Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS25390

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
6,166,324	+		CA265_RS25375	0.29	+0.7
6,166,342	+		CA265_RS25375	0.32	+0.3
6,166,400	+		CA265_RS25375	0.41	+0.3
6,166,408	-		CA265_RS25375	0.42	+0.4
6,166,411	-		CA265_RS25375	0.42	+0.2
6,166,454	-		CA265_RS25375	0.49	+1.3
6,166,553	+		CA265_RS25375	0.63	-0.7
6,166,562	-		CA265_RS25375	0.65	+0.1
6,166,687	-		CA265_RS25375	0.83	-0.0
6,166,716	+		CA265_RS25375	0.88	-1.5
6,166,717	-		CA265_RS25375	0.88	+2.0
6,166,748	-				+0.1
6,166,748	-				+0.0
6,166,766	-				+0.2
6,167,036	+				+0.5
6,167,055	+		CA265_RS25385	0.12	-0.7
6,167,091	+		CA265_RS25385	0.25	+0.1
6,167,132	+		CA265_RS25385	0.40	+0.4
6,167,132	+		CA265_RS25385	0.40	-0.2
6,167,231	+		CA265_RS25385	0.75	+0.5
6,167,231	+		CA265_RS25385	0.75	-0.9
6,167,233	+		CA265_RS25385	0.76	-0.7
6,167,256	+		CA265_RS25385	0.84	+1.0
6,168,186	-				+1.5
6,168,188	-				-0.0
6,168,191	+				-0.2
6,168,220	+				+0.6
6,168,290	-		CA265_RS25395	0.16	+0.7
6,168,294	-		CA265_RS25395	0.17	-0.0
6,168,450	-		CA265_RS25395	0.46	+1.0
6,168,484	+		CA265_RS25395	0.52	+1.7
6,168,484	+		CA265_RS25395	0.52	-0.2
6,168,579	+		CA265_RS25395	0.70	+2.0
6,168,631	+		CA265_RS25395	0.79	-0.5
6,168,646	+		CA265_RS25395	0.82	-0.5
6,168,710	-				-0.2
6,168,717	-				+0.9
6,168,742	-				+0.1
6,168,786	-				+2.3
6,168,786	-				-0.6
6,168,787	+				+0.9
6,168,795	+				+1.6
6,168,795	+				-1.1
6,168,796	-				+1.1
6,168,818	-				-0.8
6,168,824	-				+1.0
6,168,861	-				-0.2
6,168,861	-				+1.2
6,168,894	+		CA265_RS25400	0.11	-0.1
6,169,081	+		CA265_RS25400	0.41	-0.5
6,169,132	-		CA265_RS25400	0.49	-0.8
6,169,153	-		CA265_RS25400	0.52	-0.2