Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2729 and Ac3H11_2730 are separated by 182 nucleotides Ac3H11_2730 and Ac3H11_2731 are separated by 259 nucleotides Ac3H11_2731 and Ac3H11_2732 overlap by 4 nucleotides
Ac3H11_2729 - hypothetical protein, at 1,030,870 to 1,031,901
_2729
Ac3H11_2730 - hypothetical protein, at 1,032,084 to 1,032,266
_2730
Ac3H11_2731 - hypothetical protein, at 1,032,526 to 1,032,951
_2731
Ac3H11_2732 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 1,032,948 to 1,033,784
_2732
Position (kb)
1032
1033 Strain fitness (log2 ratio)
-1
0
1
2 at 1031.335 kb on + strand, within Ac3H11_2729 at 1031.336 kb on - strand, within Ac3H11_2729 at 1031.366 kb on - strand, within Ac3H11_2729 at 1031.380 kb on + strand, within Ac3H11_2729 at 1031.380 kb on + strand, within Ac3H11_2729 at 1031.381 kb on - strand, within Ac3H11_2729 at 1031.534 kb on - strand, within Ac3H11_2729 at 1031.534 kb on - strand, within Ac3H11_2729 at 1031.534 kb on - strand, within Ac3H11_2729 at 1031.651 kb on + strand, within Ac3H11_2729 at 1031.651 kb on + strand, within Ac3H11_2729 at 1032.026 kb on - strand at 1032.037 kb on - strand at 1032.037 kb on - strand at 1032.037 kb on - strand at 1032.211 kb on + strand, within Ac3H11_2730 at 1032.211 kb on + strand, within Ac3H11_2730 at 1032.213 kb on + strand, within Ac3H11_2730 at 1032.418 kb on + strand at 1032.517 kb on + strand at 1032.656 kb on - strand, within Ac3H11_2731 at 1032.706 kb on + strand, within Ac3H11_2731 at 1032.706 kb on + strand, within Ac3H11_2731 at 1032.706 kb on - strand, within Ac3H11_2731 at 1032.707 kb on - strand, within Ac3H11_2731 at 1032.707 kb on - strand, within Ac3H11_2731 at 1032.833 kb on - strand, within Ac3H11_2731 at 1032.866 kb on - strand, within Ac3H11_2731 at 1033.232 kb on + strand, within Ac3H11_2732 at 1033.232 kb on + strand, within Ac3H11_2732 at 1033.232 kb on + strand, within Ac3H11_2732
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,031,335 + Ac3H11_2729 0.45 -0.3 1,031,336 - Ac3H11_2729 0.45 -0.5 1,031,366 - Ac3H11_2729 0.48 -0.2 1,031,380 + Ac3H11_2729 0.49 +0.2 1,031,380 + Ac3H11_2729 0.49 +0.3 1,031,381 - Ac3H11_2729 0.50 +0.3 1,031,534 - Ac3H11_2729 0.64 +0.9 1,031,534 - Ac3H11_2729 0.64 +0.0 1,031,534 - Ac3H11_2729 0.64 +0.4 1,031,651 + Ac3H11_2729 0.76 +0.1 1,031,651 + Ac3H11_2729 0.76 +1.6 1,032,026 - +0.0 1,032,037 - -0.8 1,032,037 - +1.4 1,032,037 - -1.4 1,032,211 + Ac3H11_2730 0.69 -0.4 1,032,211 + Ac3H11_2730 0.69 -1.0 1,032,213 + Ac3H11_2730 0.70 -0.6 1,032,418 + +0.2 1,032,517 + -1.7 1,032,656 - Ac3H11_2731 0.31 +0.5 1,032,706 + Ac3H11_2731 0.42 -1.4 1,032,706 + Ac3H11_2731 0.42 +0.3 1,032,706 - Ac3H11_2731 0.42 +0.8 1,032,707 - Ac3H11_2731 0.42 +0.6 1,032,707 - Ac3H11_2731 0.42 -1.4 1,032,833 - Ac3H11_2731 0.72 +0.5 1,032,866 - Ac3H11_2731 0.80 +0.2 1,033,232 + Ac3H11_2732 0.34 -0.5 1,033,232 + Ac3H11_2732 0.34 -0.0 1,033,232 + Ac3H11_2732 0.34 +2.0
Or see this region's nucleotide sequence