Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10645

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
2,631,824	+		CA265_RS10640	0.54	-0.7
2,631,825	-		CA265_RS10640	0.54	-0.3
2,631,828	+		CA265_RS10640	0.54	-0.4
2,631,901	-		CA265_RS10640	0.59	-0.3
2,631,928	-		CA265_RS10640	0.60	-0.4
2,631,946	+		CA265_RS10640	0.62	+0.9
2,631,946	+		CA265_RS10640	0.62	-0.4
2,631,946	+		CA265_RS10640	0.62	-0.4
2,631,947	-		CA265_RS10640	0.62	-0.7
2,632,015	+		CA265_RS10640	0.66	-0.1
2,632,119	-		CA265_RS10640	0.72	-0.8
2,632,150	+		CA265_RS10640	0.74	-0.1
2,632,151	-		CA265_RS10640	0.74	-0.1
2,632,164	-		CA265_RS10640	0.75	+0.2
2,632,164	-		CA265_RS10640	0.75	+0.3
2,632,167	+		CA265_RS10640	0.75	+0.3
2,632,287	-		CA265_RS10640	0.83	-0.0
2,632,302	+		CA265_RS10640	0.83	+0.2
2,632,306	+		CA265_RS10640	0.84	+0.3
2,632,307	-		CA265_RS10640	0.84	+0.2
2,632,307	-		CA265_RS10640	0.84	-0.3
2,632,312	-		CA265_RS10640	0.84	-0.0
2,632,312	-		CA265_RS10640	0.84	-1.4
2,632,314	-		CA265_RS10640	0.84	-0.5
2,632,413	+				+0.6
2,632,413	+				-0.2
2,632,492	+				+0.0
2,632,539	+				+0.3
2,632,539	+				-0.0
2,632,540	-				-1.5
2,632,683	-				+1.0
2,632,694	-				+0.4
2,632,743	-				-0.0
2,632,807	-				-0.8
2,632,817	+				+0.9
2,632,853	-				+0.2
2,632,973	+		CA265_RS10645	0.41	-0.6
2,632,983	+		CA265_RS10645	0.43	-0.3
2,633,055	+		CA265_RS10645	0.60	-0.6
2,633,113	-		CA265_RS10645	0.72	-2.4
2,633,207	+				-0.9
2,633,252	-				+1.3
2,633,264	+				+1.0
2,633,265	-				-0.4
2,633,318	-		CA265_RS10650	0.17	+0.1
2,633,320	+		CA265_RS10650	0.18	+0.6
2,633,363	+		CA265_RS10650	0.27	-0.2
2,633,363	+		CA265_RS10650	0.27	+0.4
2,633,364	-		CA265_RS10650	0.28	+0.1
2,633,368	+		CA265_RS10650	0.28	-0.2
2,633,380	+		CA265_RS10650	0.31	-0.1
2,633,381	-		CA265_RS10650	0.31	+0.2
2,633,381	-		CA265_RS10650	0.31	+0.0
2,633,412	-		CA265_RS10650	0.38	+0.1
2,633,493	+		CA265_RS10650	0.56	-0.3
2,633,495	+		CA265_RS10650	0.57	-0.2
2,633,553	-		CA265_RS10650	0.70	-2.3
2,633,554	+		CA265_RS10650	0.70	+0.0
2,633,555	-		CA265_RS10650	0.70	-2.0
2,633,609	+		CA265_RS10650	0.82	-0.3
2,633,617	-		CA265_RS10650	0.84	+0.1
2,633,716	-				+0.8
2,633,758	+		CA265_RS10655	0.10	-0.4
2,633,767	+		CA265_RS10655	0.12	-0.9
2,633,832	+		CA265_RS10655	0.22	+0.2
2,633,917	-		CA265_RS10655	0.36	+0.0
2,633,932	-		CA265_RS10655	0.38	-0.0
2,633,933	+		CA265_RS10655	0.38	+0.2
2,634,054	+		CA265_RS10655	0.57	-0.6
2,634,086	+		CA265_RS10655	0.63	+0.4
2,634,109	+		CA265_RS10655	0.66	-0.0
2,634,109	+		CA265_RS10655	0.66	+0.3
2,634,110	-		CA265_RS10655	0.66	-0.1
2,634,110	-		CA265_RS10655	0.66	-1.0
2,634,110	-		CA265_RS10655	0.66	+0.3
2,634,110	-		CA265_RS10655	0.66	-0.1
2,634,197	-		CA265_RS10655	0.80	-0.1