Strain Fitness in Acidovorax sp. GW101-3H11 around Ac3H11_4529

Experiment: D,L-Lactate (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntAc3H11_4528 and Ac3H11_4529 are separated by 149 nucleotidesAc3H11_4529 and Ac3H11_4530 are separated by 64 nucleotides Ac3H11_4528 - Wax ester synthase/acyl-CoA:diacylglycerol acyltransferase, at 123,220 to 124,854 _4528 Ac3H11_4529 - Acyl-CoA-binding protein, at 125,004 to 125,258 _4529 Ac3H11_4530 - Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4), at 125,323 to 126,243 _4530 Position (kb) 125 126Strain fitness (log2 ratio) -2 -1 0 1at 124.459 kb on - strand, within Ac3H11_4528at 124.459 kb on - strand, within Ac3H11_4528at 124.861 kb on + strandat 124.861 kb on + strandat 124.861 kb on + strandat 124.861 kb on + strandat 124.861 kb on + strandat 124.861 kb on + strandat 124.861 kb on + strandat 124.861 kb on + strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.862 kb on - strandat 124.867 kb on + strandat 124.867 kb on + strandat 124.867 kb on + strandat 124.867 kb on + strandat 124.867 kb on + strandat 124.867 kb on + strandat 124.867 kb on + strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.868 kb on - strandat 124.935 kb on + strandat 124.935 kb on + strandat 124.935 kb on + strandat 124.935 kb on + strandat 124.935 kb on + strandat 124.935 kb on + strandat 124.935 kb on + strandat 124.935 kb on + strandat 124.936 kb on - strandat 124.936 kb on - strandat 124.936 kb on - strandat 124.936 kb on - strandat 124.936 kb on - strandat 124.936 kb on - strandat 125.094 kb on + strand, within Ac3H11_4529at 125.094 kb on + strand, within Ac3H11_4529at 125.094 kb on + strand, within Ac3H11_4529at 125.094 kb on + strand, within Ac3H11_4529at 125.095 kb on - strand, within Ac3H11_4529at 125.095 kb on - strand, within Ac3H11_4529at 125.095 kb on - strand, within Ac3H11_4529at 125.103 kb on + strand, within Ac3H11_4529at 125.104 kb on - strand, within Ac3H11_4529at 125.104 kb on - strand, within Ac3H11_4529at 125.104 kb on - strand, within Ac3H11_4529at 125.229 kb on + strand, within Ac3H11_4529at 125.229 kb on + strand, within Ac3H11_4529at 125.229 kb on + strand, within Ac3H11_4529at 125.229 kb on + strand, within Ac3H11_4529at 125.229 kb on + strand, within Ac3H11_4529at 125.229 kb on + strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.230 kb on - strand, within Ac3H11_4529at 125.260 kb on - strandat 125.324 kb on + strandat 125.324 kb on + strandat 125.372 kb on + strandat 125.448 kb on + strand, within Ac3H11_4530at 125.449 kb on - strand, within Ac3H11_4530at 125.449 kb on - strand, within Ac3H11_4530at 125.449 kb on - strand, within Ac3H11_4530at 125.516 kb on + strand, within Ac3H11_4530at 125.516 kb on + strand, within Ac3H11_4530at 125.517 kb on - strand, within Ac3H11_4530at 125.574 kb on - strand, within Ac3H11_4530at 125.574 kb on - strand, within Ac3H11_4530at 126.016 kb on + strand, within Ac3H11_4530at 126.016 kb on + strand, within Ac3H11_4530at 126.016 kb on + strand, within Ac3H11_4530at 126.016 kb on + strand, within Ac3H11_4530

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
remove
124,459 - Ac3H11_4528 0.76 +0.1
124,459 - Ac3H11_4528 0.76 +0.1
124,861 + +0.4
124,861 + -0.3
124,861 + +0.6
124,861 + -1.1
124,861 + -0.2
124,861 + +0.7
124,861 + -0.2
124,861 + +0.1
124,862 - -1.5
124,862 - +0.8
124,862 - -1.0
124,862 - -0.2
124,862 - +0.1
124,862 - +0.6
124,862 - +0.4
124,862 - -0.9
124,862 - -0.2
124,862 - -0.5
124,862 - +0.8
124,862 - +0.2
124,862 - -0.1
124,862 - +0.4
124,862 - +0.1
124,862 - +0.1
124,862 - -0.2
124,862 - -0.6
124,862 - -1.2
124,867 + -0.4
124,867 + +0.4
124,867 + +0.2
124,867 + -0.6
124,867 + -0.6
124,867 + -2.2
124,867 + +0.0
124,868 - +0.3
124,868 - -0.5
124,868 - +0.7
124,868 - +0.8
124,868 - +0.0
124,868 - +0.6
124,868 - +1.1
124,868 - -0.9
124,868 - -0.5
124,868 - -0.5
124,935 + +0.1
124,935 + +1.5
124,935 + -0.5
124,935 + +0.2
124,935 + +0.6
124,935 + -0.5
124,935 + -0.4
124,935 + -0.3
124,936 - +0.3
124,936 - +0.1
124,936 - -0.9
124,936 - -1.3
124,936 - -1.1
124,936 - +0.5
125,094 + Ac3H11_4529 0.35 -1.4
125,094 + Ac3H11_4529 0.35 +0.8
125,094 + Ac3H11_4529 0.35 +0.8
125,094 + Ac3H11_4529 0.35 -0.4
125,095 - Ac3H11_4529 0.36 -0.3
125,095 - Ac3H11_4529 0.36 +0.9
125,095 - Ac3H11_4529 0.36 -0.0
125,103 + Ac3H11_4529 0.39 +0.7
125,104 - Ac3H11_4529 0.39 +0.3
125,104 - Ac3H11_4529 0.39 -1.3
125,104 - Ac3H11_4529 0.39 -0.2
125,229 + Ac3H11_4529 0.88 +0.3
125,229 + Ac3H11_4529 0.88 +1.1
125,229 + Ac3H11_4529 0.88 -0.0
125,229 + Ac3H11_4529 0.88 -0.5
125,229 + Ac3H11_4529 0.88 +0.0
125,229 + Ac3H11_4529 0.88 +0.7
125,230 - Ac3H11_4529 0.89 -2.2
125,230 - Ac3H11_4529 0.89 +0.6
125,230 - Ac3H11_4529 0.89 +0.1
125,230 - Ac3H11_4529 0.89 -0.0
125,230 - Ac3H11_4529 0.89 -1.1
125,230 - Ac3H11_4529 0.89 +0.9
125,230 - Ac3H11_4529 0.89 -0.3
125,230 - Ac3H11_4529 0.89 -0.2
125,230 - Ac3H11_4529 0.89 +0.0
125,230 - Ac3H11_4529 0.89 +0.1
125,260 - +0.9
125,324 + +0.6
125,324 + +0.4
125,372 + +0.5
125,448 + Ac3H11_4530 0.14 -1.6
125,449 - Ac3H11_4530 0.14 +0.7
125,449 - Ac3H11_4530 0.14 -0.0
125,449 - Ac3H11_4530 0.14 +0.2
125,516 + Ac3H11_4530 0.21 -0.6
125,516 + Ac3H11_4530 0.21 +0.3
125,517 - Ac3H11_4530 0.21 +0.5
125,574 - Ac3H11_4530 0.27 +0.1
125,574 - Ac3H11_4530 0.27 -0.0
126,016 + Ac3H11_4530 0.75 -0.7
126,016 + Ac3H11_4530 0.75 +0.4
126,016 + Ac3H11_4530 0.75 +0.2
126,016 + Ac3H11_4530 0.75 -0.2

Or see this region's nucleotide sequence