Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS00665

Experiment: R2A with Chloramphenicol 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.001 mg/ml
150,763	+		CA265_RS00660	0.66	+0.1
150,801	+		CA265_RS00660	0.67	-0.7
150,802	-		CA265_RS00660	0.67	+0.2
150,905	+		CA265_RS00660	0.71	+0.3
150,906	-		CA265_RS00660	0.71	-2.1
150,927	-		CA265_RS00660	0.71	+0.5
150,946	-		CA265_RS00660	0.72	-0.1
151,001	+		CA265_RS00660	0.74	-0.5
151,002	-		CA265_RS00660	0.74	+0.6
151,044	+		CA265_RS00660	0.76	-1.0
151,095	+		CA265_RS00660	0.77	+0.3
151,095	+		CA265_RS00660	0.77	+0.2
151,096	-		CA265_RS00660	0.77	-0.2
151,229	+		CA265_RS00660	0.82	+1.2
151,246	-		CA265_RS00660	0.83	-0.3
151,321	-		CA265_RS00660	0.85	-0.2
151,338	+		CA265_RS00660	0.86	-0.1
151,339	-		CA265_RS00660	0.86	-0.7
151,372	+		CA265_RS00660	0.87	-0.1
151,376	-		CA265_RS00660	0.87	+0.1
151,376	-		CA265_RS00660	0.87	+0.1
151,376	-		CA265_RS00660	0.87	-0.2
151,435	+		CA265_RS00660	0.90	-1.3
151,457	-				-0.0
151,523	-				+0.0
151,523	-				+0.5
151,523	-				+0.5
151,523	-				+0.7
151,567	+				-0.6
151,568	-				-0.2
151,568	-				-0.1
151,666	-				-0.2
151,787	-				-0.8
151,804	-		CA265_RS00665	0.10	-0.1
151,834	-		CA265_RS00665	0.15	-0.6
151,859	-		CA265_RS00665	0.19	-0.5
151,859	-		CA265_RS00665	0.19	-0.9
152,080	-		CA265_RS00665	0.52	+0.6
152,164	+		CA265_RS00665	0.65	-0.2
152,279	-		CA265_RS00665	0.83	-0.7
152,388	-				-0.2
152,390	-				-0.2
152,390	-				-0.2
152,394	+				-0.6
152,460	+				-1.1
152,460	+				-1.4
152,522	+				+0.0
152,578	+				-0.3
152,578	+				+0.0
152,690	-				+0.1
152,744	-				+1.6
152,788	-				-0.8
152,788	-				-0.3
152,791	+				-0.9
152,813	+				-0.2
152,813	+				+0.1
152,814	-				-0.8
152,831	+				+0.5
152,852	+				-1.2
152,865	+				-0.1
152,875	-				+1.6
152,885	+				-1.0
152,885	+				-0.6
152,932	+				-0.7
152,932	+				-1.6
152,933	-				-0.5
152,942	+				+0.1
153,008	+		CA265_RS00670	0.14	-0.3
153,063	+		CA265_RS00670	0.21	+0.3
153,066	-		CA265_RS00670	0.21	-0.2
153,084	-		CA265_RS00670	0.23	-1.9
153,140	+		CA265_RS00670	0.30	-0.4
153,172	+		CA265_RS00670	0.34	-1.0
153,173	-		CA265_RS00670	0.34	+0.2
153,173	-		CA265_RS00670	0.34	-0.1
153,198	+		CA265_RS00670	0.37	-0.3
153,209	+		CA265_RS00670	0.38	+0.6
153,316	+		CA265_RS00670	0.51	+0.3