Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3882 and Ac3H11_3883 overlap by 4 nucleotides Ac3H11_3883 and Ac3H11_3884 are separated by 26 nucleotides Ac3H11_3884 and Ac3H11_3885 overlap by 4 nucleotides Ac3H11_3885 and Ac3H11_3886 are separated by 31 nucleotides
Ac3H11_3882 - Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone, at 101,831 to 102,454
_3882
Ac3H11_3883 - Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB, at 102,451 to 103,323
_3883
Ac3H11_3884 - Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA, at 103,350 to 104,534
_3884
Ac3H11_3885 - Probable transmembrane protein, at 104,531 to 105,184
_3885
Ac3H11_3886 - Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion, at 105,216 to 106,022
_3886
Position (kb) 103
104
105 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.631 kb on - strand, within Ac3H11_3884 at 103.802 kb on - strand, within Ac3H11_3884 at 103.802 kb on - strand, within Ac3H11_3884 at 103.802 kb on - strand, within Ac3H11_3884 at 103.923 kb on - strand, within Ac3H11_3884 at 104.513 kb on - strand at 104.513 kb on - strand at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.677 kb on - strand, within Ac3H11_3885 at 104.875 kb on - strand, within Ac3H11_3885 at 104.875 kb on - strand, within Ac3H11_3885 at 104.875 kb on - strand, within Ac3H11_3885 at 104.875 kb on - strand, within Ac3H11_3885 at 105.027 kb on + strand, within Ac3H11_3885 at 105.028 kb on - strand, within Ac3H11_3885 at 105.057 kb on + strand, within Ac3H11_3885 at 105.057 kb on + strand, within Ac3H11_3885 at 105.058 kb on - strand, within Ac3H11_3885 at 105.058 kb on - strand, within Ac3H11_3885 at 105.058 kb on - strand, within Ac3H11_3885 at 105.058 kb on - strand, within Ac3H11_3885 at 105.061 kb on - strand, within Ac3H11_3885 at 105.061 kb on - strand, within Ac3H11_3885 at 105.061 kb on - strand, within Ac3H11_3885 at 105.061 kb on - strand, within Ac3H11_3885 at 105.275 kb on - strand at 105.275 kb on - strand at 105.275 kb on - strand at 105.275 kb on - strand at 105.275 kb on - strand at 105.275 kb on - strand at 105.325 kb on + strand, within Ac3H11_3886 at 105.326 kb on - strand, within Ac3H11_3886
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 103,631 - Ac3H11_3884 0.24 +0.4 103,631 - Ac3H11_3884 0.24 -1.7 103,631 - Ac3H11_3884 0.24 +1.6 103,631 - Ac3H11_3884 0.24 -1.3 103,631 - Ac3H11_3884 0.24 -0.8 103,631 - Ac3H11_3884 0.24 -1.1 103,631 - Ac3H11_3884 0.24 -0.6 103,631 - Ac3H11_3884 0.24 -0.2 103,631 - Ac3H11_3884 0.24 +0.2 103,631 - Ac3H11_3884 0.24 +0.9 103,631 - Ac3H11_3884 0.24 -0.2 103,631 - Ac3H11_3884 0.24 -1.6 103,631 - Ac3H11_3884 0.24 -0.4 103,802 - Ac3H11_3884 0.38 -2.2 103,802 - Ac3H11_3884 0.38 -0.3 103,802 - Ac3H11_3884 0.38 +0.2 103,923 - Ac3H11_3884 0.48 -1.0 104,513 - +0.5 104,513 - -0.2 104,677 - Ac3H11_3885 0.22 +0.6 104,677 - Ac3H11_3885 0.22 -3.7 104,677 - Ac3H11_3885 0.22 +0.0 104,677 - Ac3H11_3885 0.22 +0.5 104,677 - Ac3H11_3885 0.22 +0.6 104,677 - Ac3H11_3885 0.22 -0.7 104,677 - Ac3H11_3885 0.22 +0.6 104,677 - Ac3H11_3885 0.22 -0.2 104,677 - Ac3H11_3885 0.22 +1.5 104,677 - Ac3H11_3885 0.22 -0.7 104,677 - Ac3H11_3885 0.22 -0.4 104,677 - Ac3H11_3885 0.22 -0.2 104,677 - Ac3H11_3885 0.22 -0.7 104,875 - Ac3H11_3885 0.53 -0.2 104,875 - Ac3H11_3885 0.53 +1.0 104,875 - Ac3H11_3885 0.53 -1.0 104,875 - Ac3H11_3885 0.53 +0.5 105,027 + Ac3H11_3885 0.76 -0.7 105,028 - Ac3H11_3885 0.76 -0.3 105,057 + Ac3H11_3885 0.80 +2.0 105,057 + Ac3H11_3885 0.80 -1.5 105,058 - Ac3H11_3885 0.81 -1.2 105,058 - Ac3H11_3885 0.81 +0.9 105,058 - Ac3H11_3885 0.81 +0.2 105,058 - Ac3H11_3885 0.81 +0.0 105,061 - Ac3H11_3885 0.81 -0.8 105,061 - Ac3H11_3885 0.81 +3.0 105,061 - Ac3H11_3885 0.81 +0.3 105,061 - Ac3H11_3885 0.81 +0.4 105,275 - +0.3 105,275 - -1.1 105,275 - +0.5 105,275 - -0.2 105,275 - -1.2 105,275 - -0.2 105,325 + Ac3H11_3886 0.14 -1.4 105,326 - Ac3H11_3886 0.14 -1.2
Or see this region's nucleotide sequence