Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS04910

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
1,168,482	-		CA265_RS04905	0.16	-0.6
1,168,492	-		CA265_RS04905	0.17	-0.5
1,168,624	+		CA265_RS04905	0.30	-0.3
1,168,689	+		CA265_RS04905	0.36	-1.2
1,168,901	-		CA265_RS04905	0.56	-0.5
1,168,916	+		CA265_RS04905	0.57	+0.5
1,168,917	-		CA265_RS04905	0.57	-0.0
1,169,012	+		CA265_RS04905	0.66	-0.0
1,169,013	-		CA265_RS04905	0.66	+0.2
1,169,016	-		CA265_RS04905	0.66	-0.5
1,169,190	+				+1.9
1,169,190	+		CA265_RS04905	0.83	-0.1
1,169,191	-		CA265_RS04905	0.83	+0.8
1,169,260	+		CA265_RS04905	0.89	-0.5
1,169,283	+				-0.0
1,169,284	-				-0.1
1,169,339	-				-0.4
1,169,440	+				+0.3
1,169,441	-				-0.3
1,169,512	+				-0.8
1,169,535	+				+0.1
1,169,535	+				-0.8
1,169,694	-		CA265_RS04910	0.18	+1.7
1,169,701	+		CA265_RS04910	0.18	-0.2
1,169,702	-		CA265_RS04910	0.18	-0.7
1,169,801	-		CA265_RS04910	0.24	-0.5
1,169,830	-		CA265_RS04910	0.26	-0.7
1,169,858	+		CA265_RS04910	0.27	+0.5
1,169,871	-		CA265_RS04910	0.28	+0.5
1,170,061	+		CA265_RS04910	0.39	+0.0
1,170,062	-		CA265_RS04910	0.39	-0.0
1,170,064	+		CA265_RS04910	0.39	-0.5
1,170,111	+		CA265_RS04910	0.42	+0.2
1,170,112	-		CA265_RS04910	0.42	+0.7
1,170,147	-		CA265_RS04910	0.44	-0.3
1,170,158	+		CA265_RS04910	0.45	-0.4
1,170,166	+		CA265_RS04910	0.46	-0.3
1,170,167	-		CA265_RS04910	0.46	+0.1
1,170,214	-		CA265_RS04910	0.48	-1.0
1,170,217	+		CA265_RS04910	0.49	-0.5
1,170,217	+		CA265_RS04910	0.49	-0.4
1,170,218	-		CA265_RS04910	0.49	-0.4
1,170,218	-		CA265_RS04910	0.49	+0.8
1,170,220	-		CA265_RS04910	0.49	-1.2
1,170,220	-		CA265_RS04910	0.49	+0.0
1,170,298	+		CA265_RS04910	0.53	+0.2
1,170,299	-		CA265_RS04910	0.53	+0.8
1,170,473	-		CA265_RS04910	0.64	-1.0
1,170,473	-		CA265_RS04910	0.64	+0.7
1,170,473	-		CA265_RS04910	0.64	+0.2
1,170,550	-		CA265_RS04910	0.68	+0.9
1,170,576	+		CA265_RS04910	0.70	+0.1
1,170,596	-		CA265_RS04910	0.71	-0.1
1,170,596	-		CA265_RS04910	0.71	-0.4
1,170,719	-		CA265_RS04910	0.78	-0.6
1,170,842	+		CA265_RS04910	0.85	+0.2
1,170,843	-		CA265_RS04910	0.86	-0.9
1,170,849	+		CA265_RS04910	0.86	-0.3
1,170,887	+		CA265_RS04910	0.88	+0.4
1,170,891	+		CA265_RS04910	0.88	-0.3
1,170,891	+		CA265_RS04910	0.88	-0.0
1,170,891	+		CA265_RS04910	0.88	+1.9
1,170,891	+		CA265_RS04910	0.88	-0.2
1,170,891	+		CA265_RS04910	0.88	-0.4
1,170,892	-		CA265_RS04910	0.88	-0.9
1,170,892	-		CA265_RS04910	0.88	-0.3
1,170,892	-		CA265_RS04910	0.88	-0.7
1,170,892	-				-1.0
1,170,893	+		CA265_RS04910	0.88	+0.2
1,170,893	+		CA265_RS04910	0.88	+0.2
1,170,894	-		CA265_RS04910	0.89	+0.4
1,170,925	+				-1.1
1,170,948	-				-0.8
1,171,115	-				+0.2
1,171,161	+				-0.3
1,171,292	-				+0.6
1,171,292	-				-1.4
1,171,375	+		CA265_RS04915	0.12	-0.9
1,171,419	+		CA265_RS04915	0.14	-0.5
1,171,420	-		CA265_RS04915	0.14	-0.1
1,171,420	-		CA265_RS04915	0.14	-0.1
1,171,458	+		CA265_RS04915	0.15	+0.2
1,171,458	+		CA265_RS04915	0.15	+0.4
1,171,463	-		CA265_RS04915	0.16	-0.3
1,171,463	-		CA265_RS04915	0.16	+1.5
1,171,469	+		CA265_RS04915	0.16	-1.6
1,171,509	-		CA265_RS04915	0.18	-1.0
1,171,517	-		CA265_RS04915	0.18	-0.6
1,171,690	+		CA265_RS04915	0.25	-0.0
1,171,772	+		CA265_RS04915	0.29	-2.7
1,171,772	+		CA265_RS04915	0.29	-0.1
1,171,827	+		CA265_RS04915	0.31	+0.1
1,171,851	+		CA265_RS04915	0.32	-0.3
1,171,948	+		CA265_RS04915	0.36	-0.2