Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1946 and Ac3H11_1947 are separated by 46 nucleotides Ac3H11_1947 and Ac3H11_1948 are separated by 68 nucleotides Ac3H11_1948 and Ac3H11_1949 are separated by 94 nucleotides
Ac3H11_1946 - Lipid A export ATP-binding/permease protein MsbA, at 159,895 to 161,742
_1946
Ac3H11_1947 - D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95), at 161,789 to 162,721
_1947
Ac3H11_1948 - hypothetical protein, at 162,790 to 163,134
_1948
Ac3H11_1949 - TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein, at 163,229 to 164,266
_1949
Position (kb) 161
162
163 Strain fitness (log2 ratio) -2
-1
0
1
2 at 160.858 kb on + strand, within Ac3H11_1946 at 160.858 kb on + strand, within Ac3H11_1946 at 160.858 kb on + strand, within Ac3H11_1946 at 160.858 kb on + strand, within Ac3H11_1946 at 160.858 kb on + strand, within Ac3H11_1946 at 160.858 kb on + strand, within Ac3H11_1946 at 160.858 kb on + strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.859 kb on - strand, within Ac3H11_1946 at 160.888 kb on + strand, within Ac3H11_1946 at 160.888 kb on + strand, within Ac3H11_1946 at 160.945 kb on - strand, within Ac3H11_1946 at 161.035 kb on + strand, within Ac3H11_1946 at 161.164 kb on + strand, within Ac3H11_1946 at 161.164 kb on + strand, within Ac3H11_1946 at 161.165 kb on - strand, within Ac3H11_1946 at 161.281 kb on - strand, within Ac3H11_1946 at 161.290 kb on + strand, within Ac3H11_1946 at 161.290 kb on + strand, within Ac3H11_1946 at 161.291 kb on - strand, within Ac3H11_1946 at 161.291 kb on - strand, within Ac3H11_1946 at 161.291 kb on - strand, within Ac3H11_1946 at 161.303 kb on - strand, within Ac3H11_1946 at 161.303 kb on - strand, within Ac3H11_1946 at 161.392 kb on + strand, within Ac3H11_1946 at 161.868 kb on - strand at 162.296 kb on + strand, within Ac3H11_1947 at 162.335 kb on + strand, within Ac3H11_1947 at 162.335 kb on + strand, within Ac3H11_1947 at 162.336 kb on - strand, within Ac3H11_1947 at 162.554 kb on + strand, within Ac3H11_1947 at 162.554 kb on + strand, within Ac3H11_1947 at 162.555 kb on - strand, within Ac3H11_1947 at 162.772 kb on - strand at 162.786 kb on - strand at 163.018 kb on + strand, within Ac3H11_1948 at 163.019 kb on - strand, within Ac3H11_1948 at 163.019 kb on - strand, within Ac3H11_1948 at 163.019 kb on - strand, within Ac3H11_1948 at 163.133 kb on - strand at 163.168 kb on - strand at 163.230 kb on + strand at 163.305 kb on + strand at 163.306 kb on - strand at 163.306 kb on - strand at 163.306 kb on - strand at 163.549 kb on - strand, within Ac3H11_1949 at 163.549 kb on - strand, within Ac3H11_1949
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 160,858 + Ac3H11_1946 0.52 -0.4 160,858 + Ac3H11_1946 0.52 +0.2 160,858 + Ac3H11_1946 0.52 +0.5 160,858 + Ac3H11_1946 0.52 +0.0 160,858 + Ac3H11_1946 0.52 -0.1 160,858 + Ac3H11_1946 0.52 -0.1 160,858 + Ac3H11_1946 0.52 +0.0 160,859 - Ac3H11_1946 0.52 -0.0 160,859 - Ac3H11_1946 0.52 +0.6 160,859 - Ac3H11_1946 0.52 +1.1 160,859 - Ac3H11_1946 0.52 +0.3 160,859 - Ac3H11_1946 0.52 +0.9 160,859 - Ac3H11_1946 0.52 +0.4 160,859 - Ac3H11_1946 0.52 -0.3 160,859 - Ac3H11_1946 0.52 +0.2 160,859 - Ac3H11_1946 0.52 -1.2 160,888 + Ac3H11_1946 0.54 -0.7 160,888 + Ac3H11_1946 0.54 +0.1 160,945 - Ac3H11_1946 0.57 +0.6 161,035 + Ac3H11_1946 0.62 -0.8 161,164 + Ac3H11_1946 0.69 -0.4 161,164 + Ac3H11_1946 0.69 -1.1 161,165 - Ac3H11_1946 0.69 +1.3 161,281 - Ac3H11_1946 0.75 +0.2 161,290 + Ac3H11_1946 0.75 +0.4 161,290 + Ac3H11_1946 0.75 -0.4 161,291 - Ac3H11_1946 0.76 +0.4 161,291 - Ac3H11_1946 0.76 -0.1 161,291 - Ac3H11_1946 0.76 -1.8 161,303 - Ac3H11_1946 0.76 -0.0 161,303 - Ac3H11_1946 0.76 +1.8 161,392 + Ac3H11_1946 0.81 +0.7 161,868 - +0.6 162,296 + Ac3H11_1947 0.54 +0.7 162,335 + Ac3H11_1947 0.59 +0.1 162,335 + Ac3H11_1947 0.59 -0.3 162,336 - Ac3H11_1947 0.59 +0.3 162,554 + Ac3H11_1947 0.82 +0.7 162,554 + Ac3H11_1947 0.82 -1.1 162,555 - Ac3H11_1947 0.82 +0.7 162,772 - -0.4 162,786 - -0.9 163,018 + Ac3H11_1948 0.66 +0.2 163,019 - Ac3H11_1948 0.66 +0.5 163,019 - Ac3H11_1948 0.66 -0.0 163,019 - Ac3H11_1948 0.66 -0.7 163,133 - +0.3 163,168 - +1.2 163,230 + +1.1 163,305 + +0.2 163,306 - -0.2 163,306 - +0.5 163,306 - +0.6 163,549 - Ac3H11_1949 0.31 -0.5 163,549 - Ac3H11_1949 0.31 +0.5
Or see this region's nucleotide sequence