Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3369 and Ac3H11_3370 are separated by 136 nucleotides Ac3H11_3370 and Ac3H11_3371 are separated by 49 nucleotides Ac3H11_3371 and Ac3H11_3372 are separated by 89 nucleotides Ac3H11_3372 and Ac3H11_3373 are separated by 54 nucleotides
Ac3H11_3369 - Branched-chain amino acid aminotransferase (EC 2.6.1.42), at 52,167 to 53,084
_3369
Ac3H11_3370 - FIG00933367: hypothetical protein, at 53,221 to 53,640
_3370
Ac3H11_3371 - DNA repair protein RadA, at 53,690 to 55,150
_3371
Ac3H11_3372 - 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.n4), at 55,240 to 56,073
_3372
Ac3H11_3373 - 2-dehydropantoate 2-reductase (EC 1.1.1.169), at 56,128 to 57,105
_3373
Position (kb) 53
54
55
56 Strain fitness (log2 ratio) -2
-1
0
1
2 at 53.339 kb on + strand, within Ac3H11_3370 at 53.339 kb on + strand, within Ac3H11_3370 at 53.340 kb on - strand, within Ac3H11_3370 at 53.340 kb on - strand, within Ac3H11_3370 at 53.462 kb on + strand, within Ac3H11_3370 at 53.462 kb on + strand, within Ac3H11_3370 at 53.463 kb on - strand, within Ac3H11_3370 at 53.463 kb on - strand, within Ac3H11_3370 at 53.463 kb on - strand, within Ac3H11_3370 at 53.463 kb on - strand, within Ac3H11_3370 at 53.463 kb on - strand, within Ac3H11_3370 at 53.580 kb on + strand, within Ac3H11_3370 at 53.581 kb on - strand, within Ac3H11_3370 at 53.625 kb on + strand at 53.625 kb on + strand at 53.626 kb on - strand at 53.640 kb on + strand at 53.640 kb on + strand at 53.640 kb on + strand at 53.641 kb on - strand at 53.656 kb on + strand at 53.657 kb on - strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.691 kb on + strand at 53.692 kb on - strand at 53.692 kb on - strand at 53.692 kb on - strand at 53.692 kb on - strand at 53.692 kb on - strand at 53.692 kb on - strand at 53.692 kb on - strand at 53.692 kb on - strand at 53.692 kb on - strand at 53.929 kb on + strand, within Ac3H11_3371 at 53.929 kb on + strand, within Ac3H11_3371 at 53.929 kb on + strand, within Ac3H11_3371 at 54.345 kb on + strand, within Ac3H11_3371 at 54.345 kb on + strand, within Ac3H11_3371 at 54.345 kb on + strand, within Ac3H11_3371 at 54.346 kb on - strand, within Ac3H11_3371 at 54.346 kb on - strand, within Ac3H11_3371 at 54.522 kb on + strand, within Ac3H11_3371 at 54.522 kb on + strand, within Ac3H11_3371 at 54.522 kb on + strand, within Ac3H11_3371 at 54.522 kb on + strand, within Ac3H11_3371 at 54.523 kb on - strand, within Ac3H11_3371 at 54.523 kb on - strand, within Ac3H11_3371 at 54.690 kb on + strand, within Ac3H11_3371 at 54.690 kb on + strand, within Ac3H11_3371 at 54.691 kb on - strand, within Ac3H11_3371 at 54.691 kb on - strand, within Ac3H11_3371 at 54.691 kb on - strand, within Ac3H11_3371 at 54.912 kb on + strand, within Ac3H11_3371 at 55.111 kb on + strand at 55.111 kb on + strand at 55.111 kb on + strand at 55.113 kb on + strand at 55.113 kb on + strand at 55.114 kb on - strand at 55.153 kb on + strand at 55.154 kb on - strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.164 kb on + strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.165 kb on - strand at 55.166 kb on + strand at 55.166 kb on + strand at 55.166 kb on + strand at 55.166 kb on + strand at 55.166 kb on + strand at 55.167 kb on - strand at 55.167 kb on - strand at 55.167 kb on - strand at 55.167 kb on - strand at 55.188 kb on + strand at 55.324 kb on + strand, within Ac3H11_3372 at 55.324 kb on + strand, within Ac3H11_3372 at 55.324 kb on + strand, within Ac3H11_3372 at 55.325 kb on - strand at 55.355 kb on - strand, within Ac3H11_3372 at 55.519 kb on + strand, within Ac3H11_3372 at 55.519 kb on + strand, within Ac3H11_3372 at 55.604 kb on - strand, within Ac3H11_3372 at 55.675 kb on + strand, within Ac3H11_3372 at 55.675 kb on + strand, within Ac3H11_3372 at 55.675 kb on + strand, within Ac3H11_3372 at 56.068 kb on + strand at 56.069 kb on - strand at 56.071 kb on + strand at 56.071 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.102 kb on + strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.103 kb on - strand at 56.139 kb on + strand at 56.139 kb on + strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.140 kb on - strand at 56.144 kb on - strand at 56.144 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 53,339 + Ac3H11_3370 0.28 -0.6 53,339 + Ac3H11_3370 0.28 +0.2 53,340 - Ac3H11_3370 0.28 -0.8 53,340 - Ac3H11_3370 0.28 +0.2 53,462 + Ac3H11_3370 0.57 +0.4 53,462 + Ac3H11_3370 0.57 +0.5 53,463 - Ac3H11_3370 0.58 +0.5 53,463 - Ac3H11_3370 0.58 +0.2 53,463 - Ac3H11_3370 0.58 +1.2 53,463 - Ac3H11_3370 0.58 +1.0 53,463 - Ac3H11_3370 0.58 +0.5 53,580 + Ac3H11_3370 0.85 -0.5 53,581 - Ac3H11_3370 0.86 +0.8 53,625 + +0.8 53,625 + +0.5 53,626 - -0.1 53,640 + +0.4 53,640 + -0.4 53,640 + +0.6 53,641 - -1.3 53,656 + -0.9 53,657 - -0.4 53,691 + -0.9 53,691 + +0.4 53,691 + -0.2 53,691 + +0.6 53,691 + -0.4 53,691 + +0.8 53,691 + -1.2 53,691 + -0.6 53,691 + +0.3 53,691 + -0.7 53,691 + +1.2 53,692 - -0.8 53,692 - +0.3 53,692 - +0.4 53,692 - -0.1 53,692 - +0.2 53,692 - +0.1 53,692 - +0.0 53,692 - +0.2 53,692 - +0.4 53,929 + Ac3H11_3371 0.16 -2.4 53,929 + Ac3H11_3371 0.16 -0.1 53,929 + Ac3H11_3371 0.16 -1.4 54,345 + Ac3H11_3371 0.45 -0.4 54,345 + Ac3H11_3371 0.45 -0.4 54,345 + Ac3H11_3371 0.45 -0.4 54,346 - Ac3H11_3371 0.45 -0.9 54,346 - Ac3H11_3371 0.45 +0.1 54,522 + Ac3H11_3371 0.57 -0.5 54,522 + Ac3H11_3371 0.57 +0.5 54,522 + Ac3H11_3371 0.57 +0.1 54,522 + Ac3H11_3371 0.57 -0.0 54,523 - Ac3H11_3371 0.57 -0.3 54,523 - Ac3H11_3371 0.57 +1.0 54,690 + Ac3H11_3371 0.68 +0.9 54,690 + Ac3H11_3371 0.68 -1.1 54,691 - Ac3H11_3371 0.69 -0.9 54,691 - Ac3H11_3371 0.69 -0.4 54,691 - Ac3H11_3371 0.69 +0.1 54,912 + Ac3H11_3371 0.84 -0.3 55,111 + -1.4 55,111 + +0.1 55,111 + -0.3 55,113 + -0.2 55,113 + -0.7 55,114 - -1.0 55,153 + +1.6 55,154 - -0.4 55,164 + +1.7 55,164 + +0.7 55,164 + +0.1 55,164 + +0.1 55,164 + -0.4 55,164 + -0.8 55,164 + -0.5 55,164 + +0.1 55,164 + +0.7 55,164 + +1.2 55,164 + +0.3 55,164 + +0.2 55,164 + +1.4 55,164 + -1.1 55,164 + +0.1 55,165 - -1.5 55,165 - +2.2 55,165 - -0.5 55,165 - +1.3 55,165 - -0.5 55,165 - +1.1 55,165 - -0.1 55,165 - -0.6 55,165 - -0.7 55,165 - -0.6 55,165 - -0.2 55,165 - +1.8 55,165 - +0.5 55,165 - +0.4 55,165 - +0.3 55,166 + -0.3 55,166 + +1.4 55,166 + +0.5 55,166 + -0.7 55,166 + -0.4 55,167 - +0.9 55,167 - +0.3 55,167 - +0.1 55,167 - +0.1 55,188 + -0.5 55,324 + Ac3H11_3372 0.10 -0.2 55,324 + Ac3H11_3372 0.10 -0.3 55,324 + Ac3H11_3372 0.10 -1.0 55,325 - +0.0 55,355 - Ac3H11_3372 0.14 +1.3 55,519 + Ac3H11_3372 0.33 -0.3 55,519 + Ac3H11_3372 0.33 +0.3 55,604 - Ac3H11_3372 0.44 -0.8 55,675 + Ac3H11_3372 0.52 +1.0 55,675 + Ac3H11_3372 0.52 +0.9 55,675 + Ac3H11_3372 0.52 +0.6 56,068 + +0.5 56,069 - +0.2 56,071 + -0.4 56,071 + +0.3 56,102 + -0.6 56,102 + -0.4 56,102 + +0.3 56,102 + +0.7 56,102 + -0.1 56,102 + +0.2 56,102 + +0.6 56,102 + +0.6 56,102 + -0.0 56,103 - +0.2 56,103 - -1.3 56,103 - -0.0 56,103 - -0.4 56,103 - +1.0 56,103 - -1.1 56,103 - +0.1 56,139 + +0.2 56,139 + +1.4 56,140 - -0.3 56,140 - +0.3 56,140 - -0.3 56,140 - +0.6 56,140 - +1.2 56,140 - +0.1 56,140 - -0.6 56,140 - -0.1 56,140 - -0.8 56,140 - +0.3 56,140 - +0.5 56,140 - -0.6 56,140 - +1.1 56,144 - +0.3 56,144 - -0.4
Or see this region's nucleotide sequence