Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS01045

Experiment: propionate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE51_RS01040 and ABIE51_RS01045 are separated by 164 nucleotidesABIE51_RS01045 and ABIE51_RS01050 overlap by 4 nucleotides ABIE51_RS01040: ABIE51_RS01040 - LysR family transcriptional regulator, at 221,839 to 222,924 _RS01040 ABIE51_RS01045: ABIE51_RS01045 - hypothetical protein, at 223,089 to 223,367 _RS01045 ABIE51_RS01050: ABIE51_RS01050 - SDR family oxidoreductase, at 223,364 to 224,398 _RS01050 Position (kb) 223 224Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 222.122 kb on + strand, within ABIE51_RS01040at 222.161 kb on + strand, within ABIE51_RS01040at 222.161 kb on + strand, within ABIE51_RS01040at 222.161 kb on + strand, within ABIE51_RS01040at 222.161 kb on + strand, within ABIE51_RS01040at 222.162 kb on - strand, within ABIE51_RS01040at 222.162 kb on - strand, within ABIE51_RS01040at 222.162 kb on - strand, within ABIE51_RS01040at 222.162 kb on - strand, within ABIE51_RS01040at 222.162 kb on - strand, within ABIE51_RS01040at 222.176 kb on + strand, within ABIE51_RS01040at 222.177 kb on - strand, within ABIE51_RS01040at 222.177 kb on - strand, within ABIE51_RS01040at 222.320 kb on + strand, within ABIE51_RS01040at 222.320 kb on + strand, within ABIE51_RS01040at 222.320 kb on + strand, within ABIE51_RS01040at 222.321 kb on - strand, within ABIE51_RS01040at 222.411 kb on - strand, within ABIE51_RS01040at 222.425 kb on + strand, within ABIE51_RS01040at 222.426 kb on - strand, within ABIE51_RS01040at 222.623 kb on + strand, within ABIE51_RS01040at 222.623 kb on + strand, within ABIE51_RS01040at 222.728 kb on + strand, within ABIE51_RS01040at 222.728 kb on + strand, within ABIE51_RS01040at 222.729 kb on - strand, within ABIE51_RS01040at 222.729 kb on - strand, within ABIE51_RS01040at 222.729 kb on - strand, within ABIE51_RS01040at 222.729 kb on - strand, within ABIE51_RS01040at 222.729 kb on - strand, within ABIE51_RS01040at 223.009 kb on + strandat 223.009 kb on + strandat 223.009 kb on + strandat 223.010 kb on - strandat 223.010 kb on - strandat 223.010 kb on - strandat 223.010 kb on - strandat 223.010 kb on - strandat 223.010 kb on - strandat 223.010 kb on - strandat 223.028 kb on + strandat 223.028 kb on + strandat 223.028 kb on + strandat 223.028 kb on + strandat 223.028 kb on + strandat 223.029 kb on - strandat 223.029 kb on - strandat 223.029 kb on - strandat 223.051 kb on + strandat 223.052 kb on - strandat 223.052 kb on - strandat 223.111 kb on - strandat 223.330 kb on + strand, within ABIE51_RS01045at 223.330 kb on + strand, within ABIE51_RS01045at 223.330 kb on + strand, within ABIE51_RS01045at 223.331 kb on - strand, within ABIE51_RS01045at 223.807 kb on + strand, within ABIE51_RS01050at 223.808 kb on - strand, within ABIE51_RS01050at 223.808 kb on - strand, within ABIE51_RS01050at 223.808 kb on - strand, within ABIE51_RS01050at 223.814 kb on - strand, within ABIE51_RS01050at 223.814 kb on - strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.817 kb on + strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.818 kb on - strand, within ABIE51_RS01050at 223.821 kb on + strand, within ABIE51_RS01050at 223.821 kb on + strand, within ABIE51_RS01050at 223.821 kb on + strand, within ABIE51_RS01050at 223.821 kb on + strand, within ABIE51_RS01050at 223.821 kb on + strand, within ABIE51_RS01050at 223.822 kb on - strand, within ABIE51_RS01050at 223.822 kb on - strand, within ABIE51_RS01050at 223.822 kb on - strand, within ABIE51_RS01050at 223.822 kb on - strand, within ABIE51_RS01050at 223.822 kb on - strand, within ABIE51_RS01050at 223.822 kb on - strand, within ABIE51_RS01050at 223.822 kb on - strand, within ABIE51_RS01050at 224.097 kb on - strand, within ABIE51_RS01050at 224.292 kb on + strand, within ABIE51_RS01050at 224.293 kb on - strand, within ABIE51_RS01050at 224.293 kb on - strand, within ABIE51_RS01050at 224.293 kb on - strand, within ABIE51_RS01050at 224.310 kb on + strandat 224.310 kb on + strandat 224.311 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction propionate (C)
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222,122 + ABIE51_RS01040 0.26 +0.5
222,161 + ABIE51_RS01040 0.30 +0.2
222,161 + ABIE51_RS01040 0.30 -0.3
222,161 + ABIE51_RS01040 0.30 -0.3
222,161 + ABIE51_RS01040 0.30 -1.3
222,162 - ABIE51_RS01040 0.30 -1.5
222,162 - ABIE51_RS01040 0.30 +0.2
222,162 - ABIE51_RS01040 0.30 -0.1
222,162 - ABIE51_RS01040 0.30 +0.4
222,162 - ABIE51_RS01040 0.30 -0.2
222,176 + ABIE51_RS01040 0.31 +1.5
222,177 - ABIE51_RS01040 0.31 -0.1
222,177 - ABIE51_RS01040 0.31 +0.1
222,320 + ABIE51_RS01040 0.44 +1.3
222,320 + ABIE51_RS01040 0.44 +1.0
222,320 + ABIE51_RS01040 0.44 +1.9
222,321 - ABIE51_RS01040 0.44 +0.4
222,411 - ABIE51_RS01040 0.53 +0.1
222,425 + ABIE51_RS01040 0.54 +0.7
222,426 - ABIE51_RS01040 0.54 -0.2
222,623 + ABIE51_RS01040 0.72 +0.0
222,623 + ABIE51_RS01040 0.72 +0.6
222,728 + ABIE51_RS01040 0.82 +1.5
222,728 + ABIE51_RS01040 0.82 +1.5
222,729 - ABIE51_RS01040 0.82 -0.4
222,729 - ABIE51_RS01040 0.82 -3.1
222,729 - ABIE51_RS01040 0.82 +0.5
222,729 - ABIE51_RS01040 0.82 -2.3
222,729 - ABIE51_RS01040 0.82 -0.8
223,009 + +1.4
223,009 + +1.5
223,009 + -0.1
223,010 - -0.7
223,010 - +0.7
223,010 - +1.1
223,010 - -0.6
223,010 - -0.8
223,010 - -2.1
223,010 - -0.1
223,028 + -0.1
223,028 + +1.1
223,028 + -1.1
223,028 + +1.5
223,028 + -0.2
223,029 - -0.1
223,029 - -1.5
223,029 - +0.4
223,051 + +0.5
223,052 - -0.2
223,052 - +0.0
223,111 - -0.2
223,330 + ABIE51_RS01045 0.86 +1.5
223,330 + ABIE51_RS01045 0.86 -0.4
223,330 + ABIE51_RS01045 0.86 +1.2
223,331 - ABIE51_RS01045 0.87 -0.3
223,807 + ABIE51_RS01050 0.43 +0.5
223,808 - ABIE51_RS01050 0.43 +0.5
223,808 - ABIE51_RS01050 0.43 +0.0
223,808 - ABIE51_RS01050 0.43 -0.1
223,814 - ABIE51_RS01050 0.43 -0.5
223,814 - ABIE51_RS01050 0.43 -0.5
223,817 + ABIE51_RS01050 0.44 -0.5
223,817 + ABIE51_RS01050 0.44 +1.5
223,817 + ABIE51_RS01050 0.44 +0.7
223,817 + ABIE51_RS01050 0.44 +1.7
223,817 + ABIE51_RS01050 0.44 +0.5
223,817 + ABIE51_RS01050 0.44 +1.5
223,817 + ABIE51_RS01050 0.44 +0.5
223,817 + ABIE51_RS01050 0.44 +1.2
223,817 + ABIE51_RS01050 0.44 +0.8
223,817 + ABIE51_RS01050 0.44 +0.4
223,817 + ABIE51_RS01050 0.44 +1.0
223,817 + ABIE51_RS01050 0.44 -0.5
223,817 + ABIE51_RS01050 0.44 -0.1
223,817 + ABIE51_RS01050 0.44 +1.9
223,818 - ABIE51_RS01050 0.44 -1.7
223,818 - ABIE51_RS01050 0.44 -1.0
223,818 - ABIE51_RS01050 0.44 +0.4
223,818 - ABIE51_RS01050 0.44 -1.6
223,818 - ABIE51_RS01050 0.44 +0.9
223,818 - ABIE51_RS01050 0.44 +0.2
223,818 - ABIE51_RS01050 0.44 -0.5
223,818 - ABIE51_RS01050 0.44 +1.1
223,818 - ABIE51_RS01050 0.44 -2.1
223,818 - ABIE51_RS01050 0.44 +0.9
223,818 - ABIE51_RS01050 0.44 -0.1
223,818 - ABIE51_RS01050 0.44 -0.0
223,818 - ABIE51_RS01050 0.44 -2.1
223,818 - ABIE51_RS01050 0.44 +0.6
223,821 + ABIE51_RS01050 0.44 -0.1
223,821 + ABIE51_RS01050 0.44 +0.7
223,821 + ABIE51_RS01050 0.44 -1.3
223,821 + ABIE51_RS01050 0.44 -0.1
223,821 + ABIE51_RS01050 0.44 -0.2
223,822 - ABIE51_RS01050 0.44 -0.8
223,822 - ABIE51_RS01050 0.44 -1.2
223,822 - ABIE51_RS01050 0.44 +0.4
223,822 - ABIE51_RS01050 0.44 -1.1
223,822 - ABIE51_RS01050 0.44 -0.2
223,822 - ABIE51_RS01050 0.44 +0.2
223,822 - ABIE51_RS01050 0.44 -2.9
224,097 - ABIE51_RS01050 0.71 -0.6
224,292 + ABIE51_RS01050 0.90 +1.3
224,293 - ABIE51_RS01050 0.90 +1.0
224,293 - ABIE51_RS01050 0.90 -0.4
224,293 - ABIE51_RS01050 0.90 +0.3
224,310 + +0.5
224,310 + +1.9
224,311 - -2.3

Or see this region's nucleotide sequence