Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22965

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
5,042,849	+		AO353_22955	0.79	+0.8
5,042,849	+		AO353_22955	0.79	-0.0
5,043,007	+				-1.3
5,043,007	+				-1.3
5,043,007	+				-0.5
5,043,008	-				-0.4
5,043,091	+				+0.1
5,043,091	+				-1.1
5,043,091	+				+0.2
5,043,092	-				-0.0
5,043,092	-				-1.3
5,043,093	+				-0.2
5,043,093	+				-0.0
5,043,094	-				-1.6
5,043,094	-				-0.0
5,043,094	-				+0.1
5,043,132	+				-0.6
5,043,132	+				+1.0
5,043,132	+				+0.8
5,043,132	+				-0.3
5,043,132	+				-0.1
5,043,133	-				-0.6
5,043,133	-				-0.5
5,043,133	-				-0.3
5,043,133	-				+0.3
5,043,133	-				+0.2
5,043,158	+				+0.7
5,043,158	+				-0.1
5,043,158	+				+0.5
5,043,158	+				+0.3
5,043,159	-				+0.0
5,043,159	-				-0.3
5,043,159	-				+0.1
5,043,159	-				-1.4
5,043,159	-				+0.0
5,043,159	-				-0.7
5,043,439	+		AO353_22960	0.43	-0.0
5,043,439	+		AO353_22960	0.43	-0.6
5,043,440	-		AO353_22960	0.43	-1.7
5,043,440	-		AO353_22960	0.43	-2.0
5,043,440	-		AO353_22960	0.43	+0.1
5,043,440	-		AO353_22960	0.43	+0.5
5,043,440	-		AO353_22960	0.43	+0.1
5,043,440	-		AO353_22960	0.43	-0.2
5,043,440	-		AO353_22960	0.43	-1.5
5,043,467	+		AO353_22960	0.47	+0.1
5,043,730	+		AO353_22960	0.84	-0.8
5,043,730	+		AO353_22960	0.84	+1.7
5,043,730	+		AO353_22960	0.84	+0.4
5,043,730	+		AO353_22960	0.84	+0.9
5,043,731	-		AO353_22960	0.84	-0.7
5,043,731	-		AO353_22960	0.84	-0.1
5,043,731	-		AO353_22960	0.84	-0.8
5,043,731	-		AO353_22960	0.84	-0.2
5,043,731	-		AO353_22960	0.84	-1.1
5,043,808	+				-1.3
5,043,809	-				+0.1
5,043,809	-				+0.0
5,043,809	-				+0.1
5,043,838	+				+0.3
5,043,838	+				+1.3
5,043,839	-				+0.5
5,043,839	-				-0.4
5,043,846	-				+0.2
5,043,846	-				-0.5
5,043,865	+				+0.5
5,043,865	+				-0.8
5,043,866	-				+0.5
5,043,866	-				-0.9
5,043,866	-				-1.1
5,043,866	-				+1.0
5,043,866	-				-0.5
5,043,866	-				-0.8
5,043,913	+				-0.9
5,043,913	+				+0.2
5,043,914	-				-0.7
5,043,952	+				-0.1
5,043,952	+				-1.3
5,043,952	+				+0.5
5,043,952	+				-0.4
5,043,952	+				-0.6
5,043,952	+				-2.7
5,043,952	+				+1.1
5,043,952	+				+0.2
5,043,953	-				+0.1
5,043,953	-				+0.7
5,043,953	-				-0.4
5,043,953	-				+1.1
5,043,955	-				-1.0
5,043,982	+		AO353_22965	0.11	-0.1
5,043,983	-		AO353_22965	0.11	+0.0
5,043,983	-		AO353_22965	0.11	-0.7
5,043,983	-		AO353_22965	0.11	+1.3
5,043,983	-		AO353_22965	0.11	-0.6
5,044,234	+		AO353_22965	0.31	-0.1
5,044,234	+		AO353_22965	0.31	-0.6
5,044,234	+		AO353_22965	0.31	-0.5
5,044,234	+		AO353_22965	0.31	-2.5
5,044,234	+		AO353_22965	0.31	-0.7
5,044,235	-		AO353_22965	0.31	+0.5
5,044,235	-		AO353_22965	0.31	-0.1
5,044,235	-		AO353_22965	0.31	+0.5
5,044,247	-		AO353_22965	0.32	+1.1
5,044,253	+		AO353_22965	0.32	-0.3
5,044,282	+		AO353_22965	0.35	-0.9
5,044,283	-		AO353_22965	0.35	+0.3
5,044,283	-		AO353_22965	0.35	+1.4
5,044,582	+		AO353_22965	0.58	+0.1
5,044,582	+		AO353_22965	0.58	-0.9
5,044,582	+		AO353_22965	0.58	+0.3
5,044,582	+		AO353_22965	0.58	-0.1
5,044,583	-		AO353_22965	0.58	+0.1
5,044,583	-		AO353_22965	0.58	-0.5
5,044,583	-		AO353_22965	0.58	-0.3
5,044,583	-		AO353_22965	0.58	+1.9
5,044,583	-		AO353_22965	0.58	+0.4
5,044,583	-		AO353_22965	0.58	+0.5
5,044,583	-		AO353_22965	0.58	+0.6
5,044,583	-		AO353_22965	0.58	+1.1
5,044,622	+		AO353_22965	0.61	-1.5
5,044,623	-		AO353_22965	0.61	+0.4
5,044,623	-		AO353_22965	0.61	-1.4
5,044,630	+		AO353_22965	0.62	-0.0
5,044,630	+		AO353_22965	0.62	-1.0
5,044,630	+		AO353_22965	0.62	+1.3
5,044,630	+		AO353_22965	0.62	-1.2
5,044,631	-		AO353_22965	0.62	-1.5
5,044,631	-		AO353_22965	0.62	-0.5
5,044,631	-		AO353_22965	0.62	-0.1
5,044,631	-		AO353_22965	0.62	-0.2
5,044,862	+		AO353_22965	0.80	-0.3
5,044,862	+		AO353_22965	0.80	+0.8
5,045,116	+				+0.9
5,045,116	+				+0.5
5,045,116	+				+0.5
5,045,116	+				+1.1
5,045,117	-				-0.1
5,045,117	-				+1.4
5,045,117	-				+0.2
5,045,125	+				-0.8
5,045,125	+				+0.1
5,045,126	-				+0.7
5,045,126	-				+1.4
5,045,126	-				-0.9
5,045,170	-				-0.5
5,045,204	+				-0.7
5,045,204	+				-0.3
5,045,204	+				+1.7
5,045,204	+				+0.3
5,045,204	+				+0.1
5,045,204	+				+0.6
5,045,204	+				+0.1
5,045,204	+				+0.9
5,045,204	+				-1.0
5,045,205	-				-1.1
5,045,205	-				-0.2
5,045,205	-				+1.2
5,045,205	-				+1.0
5,045,213	+				+1.2
5,045,213	+				+0.4
5,045,213	+				-0.5
5,045,214	-				-1.9
5,045,214	-				+1.7
5,045,214	-				+0.4
5,045,214	-				-0.4
5,045,288	+		AO353_22970	0.11	+0.4
5,045,288	+		AO353_22970	0.11	+0.9
5,045,289	-		AO353_22970	0.11	-1.6
5,045,289	-		AO353_22970	0.11	-0.3
5,045,289	-		AO353_22970	0.11	-1.5
5,045,387	+		AO353_22970	0.23	+0.4
5,045,447	+		AO353_22970	0.30	+2.2
5,045,448	-		AO353_22970	0.30	-0.9
5,045,448	-		AO353_22970	0.30	+0.4
5,045,448	-		AO353_22970	0.30	-0.6
5,045,448	-		AO353_22970	0.30	-0.6
5,045,507	+		AO353_22970	0.38	-2.1
5,045,507	+		AO353_22970	0.38	-0.2
5,045,508	-		AO353_22970	0.38	-0.8
5,045,508	-		AO353_22970	0.38	-0.8
5,045,523	+		AO353_22970	0.40	-1.8
5,045,544	-		AO353_22970	0.42	-0.5
5,045,544	-		AO353_22970	0.42	+0.3
5,045,544	-		AO353_22970	0.42	-0.5
5,045,544	-		AO353_22970	0.42	+0.4
5,045,627	+		AO353_22970	0.53	-0.5
5,045,627	+		AO353_22970	0.53	+0.5
5,045,627	+		AO353_22970	0.53	-0.5
5,045,628	-		AO353_22970	0.53	+0.4
5,045,634	+		AO353_22970	0.54	-0.5
5,045,635	-		AO353_22970	0.54	+0.4
5,045,741	+		AO353_22970	0.67	-0.1
5,045,741	+		AO353_22970	0.67	-0.7
5,045,741	+		AO353_22970	0.67	+1.2
5,045,741	+		AO353_22970	0.67	-0.1
5,045,741	+		AO353_22970	0.67	+0.1
5,045,741	+		AO353_22970	0.67	-2.1
5,045,741	+		AO353_22970	0.67	+0.3
5,045,742	-		AO353_22970	0.67	+0.2
5,045,742	-		AO353_22970	0.67	+0.3
5,045,742	-		AO353_22970	0.67	-0.3
5,045,742	-		AO353_22970	0.67	-0.9
5,045,742	-		AO353_22970	0.67	-0.1
5,045,742	-		AO353_22970	0.67	-1.3
5,045,742	-		AO353_22970	0.67	+0.2
5,045,742	-		AO353_22970	0.67	-1.8
5,045,742	-		AO353_22970	0.67	-0.8
5,045,742	-		AO353_22970	0.67	-1.5
5,045,814	-		AO353_22970	0.76	+0.3
5,045,814	-		AO353_22970	0.76	+0.7
5,045,873	+		AO353_22970	0.83	+1.0
5,045,874	-		AO353_22970	0.83	-0.5
5,045,909	+		AO353_22970	0.88	+0.8
5,045,909	+		AO353_22970	0.88	-0.9
5,045,909	+		AO353_22970	0.88	-1.9
5,045,910	-		AO353_22970	0.88	-0.3
5,045,910	-		AO353_22970	0.88	-0.3
5,045,933	+				-0.3
5,045,933	+				-0.1
5,045,934	-				+1.3
5,046,025	+				-0.5
5,046,042	-				+1.0