Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS20150

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
4,980,448	+				-0.0
4,980,479	-				-0.5
4,980,550	+		CA265_RS20145	0.11	-1.3
4,980,550	+		CA265_RS20145	0.11	-0.1
4,980,554	+		CA265_RS20145	0.11	-0.9
4,980,571	-		CA265_RS20145	0.13	+1.5
4,980,606	+		CA265_RS20145	0.17	+1.1
4,980,637	-		CA265_RS20145	0.21	-0.6
4,980,655	+		CA265_RS20145	0.23	-0.2
4,980,697	-		CA265_RS20145	0.28	-1.6
4,980,726	+		CA265_RS20145	0.31	+0.0
4,980,764	+		CA265_RS20145	0.35	+0.1
4,980,764	+		CA265_RS20145	0.35	-0.5
4,980,776	-		CA265_RS20145	0.37	+0.9
4,980,810	+		CA265_RS20145	0.41	-0.9
4,980,829	+		CA265_RS20145	0.43	-1.1
4,980,829	+		CA265_RS20145	0.43	-0.6
4,980,864	-		CA265_RS20145	0.47	-0.1
4,980,913	-		CA265_RS20145	0.53	+0.5
4,980,942	+		CA265_RS20145	0.56	-0.0
4,980,960	-		CA265_RS20145	0.58	-0.1
4,980,960	-		CA265_RS20145	0.58	-0.4
4,981,164	+		CA265_RS20145	0.82	+1.5
4,981,164	+		CA265_RS20145	0.82	-0.5
4,981,200	-		CA265_RS20145	0.86	-0.1
4,981,268	+				-0.5
4,981,311	-				+0.1
4,981,311	-				+0.0
4,981,400	-				+0.5
4,981,418	+				-0.6
4,981,461	+				+0.0
4,981,493	-		CA265_RS20150	0.14	+1.0
4,981,494	+		CA265_RS20150	0.14	-1.0
4,981,576	-		CA265_RS20150	0.33	-0.6
4,981,580	+		CA265_RS20150	0.34	-1.4
4,981,626	+		CA265_RS20150	0.45	-0.7
4,981,627	-		CA265_RS20150	0.45	-0.8
4,981,729	-		CA265_RS20150	0.69	-0.2
4,981,797	+		CA265_RS20150	0.84	-0.8
4,981,836	-				+0.2
4,981,847	-				+0.4
4,981,848	+				-2.0
4,981,849	-				-1.0
4,981,849	-				-0.2
4,981,863	-				+0.3
4,981,924	-				+0.5
4,981,937	-				+0.0
4,981,948	-				+0.5
4,981,948	-				+3.6
4,981,963	-				+0.0
4,981,963	-				-0.5
4,981,964	+				-0.2
4,981,965	-				-0.1
4,982,001	-				-1.5
4,982,001	-				-1.3
4,982,005	+				-1.0
4,982,061	+				+1.0
4,982,062	-				-0.0
4,982,234	+				+0.1
4,982,235	-				+0.0
4,982,247	+				+0.1
4,982,273	+				+0.7
4,982,274	-				-0.5
4,982,516	+		CA265_RS20155	0.12	-0.4
4,982,556	+		CA265_RS20155	0.15	+0.2
4,982,556	+		CA265_RS20155	0.15	-0.1
4,982,632	-		CA265_RS20155	0.21	+0.2
4,982,644	+		CA265_RS20155	0.22	-0.5
4,982,675	-		CA265_RS20155	0.24	+0.1
4,982,686	+		CA265_RS20155	0.25	+0.3
4,982,740	-		CA265_RS20155	0.29	-0.5
4,982,740	-		CA265_RS20155	0.29	-2.2
4,982,740	-		CA265_RS20155	0.29	+0.0
4,982,838	+		CA265_RS20155	0.37	+0.3
4,982,838	+		CA265_RS20155	0.37	-0.9