Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_2079 and Ac3H11_2080 are separated by 178 nucleotides Ac3H11_2080 and Ac3H11_2081 are separated by 593 nucleotides Ac3H11_2081 and Ac3H11_2082 are separated by 99 nucleotides
Ac3H11_2079 - Membrane protein TerC, possibly involved in tellurium resistance, at 304,898 to 305,584
_2079
Ac3H11_2080 - hypothetical protein, at 305,763 to 305,879
_2080
Ac3H11_2081 - Gluconolactonase (EC 3.1.1.17), at 306,473 to 307,423
_2081
Ac3H11_2082 - Phosphogluconate dehydratase (EC 4.2.1.12), at 307,523 to 309,292
_2082
Position (kb) 306
307
308 Strain fitness (log2 ratio) -2
-1
0
1
2 at 305.576 kb on + strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.577 kb on - strand at 305.585 kb on - strand at 305.585 kb on - strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.600 kb on + strand at 305.601 kb on - strand at 305.601 kb on - strand at 305.665 kb on + strand at 305.665 kb on + strand at 305.666 kb on - strand at 305.666 kb on - strand at 305.666 kb on - strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.693 kb on + strand at 305.694 kb on - strand at 305.703 kb on + strand at 305.704 kb on - strand at 305.704 kb on - strand at 305.840 kb on + strand, within Ac3H11_2080 at 305.840 kb on + strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.841 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.858 kb on - strand, within Ac3H11_2080 at 305.870 kb on + strand at 305.870 kb on + strand at 305.870 kb on + strand at 305.870 kb on + strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.871 kb on - strand at 305.926 kb on + strand at 305.927 kb on - strand at 305.948 kb on - strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.958 kb on + strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.959 kb on - strand at 305.966 kb on + strand at 305.966 kb on + strand at 305.966 kb on + strand at 305.967 kb on - strand at 305.967 kb on - strand at 305.967 kb on - strand at 306.072 kb on + strand at 306.073 kb on - strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.076 kb on + strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.077 kb on - strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.164 kb on + strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.165 kb on - strand at 306.221 kb on - strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.272 kb on + strand at 306.273 kb on - strand at 306.273 kb on - strand at 306.273 kb on - strand at 306.304 kb on + strand at 307.469 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 305,576 + +0.5 305,577 - -0.1 305,577 - -0.3 305,577 - -0.6 305,577 - +1.2 305,577 - +0.2 305,577 - -0.8 305,585 - +0.1 305,585 - -0.7 305,600 + -1.3 305,600 + -0.7 305,600 + +0.1 305,600 + +1.1 305,600 + +0.6 305,600 + +0.1 305,601 - -0.0 305,601 - -0.6 305,665 + -0.4 305,665 + -0.2 305,666 - +0.8 305,666 - -0.5 305,666 - +0.2 305,693 + +0.4 305,693 + +0.1 305,693 + -0.8 305,693 + -0.5 305,693 + -0.9 305,694 - +0.5 305,703 + +0.9 305,704 - -0.5 305,704 - +0.9 305,840 + Ac3H11_2080 0.66 -0.0 305,840 + Ac3H11_2080 0.66 +0.1 305,841 - Ac3H11_2080 0.67 -0.1 305,841 - Ac3H11_2080 0.67 +0.2 305,841 - Ac3H11_2080 0.67 +0.1 305,841 - Ac3H11_2080 0.67 +0.5 305,858 - Ac3H11_2080 0.81 -0.3 305,858 - Ac3H11_2080 0.81 +0.4 305,858 - Ac3H11_2080 0.81 +0.5 305,870 + -0.4 305,870 + -0.5 305,870 + +1.0 305,870 + -1.9 305,871 - -0.1 305,871 - -1.3 305,871 - +1.4 305,871 - -1.4 305,871 - +0.2 305,871 - +1.3 305,926 + +0.2 305,927 - +0.1 305,948 - -0.2 305,958 + +0.5 305,958 + +0.2 305,958 + +0.9 305,958 + +0.1 305,958 + +0.7 305,958 + +0.2 305,958 + -0.5 305,958 + +0.7 305,959 - +0.1 305,959 - -1.0 305,959 - -0.1 305,959 - +0.2 305,959 - +1.0 305,966 + +0.3 305,966 + -0.6 305,966 + -1.1 305,967 - +0.2 305,967 - +0.3 305,967 - +0.1 306,072 + -2.1 306,073 - -0.9 306,076 + -1.3 306,076 + -0.6 306,076 + +0.3 306,076 + -0.1 306,076 + +1.1 306,076 + +0.4 306,076 + +0.1 306,077 - +2.1 306,077 - +0.6 306,077 - -0.9 306,077 - -0.1 306,077 - -0.3 306,077 - -0.0 306,164 + +0.1 306,164 + -0.5 306,164 + +0.2 306,164 + -0.6 306,164 + +0.6 306,164 + +0.6 306,164 + +1.1 306,164 + -0.2 306,164 + -0.6 306,164 + +1.7 306,165 - -0.6 306,165 - -0.2 306,165 - +0.4 306,165 - +0.7 306,165 - -0.5 306,165 - +0.9 306,165 - -0.5 306,165 - +0.0 306,221 - +1.0 306,272 + +0.5 306,272 + -0.8 306,272 + -0.4 306,272 + +1.7 306,272 + -0.3 306,272 + -1.8 306,273 - +0.5 306,273 - +0.2 306,273 - -1.7 306,304 + +0.2 307,469 + -0.2
Or see this region's nucleotide sequence