Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_1033 and Ac3H11_1034 are separated by 92 nucleotides Ac3H11_1034 and Ac3H11_1035 are separated by 52 nucleotides Ac3H11_1035 and Ac3H11_1036 are separated by 30 nucleotides
Ac3H11_1033 - Nitric oxide-dependent regulator DnrN or NorA, at 151,790 to 152,560
_1033
Ac3H11_1034 - Nitrite-sensitive transcriptional repressor NsrR, at 152,653 to 153,192
_1034
Ac3H11_1035 - Transcriptional regulator, AraC family, at 153,245 to 154,267
_1035
Ac3H11_1036 - Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16), at 154,298 to 156,409
_1036
Position (kb) 153
154
155 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 152.284 kb on + strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.285 kb on - strand, within Ac3H11_1033 at 152.622 kb on + strand at 152.622 kb on + strand at 152.622 kb on + strand at 152.623 kb on - strand at 152.623 kb on - strand at 152.677 kb on + strand at 152.678 kb on - strand at 152.678 kb on - strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.698 kb on + strand at 152.699 kb on - strand at 152.699 kb on - strand at 152.699 kb on - strand at 152.699 kb on - strand at 152.759 kb on - strand, within Ac3H11_1034 at 153.011 kb on - strand, within Ac3H11_1034 at 153.011 kb on - strand, within Ac3H11_1034 at 153.011 kb on - strand, within Ac3H11_1034 at 153.011 kb on - strand, within Ac3H11_1034 at 153.975 kb on + strand, within Ac3H11_1035 at 153.975 kb on + strand, within Ac3H11_1035 at 153.975 kb on + strand, within Ac3H11_1035 at 153.975 kb on + strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 153.976 kb on - strand, within Ac3H11_1035 at 154.140 kb on + strand, within Ac3H11_1035 at 154.140 kb on + strand, within Ac3H11_1035 at 154.141 kb on - strand, within Ac3H11_1035 at 154.141 kb on - strand, within Ac3H11_1035 at 154.653 kb on - strand, within Ac3H11_1036 at 154.653 kb on - strand, within Ac3H11_1036 at 154.653 kb on - strand, within Ac3H11_1036 at 154.717 kb on - strand, within Ac3H11_1036 at 154.717 kb on - strand, within Ac3H11_1036 at 154.717 kb on - strand, within Ac3H11_1036 at 154.732 kb on - strand, within Ac3H11_1036 at 154.732 kb on - strand, within Ac3H11_1036 at 154.732 kb on - strand, within Ac3H11_1036 at 154.732 kb on - strand, within Ac3H11_1036
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 152,284 + Ac3H11_1033 0.64 -1.8 152,285 - Ac3H11_1033 0.64 -0.3 152,285 - Ac3H11_1033 0.64 -0.2 152,285 - Ac3H11_1033 0.64 +0.0 152,285 - Ac3H11_1033 0.64 +0.8 152,285 - Ac3H11_1033 0.64 +0.0 152,622 + -1.2 152,622 + -0.3 152,622 + +0.4 152,623 - -0.3 152,623 - +0.6 152,677 + +0.6 152,678 - +1.1 152,678 - +0.1 152,698 + +0.3 152,698 + +0.7 152,698 + -0.5 152,698 + -0.0 152,698 + +0.2 152,698 + -0.8 152,698 + +0.1 152,699 - -0.5 152,699 - -0.6 152,699 - -0.2 152,699 - +0.0 152,759 - Ac3H11_1034 0.20 -0.2 153,011 - Ac3H11_1034 0.66 -0.2 153,011 - Ac3H11_1034 0.66 +1.3 153,011 - Ac3H11_1034 0.66 +0.0 153,011 - Ac3H11_1034 0.66 +0.4 153,975 + Ac3H11_1035 0.71 +0.0 153,975 + Ac3H11_1035 0.71 +0.2 153,975 + Ac3H11_1035 0.71 -0.4 153,975 + Ac3H11_1035 0.71 -0.2 153,976 - Ac3H11_1035 0.71 -0.1 153,976 - Ac3H11_1035 0.71 -0.7 153,976 - Ac3H11_1035 0.71 +1.2 153,976 - Ac3H11_1035 0.71 -0.1 153,976 - Ac3H11_1035 0.71 -0.2 154,140 + Ac3H11_1035 0.87 -0.1 154,140 + Ac3H11_1035 0.87 -0.8 154,141 - Ac3H11_1035 0.88 +0.9 154,141 - Ac3H11_1035 0.88 -1.3 154,653 - Ac3H11_1036 0.17 -0.5 154,653 - Ac3H11_1036 0.17 -0.0 154,653 - Ac3H11_1036 0.17 -0.2 154,717 - Ac3H11_1036 0.20 +1.7 154,717 - Ac3H11_1036 0.20 +0.0 154,717 - Ac3H11_1036 0.20 -0.4 154,732 - Ac3H11_1036 0.21 -3.1 154,732 - Ac3H11_1036 0.21 -0.3 154,732 - Ac3H11_1036 0.21 +0.1 154,732 - Ac3H11_1036 0.21 +0.4
Or see this region's nucleotide sequence