Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS04330

Experiment: a-Ketoglutaric (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS04320 and AZOBR_RS04325 are separated by 153 nucleotidesAZOBR_RS04325 and AZOBR_RS04330 are separated by 47 nucleotidesAZOBR_RS04330 and AZOBR_RS04335 are separated by 306 nucleotides AZOBR_RS04320: AZOBR_RS04320 - exported protein of unknown function, at 908,176 to 908,610 _RS04320 AZOBR_RS04325: AZOBR_RS04325 - glutaredoxin, at 908,764 to 909,105 _RS04325 AZOBR_RS04330: AZOBR_RS04330 - ATP-binding protein, at 909,153 to 909,392 _RS04330 AZOBR_RS04335: AZOBR_RS04335 - phosphoribosylformylglycinamidine synthase, at 909,699 to 911,915 _RS04335 Position (kb) 909 910Strain fitness (log2 ratio) -3 -2 -1 0 1at 909.122 kb on - strandat 909.122 kb on - strandat 909.155 kb on - strandat 909.441 kb on - strandat 909.443 kb on - strandat 909.718 kb on + strandat 909.718 kb on + strandat 909.718 kb on + strandat 909.719 kb on - strandat 909.892 kb on + strandat 909.892 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Ketoglutaric (C)
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909,122 - +0.2
909,122 - -0.1
909,155 - +0.5
909,441 - +0.2
909,443 - +0.3
909,718 + -0.6
909,718 + -0.9
909,718 + -0.8
909,719 - -0.7
909,892 + -1.3
909,892 + -3.5

Or see this region's nucleotide sequence