Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT1522 and BT1523 are separated by 35 nucleotides BT1523 and BT1524 are separated by 39 nucleotides BT1524 and BT1525 are separated by 14 nucleotides BT1525 and BT1526 are separated by 149 nucleotides
BT1522: BT1522 - putative aureobasidin A resistance protein (NCBI ptt file), at 1,877,238 to 1,878,155
BT1522
BT1523: BT1523 - CDP-diacylglycerol-inositol 3-phosphatidyltransferase (NCBI ptt file), at 1,878,191 to 1,878,859
BT1523
BT1524: BT1524 - hypothetical protein (NCBI ptt file), at 1,878,899 to 1,879,363
BT1524
BT1525: BT1525 - phosphatidylglycerophosphatase A (NCBI ptt file), at 1,879,378 to 1,879,857
BT1525
BT1526: BT1526 - myo-inositol-1-phosphate synthase (NCBI ptt file), at 1,880,007 to 1,881,296
BT1526
Position (kb)
1878
1879
1880 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1878.193 kb on - strand at 1878.773 kb on - strand, within BT1523 at 1878.803 kb on + strand at 1878.859 kb on + strand at 1878.931 kb on + strand at 1879.049 kb on + strand, within BT1524 at 1879.127 kb on + strand, within BT1524 at 1879.240 kb on - strand, within BT1524 at 1879.423 kb on + strand at 1879.435 kb on + strand, within BT1525 at 1879.758 kb on + strand, within BT1525 at 1880.013 kb on + strand at 1880.018 kb on - strand at 1880.211 kb on - strand, within BT1526 at 1880.248 kb on - strand, within BT1526
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,878,193 - +2.7 1,878,773 - BT1523 0.87 -0.0 1,878,803 + -2.6 1,878,859 + -3.3 1,878,931 + -2.2 1,879,049 + BT1524 0.32 -2.6 1,879,127 + BT1524 0.49 -2.6 1,879,240 - BT1524 0.73 -2.2 1,879,423 + -2.6 1,879,435 + BT1525 0.12 -3.1 1,879,758 + BT1525 0.79 -1.8 1,880,013 + -2.8 1,880,018 - -0.8 1,880,211 - BT1526 0.16 +0.5 1,880,248 - BT1526 0.19 +1.3
Or see this region's nucleotide sequence