Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_2730

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_2729 and Ac3H11_2730 are separated by 182 nucleotidesAc3H11_2730 and Ac3H11_2731 are separated by 259 nucleotidesAc3H11_2731 and Ac3H11_2732 overlap by 4 nucleotides Ac3H11_2729 - hypothetical protein, at 1,030,870 to 1,031,901 _2729 Ac3H11_2730 - hypothetical protein, at 1,032,084 to 1,032,266 _2730 Ac3H11_2731 - hypothetical protein, at 1,032,526 to 1,032,951 _2731 Ac3H11_2732 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 1,032,948 to 1,033,784 _2732 Position (kb) 1032 1033Strain fitness (log2 ratio) -1 0 1 2at 1031.335 kb on + strand, within Ac3H11_2729at 1031.336 kb on - strand, within Ac3H11_2729at 1031.366 kb on - strand, within Ac3H11_2729at 1031.380 kb on + strand, within Ac3H11_2729at 1031.380 kb on + strand, within Ac3H11_2729at 1031.381 kb on - strand, within Ac3H11_2729at 1031.534 kb on - strand, within Ac3H11_2729at 1031.534 kb on - strand, within Ac3H11_2729at 1031.534 kb on - strand, within Ac3H11_2729at 1031.651 kb on + strand, within Ac3H11_2729at 1031.651 kb on + strand, within Ac3H11_2729at 1032.026 kb on - strandat 1032.037 kb on - strandat 1032.037 kb on - strandat 1032.037 kb on - strandat 1032.211 kb on + strand, within Ac3H11_2730at 1032.211 kb on + strand, within Ac3H11_2730at 1032.213 kb on + strand, within Ac3H11_2730at 1032.418 kb on + strandat 1032.517 kb on + strandat 1032.656 kb on - strand, within Ac3H11_2731at 1032.706 kb on + strand, within Ac3H11_2731at 1032.706 kb on + strand, within Ac3H11_2731at 1032.706 kb on - strand, within Ac3H11_2731at 1032.707 kb on - strand, within Ac3H11_2731at 1032.707 kb on - strand, within Ac3H11_2731at 1032.833 kb on - strand, within Ac3H11_2731at 1032.866 kb on - strand, within Ac3H11_2731at 1033.232 kb on + strand, within Ac3H11_2732at 1033.232 kb on + strand, within Ac3H11_2732at 1033.232 kb on + strand, within Ac3H11_2732

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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1,031,335 + Ac3H11_2729 0.45 -0.3
1,031,336 - Ac3H11_2729 0.45 -0.5
1,031,366 - Ac3H11_2729 0.48 -0.2
1,031,380 + Ac3H11_2729 0.49 +0.2
1,031,380 + Ac3H11_2729 0.49 +0.3
1,031,381 - Ac3H11_2729 0.50 +0.3
1,031,534 - Ac3H11_2729 0.64 +0.9
1,031,534 - Ac3H11_2729 0.64 +0.0
1,031,534 - Ac3H11_2729 0.64 +0.4
1,031,651 + Ac3H11_2729 0.76 +0.1
1,031,651 + Ac3H11_2729 0.76 +1.6
1,032,026 - +0.0
1,032,037 - -0.8
1,032,037 - +1.4
1,032,037 - -1.4
1,032,211 + Ac3H11_2730 0.69 -0.4
1,032,211 + Ac3H11_2730 0.69 -1.0
1,032,213 + Ac3H11_2730 0.70 -0.6
1,032,418 + +0.2
1,032,517 + -1.7
1,032,656 - Ac3H11_2731 0.31 +0.5
1,032,706 + Ac3H11_2731 0.42 -1.4
1,032,706 + Ac3H11_2731 0.42 +0.3
1,032,706 - Ac3H11_2731 0.42 +0.8
1,032,707 - Ac3H11_2731 0.42 +0.6
1,032,707 - Ac3H11_2731 0.42 -1.4
1,032,833 - Ac3H11_2731 0.72 +0.5
1,032,866 - Ac3H11_2731 0.80 +0.2
1,033,232 + Ac3H11_2732 0.34 -0.5
1,033,232 + Ac3H11_2732 0.34 -0.0
1,033,232 + Ac3H11_2732 0.34 +2.0

Or see this region's nucleotide sequence