Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS08080

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
2,008,036	+				+0.2
2,008,079	-				-0.1
2,008,127	+		CA265_RS08075	0.11	-0.2
2,008,206	+		CA265_RS08075	0.19	-0.2
2,008,218	+		CA265_RS08075	0.20	+0.2
2,008,237	+		CA265_RS08075	0.22	-0.2
2,008,240	-		CA265_RS08075	0.22	-0.1
2,008,277	-		CA265_RS08075	0.26	+0.8
2,008,322	-		CA265_RS08075	0.30	+0.6
2,008,365	+		CA265_RS08075	0.35	+0.0
2,008,366	-		CA265_RS08075	0.35	-1.0
2,008,379	+		CA265_RS08075	0.36	+0.6
2,008,380	-		CA265_RS08075	0.36	-0.5
2,008,521	-		CA265_RS08075	0.50	-0.5
2,008,535	+		CA265_RS08075	0.52	-0.1
2,008,787	+		CA265_RS08075	0.77	-0.5
2,008,901	+		CA265_RS08075	0.89	-0.2
2,008,902	-		CA265_RS08075	0.89	-0.4
2,008,902	-		CA265_RS08075	0.89	-0.4
2,008,908	+		CA265_RS08075	0.89	-0.2
2,008,967	-				+0.1
2,008,971	+				+0.0
2,008,978	+				+0.4
2,008,979	-				-0.6
2,008,989	-				+0.2
2,009,001	-				-0.4
2,009,118	+		CA265_RS08080	0.24	+0.0
2,009,145	-		CA265_RS08080	0.31	-0.3
2,009,154	-		CA265_RS08080	0.33	+0.1
2,009,235	+		CA265_RS08080	0.53	-0.2
2,009,241	+		CA265_RS08080	0.54	+0.7
2,009,294	+		CA265_RS08080	0.67	-0.7
2,009,294	+		CA265_RS08080	0.67	-0.2
2,009,343	-		CA265_RS08080	0.79	-0.2
2,009,364	-		CA265_RS08080	0.84	+0.2
2,009,364	-		CA265_RS08080	0.84	-0.1
2,009,364	-		CA265_RS08080	0.84	-0.1
2,009,368	-		CA265_RS08080	0.85	+0.2
2,009,368	-		CA265_RS08080	0.85	-0.7
2,009,368	-		CA265_RS08080	0.85	-0.3
2,009,368	-		CA265_RS08080	0.85	+0.2
2,009,413	-				+0.0
2,009,422	-				-0.4
2,009,429	-				+1.1
2,009,433	-				-0.1
2,009,436	+				-0.5
2,009,545	+		CA265_RS08085	0.11	-0.5
2,009,549	+		CA265_RS08085	0.12	-2.1
2,009,550	-		CA265_RS08085	0.12	+0.1
2,009,552	-		CA265_RS08085	0.12	+0.1
2,009,595	-		CA265_RS08085	0.16	-1.7
2,009,636	+		CA265_RS08085	0.20	+0.2
2,009,636	+		CA265_RS08085	0.20	+0.2
2,009,636	+		CA265_RS08085	0.20	-0.1
2,009,637	-		CA265_RS08085	0.20	+1.1
2,009,637	-		CA265_RS08085	0.20	-1.2
2,009,638	+		CA265_RS08085	0.20	+0.1
2,009,648	-		CA265_RS08085	0.21	-1.1
2,009,648	-		CA265_RS08085	0.21	-1.0
2,009,659	-		CA265_RS08085	0.22	+1.1
2,009,733	+		CA265_RS08085	0.29	-0.0
2,009,775	+		CA265_RS08085	0.33	-0.4
2,009,836	-		CA265_RS08085	0.39	-1.1
2,009,836	-		CA265_RS08085	0.39	+0.1
2,009,836	-		CA265_RS08085	0.39	-0.2
2,009,841	+		CA265_RS08085	0.39	+0.2
2,009,857	-		CA265_RS08085	0.41	-1.3
2,009,898	-		CA265_RS08085	0.45	+0.4
2,009,903	-		CA265_RS08085	0.45	-0.9
2,009,903	-		CA265_RS08085	0.45	+0.0
2,009,999	+		CA265_RS08085	0.54	-2.2
2,010,156	+		CA265_RS08085	0.69	-0.2
2,010,161	+		CA265_RS08085	0.70	-1.1
2,010,166	-		CA265_RS08085	0.70	-1.1
2,010,334	-		CA265_RS08085	0.86	+0.1