Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_1689

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAc3H11_1687 and Ac3H11_1688 are separated by 13 nucleotidesAc3H11_1688 and Ac3H11_1689 are separated by 136 nucleotidesAc3H11_1689 and Ac3H11_1690 are separated by 19 nucleotidesAc3H11_1690 and Ac3H11_1691 are separated by 165 nucleotides Ac3H11_1687 - Phosphinothricin N-acetyltransferase, at 288,896 to 289,300 _1687 Ac3H11_1688 - Probable transmembrane protein, at 289,314 to 289,760 _1688 Ac3H11_1689 - Probable low-affinity inorganic phosphate transporter, at 289,897 to 290,907 _1689 Ac3H11_1690 - Phosphate transport regulator (distant homolog of PhoU), at 290,927 to 291,574 _1690 Ac3H11_1691 - hypothetical protein, at 291,740 to 292,102 _1691 Position (kb) 289 290 291Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 288.980 kb on + strand, within Ac3H11_1687at 288.981 kb on - strand, within Ac3H11_1687at 288.981 kb on - strand, within Ac3H11_1687at 289.010 kb on + strand, within Ac3H11_1687at 289.011 kb on - strand, within Ac3H11_1687at 289.037 kb on + strand, within Ac3H11_1687at 289.037 kb on + strand, within Ac3H11_1687at 289.037 kb on + strand, within Ac3H11_1687at 289.037 kb on + strand, within Ac3H11_1687at 289.037 kb on + strand, within Ac3H11_1687at 289.037 kb on + strand, within Ac3H11_1687at 289.037 kb on + strand, within Ac3H11_1687at 289.037 kb on + strand, within Ac3H11_1687at 289.038 kb on - strand, within Ac3H11_1687at 289.038 kb on - strand, within Ac3H11_1687at 289.038 kb on - strand, within Ac3H11_1687at 289.038 kb on - strand, within Ac3H11_1687at 289.038 kb on - strand, within Ac3H11_1687at 289.038 kb on - strand, within Ac3H11_1687at 289.038 kb on - strand, within Ac3H11_1687at 289.165 kb on + strand, within Ac3H11_1687at 289.165 kb on + strand, within Ac3H11_1687at 289.165 kb on + strand, within Ac3H11_1687at 289.166 kb on - strand, within Ac3H11_1687at 289.166 kb on - strand, within Ac3H11_1687at 289.166 kb on - strand, within Ac3H11_1687at 289.166 kb on - strand, within Ac3H11_1687at 289.166 kb on - strand, within Ac3H11_1687at 289.166 kb on - strand, within Ac3H11_1687at 289.192 kb on + strand, within Ac3H11_1687at 289.251 kb on + strand, within Ac3H11_1687at 289.251 kb on + strand, within Ac3H11_1687at 289.251 kb on + strand, within Ac3H11_1687at 289.251 kb on + strand, within Ac3H11_1687at 289.251 kb on + strand, within Ac3H11_1687at 289.251 kb on + strand, within Ac3H11_1687at 289.252 kb on - strand, within Ac3H11_1687at 289.252 kb on - strand, within Ac3H11_1687at 289.252 kb on - strand, within Ac3H11_1687at 289.252 kb on - strand, within Ac3H11_1687at 289.252 kb on - strand, within Ac3H11_1687at 289.252 kb on - strand, within Ac3H11_1687at 289.252 kb on - strand, within Ac3H11_1687at 289.252 kb on - strand, within Ac3H11_1687at 289.380 kb on + strand, within Ac3H11_1688at 289.380 kb on + strand, within Ac3H11_1688at 289.381 kb on - strand, within Ac3H11_1688at 289.381 kb on - strand, within Ac3H11_1688at 289.443 kb on + strand, within Ac3H11_1688at 289.443 kb on + strand, within Ac3H11_1688at 289.444 kb on - strand, within Ac3H11_1688at 289.444 kb on - strand, within Ac3H11_1688at 289.444 kb on - strand, within Ac3H11_1688at 289.444 kb on - strand, within Ac3H11_1688at 289.444 kb on - strand, within Ac3H11_1688at 289.587 kb on + strand, within Ac3H11_1688at 289.587 kb on + strand, within Ac3H11_1688at 289.588 kb on - strand, within Ac3H11_1688at 289.717 kb on - strandat 289.786 kb on - strandat 289.923 kb on - strandat 290.222 kb on + strand, within Ac3H11_1689at 290.222 kb on + strand, within Ac3H11_1689at 290.223 kb on - strand, within Ac3H11_1689at 290.223 kb on - strand, within Ac3H11_1689at 290.223 kb on - strand, within Ac3H11_1689at 290.223 kb on - strand, within Ac3H11_1689at 290.223 kb on - strand, within Ac3H11_1689at 290.273 kb on + strand, within Ac3H11_1689at 290.348 kb on + strand, within Ac3H11_1689at 290.348 kb on + strandat 290.348 kb on + strand, within Ac3H11_1689at 290.349 kb on - strand, within Ac3H11_1689at 290.600 kb on + strand, within Ac3H11_1689at 290.600 kb on + strand, within Ac3H11_1689at 290.601 kb on - strand, within Ac3H11_1689at 290.601 kb on - strand, within Ac3H11_1689at 290.603 kb on + strand, within Ac3H11_1689at 290.603 kb on + strand, within Ac3H11_1689at 290.604 kb on - strand, within Ac3H11_1689at 290.896 kb on + strandat 291.006 kb on + strand, within Ac3H11_1690at 291.006 kb on + strand, within Ac3H11_1690at 291.006 kb on + strand, within Ac3H11_1690at 291.006 kb on + strand, within Ac3H11_1690at 291.006 kb on + strand, within Ac3H11_1690at 291.006 kb on + strand, within Ac3H11_1690at 291.007 kb on - strand, within Ac3H11_1690at 291.007 kb on - strand, within Ac3H11_1690at 291.007 kb on - strand, within Ac3H11_1690at 291.007 kb on - strand, within Ac3H11_1690at 291.007 kb on - strand, within Ac3H11_1690at 291.258 kb on + strand, within Ac3H11_1690at 291.435 kb on + strand, within Ac3H11_1690at 291.435 kb on + strand, within Ac3H11_1690at 291.436 kb on - strand, within Ac3H11_1690at 291.436 kb on - strand, within Ac3H11_1690at 291.436 kb on - strand, within Ac3H11_1690at 291.436 kb on - strand, within Ac3H11_1690at 291.436 kb on - strand, within Ac3H11_1690at 291.462 kb on + strand, within Ac3H11_1690at 291.462 kb on + strand, within Ac3H11_1690at 291.463 kb on - strand, within Ac3H11_1690at 291.463 kb on - strand, within Ac3H11_1690at 291.660 kb on - strandat 291.762 kb on + strandat 291.762 kb on + strandat 291.762 kb on + strandat 291.762 kb on + strandat 291.763 kb on - strandat 291.763 kb on - strandat 291.763 kb on - strandat 291.763 kb on - strandat 291.763 kb on - strandat 291.798 kb on + strand, within Ac3H11_1691at 291.799 kb on - strand, within Ac3H11_1691at 291.799 kb on - strand, within Ac3H11_1691at 291.825 kb on + strand, within Ac3H11_1691at 291.825 kb on + strand, within Ac3H11_1691at 291.825 kb on + strand, within Ac3H11_1691at 291.825 kb on + strand, within Ac3H11_1691at 291.825 kb on + strand, within Ac3H11_1691at 291.825 kb on + strand, within Ac3H11_1691at 291.825 kb on + strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.826 kb on - strand, within Ac3H11_1691at 291.906 kb on + strand, within Ac3H11_1691at 291.907 kb on - strand, within Ac3H11_1691

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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288,980 + Ac3H11_1687 0.21 +0.3
288,981 - Ac3H11_1687 0.21 +0.2
288,981 - Ac3H11_1687 0.21 -1.1
289,010 + Ac3H11_1687 0.28 -0.2
289,011 - Ac3H11_1687 0.28 -0.8
289,037 + Ac3H11_1687 0.35 +2.0
289,037 + Ac3H11_1687 0.35 -0.5
289,037 + Ac3H11_1687 0.35 +0.2
289,037 + Ac3H11_1687 0.35 -0.5
289,037 + Ac3H11_1687 0.35 +1.5
289,037 + Ac3H11_1687 0.35 +0.6
289,037 + Ac3H11_1687 0.35 +0.8
289,037 + Ac3H11_1687 0.35 +0.3
289,038 - Ac3H11_1687 0.35 -0.5
289,038 - Ac3H11_1687 0.35 -2.0
289,038 - Ac3H11_1687 0.35 -0.5
289,038 - Ac3H11_1687 0.35 -0.6
289,038 - Ac3H11_1687 0.35 -1.0
289,038 - Ac3H11_1687 0.35 -0.4
289,038 - Ac3H11_1687 0.35 -0.8
289,165 + Ac3H11_1687 0.66 +0.3
289,165 + Ac3H11_1687 0.66 -0.0
289,165 + Ac3H11_1687 0.66 +0.5
289,166 - Ac3H11_1687 0.67 -1.5
289,166 - Ac3H11_1687 0.67 -1.3
289,166 - Ac3H11_1687 0.67 -1.6
289,166 - Ac3H11_1687 0.67 -0.8
289,166 - Ac3H11_1687 0.67 -1.4
289,166 - Ac3H11_1687 0.67 +0.4
289,192 + Ac3H11_1687 0.73 -0.1
289,251 + Ac3H11_1687 0.88 -0.2
289,251 + Ac3H11_1687 0.88 +0.3
289,251 + Ac3H11_1687 0.88 +0.1
289,251 + Ac3H11_1687 0.88 -0.2
289,251 + Ac3H11_1687 0.88 +1.1
289,251 + Ac3H11_1687 0.88 +0.5
289,252 - Ac3H11_1687 0.88 +1.0
289,252 - Ac3H11_1687 0.88 -0.7
289,252 - Ac3H11_1687 0.88 +0.1
289,252 - Ac3H11_1687 0.88 -0.1
289,252 - Ac3H11_1687 0.88 -0.4
289,252 - Ac3H11_1687 0.88 +0.0
289,252 - Ac3H11_1687 0.88 -1.2
289,252 - Ac3H11_1687 0.88 -0.9
289,380 + Ac3H11_1688 0.15 -1.3
289,380 + Ac3H11_1688 0.15 -0.9
289,381 - Ac3H11_1688 0.15 -0.8
289,381 - Ac3H11_1688 0.15 -2.2
289,443 + Ac3H11_1688 0.29 -1.0
289,443 + Ac3H11_1688 0.29 -1.6
289,444 - Ac3H11_1688 0.29 -0.9
289,444 - Ac3H11_1688 0.29 -1.1
289,444 - Ac3H11_1688 0.29 -1.8
289,444 - Ac3H11_1688 0.29 -0.3
289,444 - Ac3H11_1688 0.29 +0.9
289,587 + Ac3H11_1688 0.61 -2.1
289,587 + Ac3H11_1688 0.61 -0.4
289,588 - Ac3H11_1688 0.61 -1.2
289,717 - -1.4
289,786 - +1.1
289,923 - -0.4
290,222 + Ac3H11_1689 0.32 -0.3
290,222 + Ac3H11_1689 0.32 -1.7
290,223 - Ac3H11_1689 0.32 -1.5
290,223 - Ac3H11_1689 0.32 -2.1
290,223 - Ac3H11_1689 0.32 -0.4
290,223 - Ac3H11_1689 0.32 -1.1
290,223 - Ac3H11_1689 0.32 -0.2
290,273 + Ac3H11_1689 0.37 -0.7
290,348 + Ac3H11_1689 0.45 -0.7
290,348 + -0.2
290,348 + Ac3H11_1689 0.45 -0.2
290,349 - Ac3H11_1689 0.45 +1.1
290,600 + Ac3H11_1689 0.70 -1.3
290,600 + Ac3H11_1689 0.70 -2.9
290,601 - Ac3H11_1689 0.70 -2.3
290,601 - Ac3H11_1689 0.70 -0.2
290,603 + Ac3H11_1689 0.70 -2.4
290,603 + Ac3H11_1689 0.70 -1.2
290,604 - Ac3H11_1689 0.70 -0.9
290,896 + +1.3
291,006 + Ac3H11_1690 0.12 -1.9
291,006 + Ac3H11_1690 0.12 -0.9
291,006 + Ac3H11_1690 0.12 -0.4
291,006 + Ac3H11_1690 0.12 -2.1
291,006 + Ac3H11_1690 0.12 +0.1
291,006 + Ac3H11_1690 0.12 -0.2
291,007 - Ac3H11_1690 0.12 +0.3
291,007 - Ac3H11_1690 0.12 -0.8
291,007 - Ac3H11_1690 0.12 +0.1
291,007 - Ac3H11_1690 0.12 -1.3
291,007 - Ac3H11_1690 0.12 -2.0
291,258 + Ac3H11_1690 0.51 -1.6
291,435 + Ac3H11_1690 0.78 -1.3
291,435 + Ac3H11_1690 0.78 -0.6
291,436 - Ac3H11_1690 0.79 -0.4
291,436 - Ac3H11_1690 0.79 -0.4
291,436 - Ac3H11_1690 0.79 -0.4
291,436 - Ac3H11_1690 0.79 -1.8
291,436 - Ac3H11_1690 0.79 -0.9
291,462 + Ac3H11_1690 0.83 -1.7
291,462 + Ac3H11_1690 0.83 -1.6
291,463 - Ac3H11_1690 0.83 -1.2
291,463 - Ac3H11_1690 0.83 -0.9
291,660 - -1.1
291,762 + -0.3
291,762 + +0.1
291,762 + -0.4
291,762 + -0.6
291,763 - -1.3
291,763 - -0.2
291,763 - -0.5
291,763 - -0.7
291,763 - -1.1
291,798 + Ac3H11_1691 0.16 +0.3
291,799 - Ac3H11_1691 0.16 +1.4
291,799 - Ac3H11_1691 0.16 -2.2
291,825 + Ac3H11_1691 0.23 +0.1
291,825 + Ac3H11_1691 0.23 -0.1
291,825 + Ac3H11_1691 0.23 +0.0
291,825 + Ac3H11_1691 0.23 -0.5
291,825 + Ac3H11_1691 0.23 -0.0
291,825 + Ac3H11_1691 0.23 +0.7
291,825 + Ac3H11_1691 0.23 +0.7
291,826 - Ac3H11_1691 0.24 -0.3
291,826 - Ac3H11_1691 0.24 -1.4
291,826 - Ac3H11_1691 0.24 -0.6
291,826 - Ac3H11_1691 0.24 -0.3
291,826 - Ac3H11_1691 0.24 +0.0
291,826 - Ac3H11_1691 0.24 +0.4
291,826 - Ac3H11_1691 0.24 -0.7
291,826 - Ac3H11_1691 0.24 -0.5
291,826 - Ac3H11_1691 0.24 -0.8
291,826 - Ac3H11_1691 0.24 -0.9
291,826 - Ac3H11_1691 0.24 -2.4
291,826 - Ac3H11_1691 0.24 +0.3
291,826 - Ac3H11_1691 0.24 -0.7
291,826 - Ac3H11_1691 0.24 +0.4
291,826 - Ac3H11_1691 0.24 -0.3
291,826 - Ac3H11_1691 0.24 -0.5
291,826 - Ac3H11_1691 0.24 -0.1
291,826 - Ac3H11_1691 0.24 +0.0
291,826 - Ac3H11_1691 0.24 +0.5
291,826 - Ac3H11_1691 0.24 -0.0
291,826 - Ac3H11_1691 0.24 -1.2
291,906 + Ac3H11_1691 0.46 +0.3
291,907 - Ac3H11_1691 0.46 -0.9

Or see this region's nucleotide sequence