Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2223 and Ac3H11_2224 are separated by 7 nucleotides Ac3H11_2224 and Ac3H11_2225 are separated by 102 nucleotides
Ac3H11_2223 - Probable Co/Zn/Cd efflux system membrane fusion protein, at 459,298 to 460,476
_2223
Ac3H11_2224 - Transcriptional regulator, TetR family, at 460,484 to 461,182
_2224
Ac3H11_2225 - Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11), at 461,285 to 461,821
_2225
Position (kb) 461
462 Strain fitness (log2 ratio) -2
-1
0
1
2 at 460.363 kb on - strand at 460.575 kb on + strand, within Ac3H11_2224 at 460.575 kb on + strand, within Ac3H11_2224 at 460.575 kb on + strand, within Ac3H11_2224 at 460.575 kb on + strand, within Ac3H11_2224 at 460.575 kb on + strand, within Ac3H11_2224 at 460.576 kb on - strand, within Ac3H11_2224 at 460.576 kb on - strand, within Ac3H11_2224 at 460.576 kb on - strand, within Ac3H11_2224 at 460.576 kb on - strand, within Ac3H11_2224 at 460.576 kb on - strand, within Ac3H11_2224 at 460.576 kb on - strand, within Ac3H11_2224 at 460.668 kb on + strand, within Ac3H11_2224 at 460.668 kb on + strand, within Ac3H11_2224 at 460.668 kb on + strand, within Ac3H11_2224 at 460.668 kb on + strand, within Ac3H11_2224 at 460.668 kb on + strand, within Ac3H11_2224 at 460.668 kb on + strand, within Ac3H11_2224 at 460.668 kb on + strand, within Ac3H11_2224 at 460.669 kb on - strand, within Ac3H11_2224 at 460.669 kb on - strand, within Ac3H11_2224 at 460.669 kb on - strand, within Ac3H11_2224 at 460.677 kb on + strand, within Ac3H11_2224 at 460.677 kb on + strand, within Ac3H11_2224 at 460.678 kb on - strand, within Ac3H11_2224 at 460.774 kb on - strand, within Ac3H11_2224 at 460.774 kb on - strand, within Ac3H11_2224 at 460.774 kb on - strand, within Ac3H11_2224 at 460.774 kb on - strand, within Ac3H11_2224 at 460.774 kb on - strand, within Ac3H11_2224 at 460.872 kb on + strand, within Ac3H11_2224 at 460.872 kb on + strand, within Ac3H11_2224 at 460.872 kb on + strand, within Ac3H11_2224 at 460.873 kb on - strand, within Ac3H11_2224 at 460.873 kb on - strand, within Ac3H11_2224 at 460.873 kb on - strand, within Ac3H11_2224 at 460.873 kb on - strand, within Ac3H11_2224 at 461.210 kb on - strand at 461.212 kb on + strand at 461.217 kb on + strand at 461.246 kb on + strand at 461.247 kb on - strand at 461.247 kb on - strand at 461.381 kb on + strand, within Ac3H11_2225 at 461.411 kb on + strand, within Ac3H11_2225 at 461.411 kb on + strand, within Ac3H11_2225 at 461.411 kb on + strand, within Ac3H11_2225 at 461.412 kb on - strand, within Ac3H11_2225 at 461.412 kb on - strand, within Ac3H11_2225 at 461.412 kb on - strand, within Ac3H11_2225 at 461.582 kb on + strand, within Ac3H11_2225 at 461.582 kb on + strand, within Ac3H11_2225 at 461.582 kb on + strand, within Ac3H11_2225 at 461.582 kb on + strand, within Ac3H11_2225 at 461.582 kb on + strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.583 kb on - strand, within Ac3H11_2225 at 461.585 kb on + strand, within Ac3H11_2225 at 461.585 kb on + strand, within Ac3H11_2225 at 461.585 kb on + strand, within Ac3H11_2225 at 461.586 kb on - strand, within Ac3H11_2225 at 461.586 kb on - strand, within Ac3H11_2225 at 461.586 kb on - strand, within Ac3H11_2225 at 461.611 kb on + strand, within Ac3H11_2225 at 461.611 kb on + strand, within Ac3H11_2225 at 461.612 kb on - strand, within Ac3H11_2225 at 461.612 kb on - strand, within Ac3H11_2225 at 461.693 kb on + strand, within Ac3H11_2225 at 461.693 kb on + strand, within Ac3H11_2225 at 461.693 kb on + strand, within Ac3H11_2225 at 461.694 kb on - strand, within Ac3H11_2225 at 461.694 kb on - strand, within Ac3H11_2225 at 461.694 kb on - strand, within Ac3H11_2225 at 461.694 kb on - strand, within Ac3H11_2225 at 461.694 kb on - strand, within Ac3H11_2225 at 461.694 kb on - strand, within Ac3H11_2225 at 461.694 kb on - strand, within Ac3H11_2225 at 461.711 kb on + strand, within Ac3H11_2225 at 461.712 kb on - strand, within Ac3H11_2225 at 461.712 kb on - strand, within Ac3H11_2225 at 461.712 kb on - strand, within Ac3H11_2225 at 461.723 kb on + strand, within Ac3H11_2225 at 461.724 kb on - strand, within Ac3H11_2225 at 461.724 kb on - strand, within Ac3H11_2225 at 461.724 kb on - strand, within Ac3H11_2225 at 461.724 kb on - strand, within Ac3H11_2225 at 461.724 kb on - strand, within Ac3H11_2225 at 461.751 kb on - strand, within Ac3H11_2225 at 461.751 kb on - strand, within Ac3H11_2225 at 461.808 kb on - strand at 461.811 kb on + strand at 461.811 kb on + strand at 461.812 kb on - strand at 461.812 kb on - strand at 461.832 kb on + strand at 461.832 kb on + strand at 461.833 kb on - strand at 461.838 kb on - strand at 461.870 kb on - strand at 461.874 kb on - strand at 461.953 kb on - strand at 462.034 kb on - strand at 462.040 kb on + strand at 462.131 kb on + strand at 462.132 kb on - strand at 462.134 kb on - strand at 462.241 kb on + strand at 462.242 kb on - strand at 462.242 kb on - strand at 462.242 kb on - strand at 462.250 kb on + strand at 462.251 kb on - strand at 462.251 kb on - strand at 462.251 kb on - strand at 462.252 kb on + strand at 462.252 kb on + strand at 462.252 kb on + strand at 462.252 kb on + strand at 462.252 kb on + strand at 462.253 kb on - strand at 462.253 kb on - strand at 462.253 kb on - strand at 462.319 kb on + strand at 462.319 kb on + strand at 462.319 kb on + strand at 462.319 kb on + strand at 462.319 kb on + strand at 462.319 kb on + strand at 462.320 kb on - strand at 462.320 kb on - strand at 462.320 kb on - strand at 462.320 kb on - strand at 462.320 kb on - strand at 462.320 kb on - strand at 462.320 kb on - strand at 462.321 kb on + strand at 462.321 kb on + strand at 462.321 kb on + strand at 462.321 kb on + strand at 462.321 kb on + strand at 462.321 kb on + strand at 462.321 kb on + strand at 462.322 kb on - strand at 462.322 kb on - strand at 462.322 kb on - strand at 462.322 kb on - strand at 462.322 kb on - strand at 462.339 kb on + strand at 462.339 kb on + strand at 462.339 kb on + strand at 462.340 kb on - strand at 462.340 kb on - strand at 462.383 kb on + strand at 462.383 kb on + strand at 462.383 kb on + strand at 462.383 kb on + strand at 462.384 kb on - strand at 462.384 kb on - strand at 462.384 kb on - strand at 462.384 kb on - strand at 462.384 kb on - strand at 462.384 kb on - strand at 462.384 kb on - strand at 462.384 kb on - strand at 462.384 kb on - strand at 462.394 kb on - strand at 462.394 kb on - strand at 462.394 kb on - strand at 462.394 kb on - strand at 462.394 kb on - strand at 462.453 kb on + strand at 462.453 kb on + strand at 462.454 kb on - strand at 462.454 kb on - strand at 462.454 kb on - strand at 462.454 kb on - strand at 462.461 kb on + strand at 462.461 kb on + strand at 462.461 kb on + strand at 462.461 kb on + strand at 462.462 kb on - strand at 462.462 kb on - strand at 462.462 kb on - strand at 462.462 kb on - strand at 462.475 kb on - strand at 462.484 kb on - strand at 462.489 kb on + strand at 462.489 kb on + strand at 462.490 kb on - strand at 462.490 kb on - strand at 462.490 kb on - strand at 462.490 kb on - strand at 462.505 kb on + strand at 462.537 kb on + strand at 462.537 kb on + strand at 462.550 kb on + strand at 462.550 kb on + strand at 462.575 kb on + strand at 462.575 kb on + strand at 462.580 kb on + strand at 462.580 kb on + strand at 462.581 kb on - strand at 462.592 kb on + strand at 462.593 kb on - strand at 462.616 kb on + strand at 462.624 kb on + strand at 462.625 kb on - strand at 462.643 kb on + strand at 462.704 kb on + strand at 462.704 kb on + strand at 462.704 kb on + strand at 462.705 kb on - strand at 462.705 kb on - strand at 462.718 kb on - strand at 462.718 kb on - strand at 462.718 kb on - strand at 462.744 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 460,363 - +0.8 460,575 + Ac3H11_2224 0.13 -1.0 460,575 + Ac3H11_2224 0.13 +0.2 460,575 + Ac3H11_2224 0.13 -0.5 460,575 + Ac3H11_2224 0.13 -0.6 460,575 + Ac3H11_2224 0.13 -0.6 460,576 - Ac3H11_2224 0.13 -0.5 460,576 - Ac3H11_2224 0.13 +1.1 460,576 - Ac3H11_2224 0.13 +0.0 460,576 - Ac3H11_2224 0.13 -1.3 460,576 - Ac3H11_2224 0.13 +1.4 460,576 - Ac3H11_2224 0.13 -1.0 460,668 + Ac3H11_2224 0.26 -1.4 460,668 + Ac3H11_2224 0.26 -0.5 460,668 + Ac3H11_2224 0.26 -0.5 460,668 + Ac3H11_2224 0.26 -1.1 460,668 + Ac3H11_2224 0.26 -1.3 460,668 + Ac3H11_2224 0.26 -0.5 460,668 + Ac3H11_2224 0.26 +0.2 460,669 - Ac3H11_2224 0.26 -0.9 460,669 - Ac3H11_2224 0.26 +0.3 460,669 - Ac3H11_2224 0.26 -0.2 460,677 + Ac3H11_2224 0.28 -0.7 460,677 + Ac3H11_2224 0.28 -0.9 460,678 - Ac3H11_2224 0.28 +0.5 460,774 - Ac3H11_2224 0.41 -0.7 460,774 - Ac3H11_2224 0.41 +0.0 460,774 - Ac3H11_2224 0.41 -1.0 460,774 - Ac3H11_2224 0.41 -0.1 460,774 - Ac3H11_2224 0.41 -0.3 460,872 + Ac3H11_2224 0.56 -0.5 460,872 + Ac3H11_2224 0.56 +0.9 460,872 + Ac3H11_2224 0.56 +0.0 460,873 - Ac3H11_2224 0.56 -0.3 460,873 - Ac3H11_2224 0.56 -1.7 460,873 - Ac3H11_2224 0.56 +0.2 460,873 - Ac3H11_2224 0.56 +2.2 461,210 - +2.3 461,212 + -0.8 461,217 + -0.1 461,246 + -0.9 461,247 - -2.3 461,247 - +0.4 461,381 + Ac3H11_2225 0.18 -0.3 461,411 + Ac3H11_2225 0.23 +0.1 461,411 + Ac3H11_2225 0.23 +0.0 461,411 + Ac3H11_2225 0.23 -1.3 461,412 - Ac3H11_2225 0.24 -0.7 461,412 - Ac3H11_2225 0.24 +1.3 461,412 - Ac3H11_2225 0.24 -0.7 461,582 + Ac3H11_2225 0.55 -2.1 461,582 + Ac3H11_2225 0.55 -0.5 461,582 + Ac3H11_2225 0.55 +0.5 461,582 + Ac3H11_2225 0.55 -0.5 461,582 + Ac3H11_2225 0.55 +0.3 461,583 - Ac3H11_2225 0.55 +0.9 461,583 - Ac3H11_2225 0.55 +0.9 461,583 - Ac3H11_2225 0.55 +0.2 461,583 - Ac3H11_2225 0.55 +0.4 461,583 - Ac3H11_2225 0.55 -0.7 461,583 - Ac3H11_2225 0.55 -0.4 461,583 - Ac3H11_2225 0.55 -0.1 461,583 - Ac3H11_2225 0.55 -0.0 461,583 - Ac3H11_2225 0.55 +0.9 461,583 - Ac3H11_2225 0.55 -0.4 461,583 - Ac3H11_2225 0.55 -0.5 461,585 + Ac3H11_2225 0.56 +0.2 461,585 + Ac3H11_2225 0.56 -1.3 461,585 + Ac3H11_2225 0.56 +0.6 461,586 - Ac3H11_2225 0.56 +0.1 461,586 - Ac3H11_2225 0.56 +0.3 461,586 - Ac3H11_2225 0.56 -0.2 461,611 + Ac3H11_2225 0.61 +0.8 461,611 + Ac3H11_2225 0.61 -0.5 461,612 - Ac3H11_2225 0.61 +0.7 461,612 - Ac3H11_2225 0.61 -0.1 461,693 + Ac3H11_2225 0.76 -1.0 461,693 + Ac3H11_2225 0.76 +1.3 461,693 + Ac3H11_2225 0.76 -1.0 461,694 - Ac3H11_2225 0.76 -1.0 461,694 - Ac3H11_2225 0.76 +0.4 461,694 - Ac3H11_2225 0.76 +0.7 461,694 - Ac3H11_2225 0.76 +1.3 461,694 - Ac3H11_2225 0.76 -0.2 461,694 - Ac3H11_2225 0.76 -1.4 461,694 - Ac3H11_2225 0.76 +0.4 461,711 + Ac3H11_2225 0.79 +0.5 461,712 - Ac3H11_2225 0.80 -1.4 461,712 - Ac3H11_2225 0.80 -0.0 461,712 - Ac3H11_2225 0.80 -0.5 461,723 + Ac3H11_2225 0.82 +0.2 461,724 - Ac3H11_2225 0.82 -0.5 461,724 - Ac3H11_2225 0.82 +0.1 461,724 - Ac3H11_2225 0.82 +0.1 461,724 - Ac3H11_2225 0.82 -0.3 461,724 - Ac3H11_2225 0.82 -0.4 461,751 - Ac3H11_2225 0.87 -0.1 461,751 - Ac3H11_2225 0.87 -0.1 461,808 - -0.3 461,811 + +0.6 461,811 + -1.1 461,812 - -0.8 461,812 - +0.2 461,832 + +0.7 461,832 + +1.5 461,833 - -0.0 461,838 - +0.4 461,870 - -1.6 461,874 - +0.3 461,953 - -0.7 462,034 - -0.6 462,040 + +0.3 462,131 + -0.9 462,132 - -0.4 462,134 - -0.3 462,241 + +0.4 462,242 - -0.4 462,242 - -0.1 462,242 - +0.7 462,250 + -0.4 462,251 - +1.6 462,251 - +0.1 462,251 - +0.6 462,252 + -0.2 462,252 + -0.8 462,252 + +0.9 462,252 + +0.7 462,252 + +0.1 462,253 - +0.0 462,253 - +0.7 462,253 - -0.9 462,319 + +0.1 462,319 + -0.6 462,319 + +0.0 462,319 + -2.4 462,319 + +0.2 462,319 + +1.2 462,320 - -1.8 462,320 - +0.6 462,320 - +0.5 462,320 - +1.3 462,320 - +0.2 462,320 - +0.4 462,320 - +0.6 462,321 + +0.1 462,321 + -0.2 462,321 + -0.4 462,321 + -0.7 462,321 + +1.0 462,321 + +0.1 462,321 + -0.1 462,322 - -0.7 462,322 - -0.2 462,322 - +0.1 462,322 - -0.1 462,322 - +1.2 462,339 + -1.6 462,339 + -0.1 462,339 + +0.3 462,340 - -0.5 462,340 - -0.1 462,383 + +0.7 462,383 + +0.7 462,383 + -0.5 462,383 + +1.3 462,384 - +0.2 462,384 - -0.2 462,384 - -0.4 462,384 - -0.0 462,384 - +0.2 462,384 - +0.0 462,384 - -0.9 462,384 - -1.0 462,384 - +0.1 462,394 - +0.3 462,394 - +0.5 462,394 - -0.2 462,394 - +0.8 462,394 - -1.1 462,453 + +1.0 462,453 + -0.3 462,454 - -0.2 462,454 - +0.7 462,454 - -0.0 462,454 - +0.1 462,461 + +0.5 462,461 + -0.0 462,461 + +0.3 462,461 + +0.7 462,462 - +0.7 462,462 - -0.5 462,462 - +0.0 462,462 - -0.0 462,475 - +0.2 462,484 - +1.2 462,489 + +0.4 462,489 + +0.5 462,490 - +2.0 462,490 - -0.4 462,490 - +0.2 462,490 - +0.4 462,505 + -0.8 462,537 + -0.7 462,537 + -0.8 462,550 + +0.6 462,550 + -1.3 462,575 + -0.3 462,575 + -0.3 462,580 + +0.6 462,580 + +0.0 462,581 - +0.0 462,592 + -0.5 462,593 - -2.0 462,616 + +0.6 462,624 + -1.0 462,625 - -0.2 462,643 + +0.9 462,704 + +0.4 462,704 + +0.7 462,704 + -0.4 462,705 - -0.9 462,705 - -0.4 462,718 - +1.0 462,718 - -1.2 462,718 - +0.2 462,744 - -0.1
Or see this region's nucleotide sequence