Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS25030 and AZOBR_RS25035 overlap by 1 nucleotides AZOBR_RS25035 and AZOBR_RS25040 overlap by 1 nucleotides
AZOBR_RS25030: AZOBR_RS25030 - hypothetical protein, at 670,227 to 673,553
_RS25030
AZOBR_RS25035: AZOBR_RS25035 - hypothetical protein, at 673,553 to 674,992
_RS25035
AZOBR_RS25040: AZOBR_RS25040 - hypothetical protein, at 674,992 to 676,782
_RS25040
Position (kb) 673
674
675 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 672.831 kb on + strand, within AZOBR_RS25030 at 672.831 kb on + strand, within AZOBR_RS25030 at 672.831 kb on + strand, within AZOBR_RS25030 at 672.831 kb on + strand, within AZOBR_RS25030 at 672.832 kb on - strand, within AZOBR_RS25030 at 672.832 kb on - strand, within AZOBR_RS25030 at 672.832 kb on - strand, within AZOBR_RS25030 at 672.832 kb on - strand, within AZOBR_RS25030 at 672.876 kb on + strand, within AZOBR_RS25030 at 672.876 kb on + strand, within AZOBR_RS25030 at 672.876 kb on + strand, within AZOBR_RS25030 at 672.877 kb on - strand, within AZOBR_RS25030 at 672.918 kb on + strand, within AZOBR_RS25030 at 672.918 kb on + strand, within AZOBR_RS25030 at 672.918 kb on + strand, within AZOBR_RS25030 at 672.918 kb on + strand, within AZOBR_RS25030 at 672.918 kb on + strand, within AZOBR_RS25030 at 672.918 kb on + strand, within AZOBR_RS25030 at 672.919 kb on - strand, within AZOBR_RS25030 at 672.919 kb on - strand, within AZOBR_RS25030 at 672.919 kb on - strand, within AZOBR_RS25030 at 672.919 kb on - strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.924 kb on + strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.925 kb on - strand, within AZOBR_RS25030 at 672.934 kb on + strand, within AZOBR_RS25030 at 672.951 kb on + strand, within AZOBR_RS25030 at 672.952 kb on - strand, within AZOBR_RS25030 at 673.143 kb on + strand, within AZOBR_RS25030 at 673.143 kb on + strand, within AZOBR_RS25030 at 673.144 kb on - strand, within AZOBR_RS25030 at 673.144 kb on - strand, within AZOBR_RS25030 at 673.192 kb on + strand, within AZOBR_RS25030 at 673.308 kb on + strand at 673.308 kb on + strand at 673.308 kb on + strand at 673.309 kb on - strand at 673.317 kb on + strand at 673.349 kb on + strand at 673.349 kb on + strand at 673.349 kb on + strand at 673.350 kb on - strand at 673.366 kb on + strand at 673.370 kb on + strand at 673.370 kb on + strand at 673.370 kb on + strand at 673.370 kb on + strand at 673.370 kb on + strand at 673.386 kb on + strand at 673.389 kb on + strand at 673.389 kb on + strand at 673.389 kb on + strand at 673.389 kb on + strand at 673.389 kb on + strand at 673.390 kb on - strand at 673.390 kb on - strand at 673.431 kb on + strand at 673.432 kb on - strand at 673.520 kb on + strand at 673.520 kb on + strand at 673.521 kb on - strand at 673.521 kb on - strand at 673.673 kb on + strand at 673.673 kb on + strand at 673.673 kb on + strand at 673.674 kb on - strand at 673.674 kb on - strand at 673.674 kb on - strand at 673.674 kb on - strand at 673.700 kb on + strand, within AZOBR_RS25035 at 673.700 kb on + strand, within AZOBR_RS25035 at 673.700 kb on + strand, within AZOBR_RS25035 at 673.701 kb on - strand, within AZOBR_RS25035 at 673.701 kb on - strand, within AZOBR_RS25035 at 673.707 kb on - strand, within AZOBR_RS25035 at 673.760 kb on + strand, within AZOBR_RS25035 at 673.760 kb on + strand, within AZOBR_RS25035 at 673.761 kb on - strand, within AZOBR_RS25035 at 673.761 kb on - strand, within AZOBR_RS25035 at 673.761 kb on - strand, within AZOBR_RS25035 at 673.761 kb on - strand, within AZOBR_RS25035 at 673.969 kb on + strand, within AZOBR_RS25035 at 673.970 kb on - strand, within AZOBR_RS25035 at 674.012 kb on + strand, within AZOBR_RS25035 at 674.012 kb on + strand, within AZOBR_RS25035 at 674.012 kb on + strand, within AZOBR_RS25035 at 674.013 kb on - strand, within AZOBR_RS25035 at 674.013 kb on - strand, within AZOBR_RS25035 at 674.289 kb on - strand, within AZOBR_RS25035 at 674.289 kb on - strand, within AZOBR_RS25035 at 674.289 kb on - strand, within AZOBR_RS25035 at 674.477 kb on + strand, within AZOBR_RS25035 at 674.477 kb on + strand, within AZOBR_RS25035 at 674.477 kb on + strand, within AZOBR_RS25035 at 674.477 kb on + strand, within AZOBR_RS25035 at 674.478 kb on - strand, within AZOBR_RS25035 at 674.478 kb on - strand, within AZOBR_RS25035 at 674.478 kb on - strand, within AZOBR_RS25035 at 674.478 kb on - strand, within AZOBR_RS25035 at 674.483 kb on + strand, within AZOBR_RS25035 at 674.519 kb on + strand, within AZOBR_RS25035 at 674.531 kb on + strand, within AZOBR_RS25035 at 674.531 kb on + strand, within AZOBR_RS25035 at 674.531 kb on + strand, within AZOBR_RS25035 at 674.531 kb on + strand, within AZOBR_RS25035 at 674.532 kb on - strand, within AZOBR_RS25035 at 674.532 kb on - strand, within AZOBR_RS25035 at 674.532 kb on - strand, within AZOBR_RS25035 at 674.532 kb on - strand, within AZOBR_RS25035 at 674.561 kb on + strand, within AZOBR_RS25035 at 674.636 kb on + strand, within AZOBR_RS25035 at 674.636 kb on + strand, within AZOBR_RS25035 at 674.636 kb on + strand, within AZOBR_RS25035 at 674.637 kb on - strand, within AZOBR_RS25035 at 674.642 kb on + strand, within AZOBR_RS25035 at 674.642 kb on + strand, within AZOBR_RS25035 at 674.642 kb on + strand, within AZOBR_RS25035 at 674.642 kb on + strand, within AZOBR_RS25035 at 674.642 kb on + strand, within AZOBR_RS25035 at 674.642 kb on + strand, within AZOBR_RS25035 at 674.643 kb on - strand, within AZOBR_RS25035 at 674.643 kb on - strand, within AZOBR_RS25035 at 674.643 kb on - strand, within AZOBR_RS25035 at 674.643 kb on - strand, within AZOBR_RS25035 at 674.702 kb on + strand, within AZOBR_RS25035 at 674.703 kb on - strand, within AZOBR_RS25035 at 674.823 kb on + strand, within AZOBR_RS25035 at 674.824 kb on - strand, within AZOBR_RS25035 at 674.824 kb on - strand, within AZOBR_RS25035 at 674.827 kb on + strand, within AZOBR_RS25035 at 674.827 kb on + strand, within AZOBR_RS25035 at 674.828 kb on - strand, within AZOBR_RS25035 at 674.834 kb on + strand, within AZOBR_RS25035 at 674.835 kb on - strand, within AZOBR_RS25035 at 674.840 kb on + strand, within AZOBR_RS25035 at 674.840 kb on + strand, within AZOBR_RS25035 at 674.840 kb on + strand, within AZOBR_RS25035 at 674.841 kb on - strand, within AZOBR_RS25035 at 674.873 kb on + strand at 674.873 kb on + strand at 674.873 kb on + strand at 674.873 kb on + strand at 674.874 kb on - strand at 674.874 kb on - strand at 674.874 kb on - strand at 674.959 kb on + strand at 674.960 kb on - strand at 674.960 kb on - strand at 674.963 kb on + strand at 674.964 kb on - strand at 675.039 kb on + strand at 675.256 kb on + strand, within AZOBR_RS25040 at 675.257 kb on - strand, within AZOBR_RS25040 at 675.388 kb on + strand, within AZOBR_RS25040 at 675.437 kb on - strand, within AZOBR_RS25040 at 675.439 kb on + strand, within AZOBR_RS25040 at 675.439 kb on + strand, within AZOBR_RS25040 at 675.440 kb on - strand, within AZOBR_RS25040 at 675.601 kb on + strand, within AZOBR_RS25040 at 675.601 kb on + strand, within AZOBR_RS25040 at 675.601 kb on + strand, within AZOBR_RS25040 at 675.602 kb on - strand, within AZOBR_RS25040 at 675.602 kb on - strand, within AZOBR_RS25040 at 675.602 kb on - strand, within AZOBR_RS25040 at 675.602 kb on - strand, within AZOBR_RS25040 at 675.608 kb on + strand, within AZOBR_RS25040 at 675.609 kb on - strand, within AZOBR_RS25040 at 675.644 kb on + strand, within AZOBR_RS25040 at 675.645 kb on - strand, within AZOBR_RS25040 at 675.646 kb on + strand, within AZOBR_RS25040 at 675.647 kb on - strand, within AZOBR_RS25040 at 675.647 kb on - strand, within AZOBR_RS25040 at 675.647 kb on - strand, within AZOBR_RS25040 at 675.647 kb on - strand, within AZOBR_RS25040 at 675.647 kb on - strand, within AZOBR_RS25040 at 675.647 kb on - strand, within AZOBR_RS25040 at 675.688 kb on + strand, within AZOBR_RS25040 at 675.688 kb on + strand, within AZOBR_RS25040 at 675.688 kb on + strand at 675.689 kb on - strand, within AZOBR_RS25040 at 675.689 kb on - strand, within AZOBR_RS25040 at 675.689 kb on - strand, within AZOBR_RS25040 at 675.706 kb on + strand, within AZOBR_RS25040 at 675.706 kb on + strand, within AZOBR_RS25040 at 675.707 kb on - strand, within AZOBR_RS25040 at 675.880 kb on - strand, within AZOBR_RS25040 at 675.964 kb on + strand, within AZOBR_RS25040 at 675.965 kb on - strand, within AZOBR_RS25040 at 675.970 kb on + strand, within AZOBR_RS25040 at 675.971 kb on - strand, within AZOBR_RS25040
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 672,831 + AZOBR_RS25030 0.78 -0.6 672,831 + AZOBR_RS25030 0.78 -1.0 672,831 + AZOBR_RS25030 0.78 -0.2 672,831 + AZOBR_RS25030 0.78 +0.3 672,832 - AZOBR_RS25030 0.78 -0.1 672,832 - AZOBR_RS25030 0.78 -1.2 672,832 - AZOBR_RS25030 0.78 +0.0 672,832 - AZOBR_RS25030 0.78 +0.1 672,876 + AZOBR_RS25030 0.80 -0.3 672,876 + AZOBR_RS25030 0.80 -0.3 672,876 + AZOBR_RS25030 0.80 +0.2 672,877 - AZOBR_RS25030 0.80 -0.2 672,918 + AZOBR_RS25030 0.81 +0.3 672,918 + AZOBR_RS25030 0.81 +0.0 672,918 + AZOBR_RS25030 0.81 -0.0 672,918 + AZOBR_RS25030 0.81 -0.9 672,918 + AZOBR_RS25030 0.81 +0.1 672,918 + AZOBR_RS25030 0.81 -0.3 672,919 - AZOBR_RS25030 0.81 -0.6 672,919 - AZOBR_RS25030 0.81 +0.3 672,919 - AZOBR_RS25030 0.81 -0.2 672,919 - AZOBR_RS25030 0.81 +0.1 672,924 + AZOBR_RS25030 0.81 -0.4 672,924 + AZOBR_RS25030 0.81 +0.4 672,924 + AZOBR_RS25030 0.81 +0.1 672,924 + AZOBR_RS25030 0.81 -0.6 672,924 + AZOBR_RS25030 0.81 +0.7 672,924 + AZOBR_RS25030 0.81 +0.0 672,924 + AZOBR_RS25030 0.81 -0.0 672,924 + AZOBR_RS25030 0.81 +0.0 672,924 + AZOBR_RS25030 0.81 +1.0 672,924 + AZOBR_RS25030 0.81 -0.1 672,924 + AZOBR_RS25030 0.81 +0.1 672,924 + AZOBR_RS25030 0.81 -0.7 672,924 + AZOBR_RS25030 0.81 -0.2 672,924 + AZOBR_RS25030 0.81 -2.5 672,924 + AZOBR_RS25030 0.81 -0.2 672,924 + AZOBR_RS25030 0.81 +0.0 672,924 + AZOBR_RS25030 0.81 -0.5 672,924 + AZOBR_RS25030 0.81 +0.3 672,924 + AZOBR_RS25030 0.81 -0.2 672,924 + AZOBR_RS25030 0.81 -0.1 672,925 - AZOBR_RS25030 0.81 -0.4 672,925 - AZOBR_RS25030 0.81 +0.2 672,925 - AZOBR_RS25030 0.81 +1.0 672,925 - AZOBR_RS25030 0.81 +0.2 672,925 - AZOBR_RS25030 0.81 -0.6 672,925 - AZOBR_RS25030 0.81 -0.4 672,925 - AZOBR_RS25030 0.81 -0.0 672,925 - AZOBR_RS25030 0.81 -0.1 672,925 - AZOBR_RS25030 0.81 -1.1 672,925 - AZOBR_RS25030 0.81 +1.4 672,925 - AZOBR_RS25030 0.81 -0.1 672,925 - AZOBR_RS25030 0.81 -0.1 672,925 - AZOBR_RS25030 0.81 -0.6 672,925 - AZOBR_RS25030 0.81 +0.6 672,925 - AZOBR_RS25030 0.81 -0.3 672,934 + AZOBR_RS25030 0.81 +0.1 672,951 + AZOBR_RS25030 0.82 -0.2 672,952 - AZOBR_RS25030 0.82 +1.1 673,143 + AZOBR_RS25030 0.88 -0.1 673,143 + AZOBR_RS25030 0.88 +0.2 673,144 - AZOBR_RS25030 0.88 -1.7 673,144 - AZOBR_RS25030 0.88 -0.3 673,192 + AZOBR_RS25030 0.89 +0.1 673,308 + +0.1 673,308 + -0.1 673,308 + +0.2 673,309 - +0.5 673,317 + +0.0 673,349 + -0.2 673,349 + -0.2 673,349 + +0.4 673,350 - +0.3 673,366 + -0.8 673,370 + +0.4 673,370 + -1.5 673,370 + +1.1 673,370 + +0.2 673,370 + +0.3 673,386 + +0.4 673,389 + -0.2 673,389 + -0.1 673,389 + -0.3 673,389 + +0.2 673,389 + +0.4 673,390 - -0.6 673,390 - -0.2 673,431 + -0.2 673,432 - -1.3 673,520 + -0.3 673,520 + -0.4 673,521 - +0.2 673,521 - -0.1 673,673 + +0.2 673,673 + +0.3 673,673 + +0.2 673,674 - -0.3 673,674 - -0.3 673,674 - +0.7 673,674 - -0.6 673,700 + AZOBR_RS25035 0.10 -1.1 673,700 + AZOBR_RS25035 0.10 -1.0 673,700 + AZOBR_RS25035 0.10 -0.8 673,701 - AZOBR_RS25035 0.10 -0.4 673,701 - AZOBR_RS25035 0.10 +0.2 673,707 - AZOBR_RS25035 0.11 -0.1 673,760 + AZOBR_RS25035 0.14 +0.2 673,760 + AZOBR_RS25035 0.14 -0.5 673,761 - AZOBR_RS25035 0.14 -0.6 673,761 - AZOBR_RS25035 0.14 +0.1 673,761 - AZOBR_RS25035 0.14 -0.3 673,761 - AZOBR_RS25035 0.14 -0.3 673,969 + AZOBR_RS25035 0.29 +0.0 673,970 - AZOBR_RS25035 0.29 -0.2 674,012 + AZOBR_RS25035 0.32 -0.4 674,012 + AZOBR_RS25035 0.32 -1.1 674,012 + AZOBR_RS25035 0.32 -0.4 674,013 - AZOBR_RS25035 0.32 -1.2 674,013 - AZOBR_RS25035 0.32 -2.8 674,289 - AZOBR_RS25035 0.51 +0.2 674,289 - AZOBR_RS25035 0.51 +0.6 674,289 - AZOBR_RS25035 0.51 +0.2 674,477 + AZOBR_RS25035 0.64 +1.2 674,477 + AZOBR_RS25035 0.64 -0.0 674,477 + AZOBR_RS25035 0.64 +0.2 674,477 + AZOBR_RS25035 0.64 +0.2 674,478 - AZOBR_RS25035 0.64 +0.0 674,478 - AZOBR_RS25035 0.64 +0.4 674,478 - AZOBR_RS25035 0.64 +0.1 674,478 - AZOBR_RS25035 0.64 +0.1 674,483 + AZOBR_RS25035 0.65 -0.6 674,519 + AZOBR_RS25035 0.67 -1.1 674,531 + AZOBR_RS25035 0.68 +0.2 674,531 + AZOBR_RS25035 0.68 +0.0 674,531 + AZOBR_RS25035 0.68 +0.3 674,531 + AZOBR_RS25035 0.68 +0.3 674,532 - AZOBR_RS25035 0.68 +0.3 674,532 - AZOBR_RS25035 0.68 -0.1 674,532 - AZOBR_RS25035 0.68 +0.4 674,532 - AZOBR_RS25035 0.68 -0.5 674,561 + AZOBR_RS25035 0.70 -0.4 674,636 + AZOBR_RS25035 0.75 +0.3 674,636 + AZOBR_RS25035 0.75 -0.1 674,636 + AZOBR_RS25035 0.75 -1.1 674,637 - AZOBR_RS25035 0.75 +0.5 674,642 + AZOBR_RS25035 0.76 -0.5 674,642 + AZOBR_RS25035 0.76 +1.4 674,642 + AZOBR_RS25035 0.76 -0.1 674,642 + AZOBR_RS25035 0.76 -1.9 674,642 + AZOBR_RS25035 0.76 -2.5 674,642 + AZOBR_RS25035 0.76 +0.1 674,643 - AZOBR_RS25035 0.76 +0.4 674,643 - AZOBR_RS25035 0.76 +0.5 674,643 - AZOBR_RS25035 0.76 -0.0 674,643 - AZOBR_RS25035 0.76 -0.6 674,702 + AZOBR_RS25035 0.80 -0.6 674,703 - AZOBR_RS25035 0.80 +0.3 674,823 + AZOBR_RS25035 0.88 -0.3 674,824 - AZOBR_RS25035 0.88 -0.5 674,824 - AZOBR_RS25035 0.88 -0.3 674,827 + AZOBR_RS25035 0.88 -0.1 674,827 + AZOBR_RS25035 0.88 -0.3 674,828 - AZOBR_RS25035 0.89 -0.2 674,834 + AZOBR_RS25035 0.89 -1.8 674,835 - AZOBR_RS25035 0.89 -0.3 674,840 + AZOBR_RS25035 0.89 +0.5 674,840 + AZOBR_RS25035 0.89 -0.0 674,840 + AZOBR_RS25035 0.89 -0.3 674,841 - AZOBR_RS25035 0.89 +0.1 674,873 + +0.0 674,873 + -0.2 674,873 + +0.5 674,873 + -0.2 674,874 - +0.7 674,874 - -0.9 674,874 - -1.1 674,959 + -0.2 674,960 - -0.3 674,960 - -0.1 674,963 + -2.6 674,964 - -0.4 675,039 + -0.2 675,256 + AZOBR_RS25040 0.15 +0.3 675,257 - AZOBR_RS25040 0.15 +0.8 675,388 + AZOBR_RS25040 0.22 -0.2 675,437 - AZOBR_RS25040 0.25 -0.1 675,439 + AZOBR_RS25040 0.25 +0.5 675,439 + AZOBR_RS25040 0.25 +0.1 675,440 - AZOBR_RS25040 0.25 -0.2 675,601 + AZOBR_RS25040 0.34 -0.2 675,601 + AZOBR_RS25040 0.34 +0.1 675,601 + AZOBR_RS25040 0.34 +0.1 675,602 - AZOBR_RS25040 0.34 +0.4 675,602 - AZOBR_RS25040 0.34 -0.1 675,602 - AZOBR_RS25040 0.34 +0.3 675,602 - AZOBR_RS25040 0.34 +0.1 675,608 + AZOBR_RS25040 0.34 -0.2 675,609 - AZOBR_RS25040 0.34 -0.1 675,644 + AZOBR_RS25040 0.36 -0.3 675,645 - AZOBR_RS25040 0.36 -0.6 675,646 + AZOBR_RS25040 0.37 -0.1 675,647 - AZOBR_RS25040 0.37 +0.2 675,647 - AZOBR_RS25040 0.37 +0.0 675,647 - AZOBR_RS25040 0.37 +0.3 675,647 - AZOBR_RS25040 0.37 +0.7 675,647 - AZOBR_RS25040 0.37 -1.6 675,647 - AZOBR_RS25040 0.37 -0.4 675,688 + AZOBR_RS25040 0.39 -0.2 675,688 + AZOBR_RS25040 0.39 +0.4 675,688 + +2.2 675,689 - AZOBR_RS25040 0.39 +0.6 675,689 - AZOBR_RS25040 0.39 -0.6 675,689 - AZOBR_RS25040 0.39 +0.1 675,706 + AZOBR_RS25040 0.40 -0.0 675,706 + AZOBR_RS25040 0.40 -0.7 675,707 - AZOBR_RS25040 0.40 -0.0 675,880 - AZOBR_RS25040 0.50 -0.2 675,964 + AZOBR_RS25040 0.54 +0.3 675,965 - AZOBR_RS25040 0.54 -0.8 675,970 + AZOBR_RS25040 0.55 -1.0 675,971 - AZOBR_RS25040 0.55 -0.4
Or see this region's nucleotide sequence