Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2651 and Ac3H11_2652 overlap by 4 nucleotides
Ac3H11_2651 - hypothetical protein, at 944,381 to 944,656
_2651
Ac3H11_2652 - Rod shape determination protein, at 944,653 to 945,684
_2652
Position (kb) 944
945
946 Strain fitness (log2 ratio) -1
0
1
2 at 943.707 kb on - strand at 943.732 kb on - strand at 943.793 kb on - strand at 943.793 kb on - strand at 943.794 kb on + strand at 943.794 kb on + strand at 943.794 kb on + strand at 943.794 kb on + strand at 943.794 kb on + strand at 943.795 kb on - strand at 943.849 kb on + strand at 943.849 kb on + strand at 943.849 kb on + strand at 943.849 kb on + strand at 943.849 kb on + strand at 943.849 kb on + strand at 943.850 kb on - strand at 943.850 kb on - strand at 943.866 kb on - strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.911 kb on + strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.912 kb on - strand at 943.985 kb on - strand at 944.054 kb on + strand at 944.054 kb on + strand at 944.055 kb on - strand at 944.055 kb on - strand at 944.057 kb on + strand at 944.057 kb on + strand at 944.057 kb on + strand at 944.058 kb on - strand at 944.058 kb on - strand at 944.494 kb on - strand, within Ac3H11_2651 at 944.514 kb on + strand, within Ac3H11_2651 at 944.514 kb on + strand, within Ac3H11_2651 at 944.577 kb on + strand, within Ac3H11_2651 at 944.577 kb on + strand, within Ac3H11_2651 at 944.578 kb on - strand, within Ac3H11_2651 at 944.578 kb on - strand, within Ac3H11_2651 at 944.578 kb on - strand, within Ac3H11_2651 at 944.708 kb on + strand at 944.708 kb on + strand at 944.709 kb on - strand at 944.709 kb on - strand at 944.709 kb on - strand at 944.939 kb on + strand, within Ac3H11_2652 at 944.939 kb on + strand, within Ac3H11_2652 at 945.000 kb on - strand, within Ac3H11_2652 at 945.413 kb on + strand, within Ac3H11_2652 at 945.413 kb on + strand, within Ac3H11_2652 at 945.431 kb on + strand, within Ac3H11_2652 at 945.431 kb on + strand, within Ac3H11_2652 at 945.432 kb on - strand, within Ac3H11_2652 at 945.432 kb on - strand, within Ac3H11_2652 at 945.432 kb on - strand, within Ac3H11_2652 at 945.498 kb on - strand, within Ac3H11_2652 at 945.498 kb on - strand, within Ac3H11_2652 at 945.699 kb on + strand at 945.700 kb on - strand at 946.040 kb on - strand at 946.040 kb on - strand at 946.040 kb on - strand at 946.040 kb on - strand at 946.151 kb on + strand at 946.152 kb on - strand at 946.289 kb on + strand at 946.401 kb on + strand at 946.401 kb on + strand at 946.561 kb on + strand at 946.648 kb on + strand at 946.648 kb on + strand at 946.649 kb on - strand at 946.649 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 943,707 - -0.7 943,732 - -0.2 943,793 - +0.2 943,793 - -0.3 943,794 + -0.2 943,794 + -0.4 943,794 + -0.7 943,794 + +0.3 943,794 + -0.7 943,795 - -0.3 943,849 + -0.3 943,849 + -0.1 943,849 + -0.3 943,849 + -0.5 943,849 + +0.1 943,849 + +0.9 943,850 - +0.5 943,850 - +0.2 943,866 - +0.2 943,911 + -0.5 943,911 + -0.3 943,911 + -0.3 943,911 + -0.7 943,911 + +1.0 943,911 + -0.5 943,911 + +1.2 943,911 + +0.4 943,911 + -1.2 943,911 + +0.2 943,911 + +0.4 943,911 + +0.5 943,912 - -0.0 943,912 - +2.1 943,912 - +0.6 943,912 - -0.1 943,912 - +0.8 943,912 - +0.6 943,912 - -0.2 943,912 - +0.6 943,912 - +0.0 943,912 - -0.3 943,912 - +0.1 943,912 - +1.6 943,912 - +1.4 943,912 - +0.2 943,912 - +0.2 943,985 - -0.8 944,054 + -0.8 944,054 + +0.5 944,055 - +0.2 944,055 - +0.5 944,057 + -0.3 944,057 + -0.2 944,057 + -0.1 944,058 - -1.0 944,058 - +0.4 944,494 - Ac3H11_2651 0.41 -0.3 944,514 + Ac3H11_2651 0.48 +0.4 944,514 + Ac3H11_2651 0.48 -0.6 944,577 + Ac3H11_2651 0.71 +0.6 944,577 + Ac3H11_2651 0.71 +2.2 944,578 - Ac3H11_2651 0.71 +0.5 944,578 - Ac3H11_2651 0.71 -1.4 944,578 - Ac3H11_2651 0.71 -1.0 944,708 + -1.3 944,708 + +0.2 944,709 - +0.1 944,709 - +0.5 944,709 - -0.5 944,939 + Ac3H11_2652 0.28 +0.6 944,939 + Ac3H11_2652 0.28 +0.3 945,000 - Ac3H11_2652 0.34 -1.4 945,413 + Ac3H11_2652 0.74 +0.1 945,413 + Ac3H11_2652 0.74 -0.6 945,431 + Ac3H11_2652 0.75 -0.1 945,431 + Ac3H11_2652 0.75 -0.6 945,432 - Ac3H11_2652 0.75 +0.7 945,432 - Ac3H11_2652 0.75 +0.3 945,432 - Ac3H11_2652 0.75 +0.9 945,498 - Ac3H11_2652 0.82 +0.1 945,498 - Ac3H11_2652 0.82 +0.1 945,699 + -0.4 945,700 - -0.2 946,040 - +0.0 946,040 - +0.7 946,040 - -0.0 946,040 - -0.1 946,151 + +0.3 946,152 - -0.2 946,289 + -0.3 946,401 + +0.5 946,401 + +0.1 946,561 + -0.6 946,648 + +0.1 946,648 + +0.3 946,649 - +0.1 946,649 - +0.5
Or see this region's nucleotide sequence