Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18290

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
4,031,257	+		AO353_18280	0.57	-0.5
4,031,257	+		AO353_18280	0.57	-1.2
4,031,257	+		AO353_18280	0.57	+0.0
4,031,257	+		AO353_18280	0.57	-0.3
4,031,257	+				-0.4
4,031,257	+		AO353_18280	0.57	+0.3
4,031,258	-		AO353_18280	0.57	+0.9
4,031,258	-		AO353_18280	0.57	-1.6
4,031,258	-				-0.1
4,031,258	-		AO353_18280	0.57	+0.7
4,031,258	-		AO353_18280	0.57	+1.4
4,031,258	-		AO353_18280	0.57	-0.9
4,031,258	-		AO353_18280	0.57	-2.4
4,031,258	-		AO353_18280	0.57	+1.1
4,031,258	-		AO353_18280	0.57	+0.4
4,031,258	-		AO353_18280	0.57	+0.5
4,031,388	+		AO353_18280	0.71	-0.6
4,031,388	+		AO353_18280	0.71	-0.2
4,031,389	-		AO353_18280	0.71	+0.9
4,031,407	+		AO353_18280	0.73	+0.2
4,031,408	-		AO353_18280	0.73	+1.7
4,031,408	-		AO353_18280	0.73	-1.1
4,031,408	-		AO353_18280	0.73	+0.8
4,031,539	-		AO353_18280	0.87	+0.3
4,031,539	-		AO353_18280	0.87	+0.8
4,031,540	+		AO353_18280	0.87	-0.7
4,031,540	+		AO353_18280	0.87	+0.5
4,031,540	+		AO353_18280	0.87	+0.4
4,031,540	+		AO353_18280	0.87	-0.1
4,031,540	+				+0.4
4,031,540	+		AO353_18280	0.87	-1.0
4,031,540	+		AO353_18280	0.87	-0.5
4,031,540	+				+0.4
4,031,540	+		AO353_18280	0.87	+1.8
4,031,541	-		AO353_18280	0.88	+0.0
4,031,541	-		AO353_18280	0.88	-1.1
4,031,541	-		AO353_18280	0.88	-1.0
4,031,541	-		AO353_18280	0.88	+1.1
4,031,541	-		AO353_18280	0.88	+0.4
4,031,541	-		AO353_18280	0.88	-1.0
4,031,614	+				-0.2
4,031,614	+				+0.4
4,031,614	+				+0.4
4,031,614	+				-1.0
4,031,614	+				+0.2
4,031,614	+				-0.8
4,031,615	-				+1.4
4,031,615	-				-1.4
4,031,674	+				-0.1
4,031,674	+				-0.2
4,031,674	+				-0.2
4,031,674	+				+1.3
4,031,675	-				-0.3
4,031,772	+		AO353_18285	0.21	+2.4
4,031,772	+		AO353_18285	0.21	-0.5
4,031,773	-		AO353_18285	0.22	-2.1
4,031,804	+		AO353_18285	0.31	+0.7
4,031,805	-		AO353_18285	0.32	-0.2
4,031,843	-		AO353_18285	0.44	-1.4
4,031,843	-		AO353_18285	0.44	-1.9
4,031,915	-		AO353_18285	0.67	-1.9
4,031,990	+				+0.3
4,031,990	+				-0.6
4,031,990	+				-1.1
4,031,990	+				-0.1
4,031,990	+				+0.3
4,031,990	+				-0.3
4,031,990	+				-0.9
4,031,990	+				-2.3
4,031,990	+				-0.9
4,031,991	-				-0.1
4,031,991	-				-1.7
4,031,991	-				-0.9
4,031,991	-				-0.6
4,031,991	-				+0.6
4,031,991	-				-1.1
4,031,991	-				-1.9
4,031,991	-				-3.0
4,031,991	-				+1.9
4,031,991	-				-0.2
4,032,017	+				-0.1
4,032,018	-				-0.6
4,032,018	-				-2.1
4,032,043	+				+0.1
4,032,043	+				+0.5
4,032,043	+				-0.1
4,032,044	-				-1.0
4,032,044	-				-2.2
4,032,044	-				-0.9
4,032,044	-				-1.4
4,032,044	-				-2.1
4,032,044	-				-1.1
4,032,087	-				-1.1
4,032,087	-				-0.8
4,032,087	-				-0.9
4,032,087	-				-1.9
4,032,119	-				-0.1
4,032,138	+				+0.1
4,032,138	+				+0.4
4,032,138	+				+1.5
4,032,138	+				-0.2
4,032,138	+				+0.8
4,032,138	+				+0.1
4,032,139	-				-0.2
4,032,139	-				+0.4
4,032,139	-				-1.5
4,032,139	-				-2.8
4,032,160	+				+0.4
4,032,160	+				+0.6
4,032,160	+				-0.5
4,032,160	+				-0.2
4,032,160	+				+0.9
4,032,160	+				-0.3
4,032,160	+				-0.1
4,032,160	+				+0.9
4,032,160	+				-1.2
4,032,161	-				-2.1
4,032,161	-				-1.1
4,032,161	-				-0.5
4,032,161	-				-0.9
4,032,161	-				+1.4
4,032,161	-				-1.1
4,032,161	-				-1.8
4,032,456	+		AO353_18290	0.48	-0.6
4,032,456	+		AO353_18290	0.48	-1.4
4,032,457	-		AO353_18290	0.48	+0.7
4,032,457	-		AO353_18290	0.48	+0.4
4,032,457	-		AO353_18290	0.48	-0.6
4,032,457	-		AO353_18290	0.48	-1.4
4,032,457	-		AO353_18290	0.48	-0.8
4,032,528	+		AO353_18290	0.60	-0.6
4,032,528	+		AO353_18290	0.60	+1.2
4,032,528	+		AO353_18290	0.60	-2.6
4,032,528	+		AO353_18290	0.60	-0.8
4,032,528	+		AO353_18290	0.60	+0.8
4,032,529	-				-0.4
4,032,529	-		AO353_18290	0.60	-0.1
4,032,529	-		AO353_18290	0.60	-0.9
4,032,529	-		AO353_18290	0.60	-1.6
4,032,573	+		AO353_18290	0.68	-0.6
4,032,573	+		AO353_18290	0.68	-0.7
4,032,573	+		AO353_18290	0.68	-0.2
4,032,573	+		AO353_18290	0.68	+0.1
4,032,573	+		AO353_18290	0.68	-0.3
4,032,573	+		AO353_18290	0.68	-0.4
4,032,573	+		AO353_18290	0.68	-1.6
4,032,573	+		AO353_18290	0.68	-2.8
4,032,573	+		AO353_18290	0.68	-0.1
4,032,573	+		AO353_18290	0.68	-0.1
4,032,573	+		AO353_18290	0.68	-1.7
4,032,573	+		AO353_18290	0.68	+1.2
4,032,573	+		AO353_18290	0.68	-1.1
4,032,573	+		AO353_18290	0.68	+0.6
4,032,573	+		AO353_18290	0.68	-0.8
4,032,573	+		AO353_18290	0.68	-0.5
4,032,573	+		AO353_18290	0.68	+1.1
4,032,574	-		AO353_18290	0.68	-2.8
4,032,574	-		AO353_18290	0.68	-0.9
4,032,574	-		AO353_18290	0.68	-2.1
4,032,574	-		AO353_18290	0.68	-0.5
4,032,574	-		AO353_18290	0.68	+0.1
4,032,574	-		AO353_18290	0.68	-0.6
4,032,574	-		AO353_18290	0.68	-0.5
4,032,574	-		AO353_18290	0.68	-0.6
4,032,574	-		AO353_18290	0.68	-1.1
4,032,574	-		AO353_18290	0.68	-0.3
4,032,574	-		AO353_18290	0.68	-1.6
4,032,600	+		AO353_18290	0.72	-0.6
4,032,600	+		AO353_18290	0.72	-0.2
4,032,601	-		AO353_18290	0.72	-1.3
4,032,601	-		AO353_18290	0.72	-1.4
4,032,601	-		AO353_18290	0.72	+0.2
4,032,601	-		AO353_18290	0.72	+1.4
4,032,633	+		AO353_18290	0.78	-0.5
4,032,633	+		AO353_18290	0.78	-0.1
4,032,634	-		AO353_18290	0.78	-1.9
4,032,680	+		AO353_18290	0.85	-0.6
4,032,680	+		AO353_18290	0.85	-1.1
4,032,680	+		AO353_18290	0.85	-1.2
4,032,680	+		AO353_18290	0.85	-1.0
4,032,681	-		AO353_18290	0.85	-2.8
4,032,681	-		AO353_18290	0.85	-0.9
4,032,681	-		AO353_18290	0.85	-2.1
4,032,681	-		AO353_18290	0.85	+0.9
4,032,784	+				+0.3
4,032,784	+				-0.6
4,032,799	+				-1.0
4,032,799	+				+0.8
4,032,799	+				-0.1
4,032,799	+				-1.8
4,032,799	+				+0.1
4,032,799	+				+0.4
4,032,799	+				+0.9
4,032,800	-				-1.1
4,032,800	-				-0.2
4,032,800	-				-1.8
4,032,800	-				-2.1
4,032,800	-				-0.5
4,032,800	-				+0.1
4,032,800	-				-1.4
4,032,800	-				-0.9
4,032,803	+				+0.2
4,032,803	+				+0.9
4,032,803	+				-0.1
4,032,803	+				-0.3
4,032,804	-				-2.6
4,032,804	-				+0.5
4,032,804	-				-1.2
4,032,804	-				-1.4
4,032,804	-				-1.1
4,032,929	+				+0.8
4,032,930	-				-0.5
4,032,930	-				-1.1
4,033,003	+				-0.9
4,033,004	-				-1.6
4,033,004	-				-1.8
4,033,007	+				-0.4
4,033,007	+				+0.8
4,033,008	-				+0.5
4,033,008	-				-0.2
4,033,057	+				+0.4
4,033,057	+				-0.4
4,033,058	-				-1.4
4,033,058	-				+0.4
4,033,058	-				+0.1
4,033,058	-				+0.6
4,033,058	-				-0.1
4,033,081	+				-1.3
4,033,081	+				-0.7
4,033,081	+				+0.2
4,033,081	+				+0.6
4,033,081	+				-1.5
4,033,081	+				-0.2
4,033,082	-				-0.4
4,033,082	-				-1.7
4,033,082	-				-0.7
4,033,082	-				-1.1
4,033,210	+		AO353_18295	0.24	+0.1
4,033,210	+		AO353_18295	0.24	-1.2
4,033,210	+		AO353_18295	0.24	+0.9
4,033,210	+		AO353_18295	0.24	-0.7
4,033,210	+		AO353_18295	0.24	-0.3
4,033,210	+		AO353_18295	0.24	-0.1
4,033,210	+		AO353_18295	0.24	+0.9
4,033,210	+		AO353_18295	0.24	+0.5
4,033,210	+		AO353_18295	0.24	-1.8
4,033,210	+		AO353_18295	0.24	+1.1
4,033,211	-		AO353_18295	0.25	+0.1
4,033,211	-		AO353_18295	0.25	-2.0
4,033,211	-		AO353_18295	0.25	-1.5
4,033,211	-		AO353_18295	0.25	+0.6
4,033,211	-		AO353_18295	0.25	-0.2
4,033,222	+		AO353_18295	0.26	+0.5
4,033,222	+		AO353_18295	0.26	+0.7
4,033,223	-		AO353_18295	0.26	-0.5
4,033,445	-		AO353_18295	0.51	-0.1
4,033,445	-		AO353_18295	0.51	-2.1
4,033,445	-		AO353_18295	0.51	-0.8
4,033,465	+		AO353_18295	0.54	-0.8
4,033,465	+		AO353_18295	0.54	-1.4
4,033,465	+		AO353_18295	0.54	-0.9
4,033,465	+		AO353_18295	0.54	-1.6
4,033,466	-		AO353_18295	0.54	-2.2
4,033,466	-		AO353_18295	0.54	-1.3
4,033,466	-		AO353_18295	0.54	-1.1
4,033,529	-		AO353_18295	0.61	-0.5
4,033,658	-		AO353_18295	0.76	-1.1