Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3366

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT3365 and BT3366 are separated by 162 nucleotidesBT3366 and BT3367 are separated by 79 nucleotides BT3365: BT3365 - putative glycosyltransferase (NCBI ptt file), at 4,339,755 to 4,341,794 BT3365 BT3366: BT3366 - putative glycosyltransferase yibD (NCBI ptt file), at 4,341,957 to 4,342,967 BT3366 BT3367: BT3367 - putative glycosyltransferase (NCBI ptt file), at 4,343,047 to 4,344,210 BT3367 Position (kb) 4341 4342 4343Strain fitness (log2 ratio) -3 -2 -1 0 1at 4341.779 kb on + strandat 4341.779 kb on + strandat 4341.779 kb on + strandat 4341.799 kb on + strandat 4341.799 kb on + strandat 4341.823 kb on - strandat 4341.896 kb on + strandat 4341.908 kb on + strandat 4341.912 kb on + strandat 4343.706 kb on - strand, within BT3367

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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4,341,779 + -2.9
4,341,779 + -1.8
4,341,779 + -0.7
4,341,799 + -1.1
4,341,799 + -1.3
4,341,823 - -3.1
4,341,896 + -0.5
4,341,908 + -0.4
4,341,912 + -0.5
4,343,706 - BT3367 0.57 -0.4

Or see this region's nucleotide sequence