Experiment: Casamino Acids (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_00062 and CCNA_03913 are separated by 78 nucleotides CCNA_03913 and CCNA_00063 are separated by 41 nucleotides
CCNA_00062: CCNA_00062 - tryptophanyl-tRNA synthetase, at 63,327 to 64,361
_00062
CCNA_03913: CCNA_03913 - hypothetical protein, at 64,440 to 64,487
_03913
CCNA_00063: CCNA_00063 - MviN-family integral membrane protein, at 64,529 to 66,091
_00063
Position (kb) 64
65 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 64.363 kb on + strand at 64.384 kb on + strand at 64.450 kb on - strand, within CCNA_03913 at 64.500 kb on + strand at 64.502 kb on + strand at 64.502 kb on + strand at 64.502 kb on + strand at 64.510 kb on - strand at 64.510 kb on - strand at 64.510 kb on - strand at 64.510 kb on - strand at 64.512 kb on + strand at 64.520 kb on - strand at 64.520 kb on - strand at 64.520 kb on - strand at 64.525 kb on - strand at 64.525 kb on - strand at 64.530 kb on - strand at 64.557 kb on + strand at 64.560 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.565 kb on - strand at 64.581 kb on - strand at 64.581 kb on - strand at 64.581 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.613 kb on - strand at 64.649 kb on + strand at 64.649 kb on + strand at 64.657 kb on - strand at 64.670 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Casamino Acids (N) remove 64,363 + +0.9 64,384 + +0.5 64,450 - CCNA_03913 0.21 +0.7 64,500 + +0.9 64,502 + -0.7 64,502 + -0.1 64,502 + -1.1 64,510 - +0.7 64,510 - +1.1 64,510 - -0.3 64,510 - -0.3 64,512 + +0.0 64,520 - +0.3 64,520 - -0.2 64,520 - -0.1 64,525 - +0.3 64,525 - +0.6 64,530 - -0.3 64,557 + -2.0 64,560 - +0.7 64,565 - +0.8 64,565 - +0.6 64,565 - +0.9 64,565 - +0.7 64,565 - -0.6 64,565 - -0.1 64,565 - +0.4 64,581 - +1.4 64,581 - +0.3 64,581 - +0.6 64,613 - +0.6 64,613 - +0.1 64,613 - +0.5 64,613 - +1.7 64,613 - +0.3 64,613 - +0.0 64,613 - +0.4 64,613 - +0.3 64,613 - +0.3 64,613 - -1.4 64,613 - -0.3 64,613 - +0.6 64,613 - +1.4 64,649 + -0.5 64,649 + -3.0 64,657 - -1.0 64,670 - +0.1
Or see this region's nucleotide sequence