +0.5 124,433 + Ac3H11_3216 0.83 +0.6 124,433 + Ac3H11_3216 0.83 -1.0 124,434 - Ac3H11_3216 0.83 +0.6 124,434 - Ac3H11_3216 0.83 +0.5 124,434 - Ac3H11_3216 0.83 +0.7 124,550 + Ac3H11_3216 0.86 -1.5 124,550 + Ac3H11_3216 0.86 +0.4 124,551 - Ac3H11_3216 0.86 +2.2 124,551 - Ac3H11_3216 0.86 -0.1 124,570 - Ac3H11_3216 0.87 +0.1 124,705 + +0.2 124,706 - +0.2 124,706 - +0.6 124,706 - +0.2 124,709 + -1.5 124,709 + -0.1 124,709 + +0.4 124,709 + +0.1 124,709 + -0.3 124,709 + +0.2 124,709 + +0.2 124,709 + +0.1 124,709 + -0.4 124,709 + -1.5 124,709 + -1.4 124,709 + +0.6 124,709 + +1.3 124,709 + +0.2 124,709 + -0.9 124,709 + +0.2 124,709 + +0.8 124,709 + +0.3 124,709 + -1.4 124,709 + +0.5 124,709 + +1.3 124,710 - -0.3 124,710 - -0.3 124,710 - +0.5 124,710 - -0.4 124,710 - +0.3 124,710 - -1.0 124,710 - +0.3 124,710 - -0.8 124,710 - -0.1 124,710 - +0.0 124,710 - +0.3 124,710 - -0.0 124,710 - -1.6 124,710 - +0.3 124,710 - -0.1 124,710 - -0.1 124,710 - +0.3 124,788 + +0.6 124,790 + +0.6 124,790 + -0.9 124,790 + -2.1 124,790 + -1.1 124,790 + +0.7 124,790 + -0.3 124,791 - +0.4 124,791 - -0.8 124,791 - +0.6 124,846 - +1.3 124,846 - -0.3 124,846 - -0.5 124,846 - -0.6 124,987 + +1.3 124,987 + +0.7 124,987 + +0.2 124,987 + -0.4 124,991 + +0.3 124,991 + +0.8 124,991 + -0.4 124,991 + +0.2 124,991 + +0.3 124,991 + +0.9 124,991 + -0.5 125,091 - -0.3 125,096 + +0.3 125,121 + -0.7 125,121 + -0.3 125,122 - -0.1 125,122 - +1.1 125,142 + -0.1 125,143 - +0.5 125,173 + +0.0 125,174 - +0.5 125,174 - +0.3 125,174 - -0.6 125,302 + -0.8 125,302 + -0.3 125,369 - +0.9 125,373 - -0.7 125,373 - -1.2 125,415 + +1.4 125,448 + +0.3 125,449 - -0.0 125,449 - +1.2 125,486 + +0.1 125,537 + -0.0 125,537 + +1.2 125,537 + +0.0 125,537 + +0.6 125,537 + -0.4 125,537 + -0.3 125,537 + +0.2 125,537 + +0.4 125,537 + +1.0 125,537 + -1.3 125,538 - +1.2 125,556 - +0.7 125,556 - -0.4 125,687 + Ac3H11_3217 0.17 -0.3 125,687 + Ac3H11_3217 0.17 +0.3 125,687 + Ac3H11_3217 0.17 +0.2 125,687 + Ac3H11_3217 0.17 -1.0 125,687 + Ac3H11_3217 0.17 -0.2 125,687 + Ac3H11_3217 0.17 -2.0 125,687 + Ac3H11_3217 0.17 -0.4 125,688 - Ac3H11_3217 0.17 -0.4 125,688 - Ac3H11_3217 0.17 +0.7 125,688 - Ac3H11_3217 0.17 -0.7 125,688 - Ac3H11_3217 0.17 +0.0 125,688 - Ac3H11_3217 0.17 -1.1 125,688 - Ac3H11_3217 0.17 -1.3 125,699 + Ac3H11_3217 0.18 -1.1 125,699 + Ac3H11_3217 0.18 +0.0 125,699 + Ac3H11_3217 0.18 -0.2 125,699 + Ac3H11_3217 0.18 +0.4 125,700 - Ac3H11_3217 0.19 +1.5 125,700 - Ac3H11_3217 0.19 +0.5 125,700 - Ac3H11_3217 0.19 -0.4 125,705 + Ac3H11_3217 0.19 +0.1 125,705 + Ac3H11_3217 0.19 -1.0 125,706 - Ac3H11_3217 0.19 -0.3 125,748 - Ac3H11_3217 0.23 +0.8 125,748 - Ac3H11_3217 0.23 +0.1 125,748 - Ac3H11_3217 0.23 +1.4 125,810 + Ac3H11_3217 0.28 -0.2 125,810 + Ac3H11_3217 0.28 -0.9 125,810 + Ac3H11_3217 0.28 +0.0 125,810 + Ac3H11_3217 0.28 -0.4 125,810 + Ac3H11_3217 0.28 +0.9 125,810 + Ac3H11_3217 0.28 +0.4 125,810 + Ac3H11_3217 0.28 +0.7 125,810 + Ac3H11_3217 0.28 -0.7 125,810 + Ac3H11_3217 0.28 -0.3 125,810 + Ac3H11_3217 0.28 +0.3 125,810 + Ac3H11_3217 0.28 -0.4 125,810 + Ac3H11_3217 0.28 +0.6 125,811 - Ac3H11_3217 0.28 +0.1 125,811 - Ac3H11_3217 0.28 +0.5 125,811 - Ac3H11_3217 0.28 +0.6 125,811 - Ac3H11_3217 0.28 +0.8 125,811 - Ac3H11_3217 0.28 +0.6 125,811 - Ac3H11_3217 0.28 +0.7 125,811 - Ac3H11_3217 0.28 +0.3 125,811 - Ac3H11_3217 0.28 +0.1 125,811 - Ac3H11_3217 0.28 -0.5 125,811 - Ac3H11_3217 0.28 +0.7 125,811 - Ac3H11_3217 0.28 +0.9
Or see this region's nucleotide sequence