Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12305

Experiment: D-Ribose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Ribose (C)
2,706,241	+				+0.6
2,706,267	-				+0.7
2,706,284	+				+1.2
2,706,284	+				+0.8
2,706,315	+				-0.3
2,706,315	+				+0.3
2,706,315	+				-0.7
2,706,315	+				-0.7
2,706,315	+				+0.1
2,706,315	+				-1.7
2,706,315	+				+1.0
2,706,316	-				+0.0
2,706,316	-				+0.8
2,706,316	-				+0.4
2,706,316	-				+0.8
2,706,316	-				+0.3
2,706,326	+				+0.5
2,706,326	+				+0.6
2,706,326	+				+0.6
2,706,326	+				-0.1
2,706,327	-				+1.8
2,706,417	-		AO353_12300	0.17	-0.5
2,706,445	+		AO353_12300	0.20	-0.8
2,706,446	-		AO353_12300	0.20	+0.4
2,706,446	-		AO353_12300	0.20	+0.9
2,706,608	+		AO353_12300	0.36	-0.5
2,706,608	+		AO353_12300	0.36	-1.2
2,706,692	+		AO353_12300	0.45	-0.6
2,706,692	+		AO353_12300	0.45	+0.4
2,706,692	+		AO353_12300	0.45	-0.0
2,706,693	-		AO353_12300	0.45	+0.3
2,706,693	-		AO353_12300	0.45	+1.3
2,706,693	-		AO353_12300	0.45	-1.6
2,706,725	+		AO353_12300	0.48	-1.1
2,706,737	+		AO353_12300	0.50	+0.6
2,706,737	+		AO353_12300	0.50	+0.2
2,706,737	+		AO353_12300	0.50	+0.1
2,706,737	+		AO353_12300	0.50	+1.1
2,706,737	+		AO353_12300	0.50	+0.2
2,706,737	+		AO353_12300	0.50	+1.5
2,706,737	+		AO353_12300	0.50	+0.4
2,706,738	-		AO353_12300	0.50	-0.4
2,706,738	-		AO353_12300	0.50	+1.0
2,706,738	-		AO353_12300	0.50	+1.0
2,706,738	-		AO353_12300	0.50	-0.5
2,706,738	-		AO353_12300	0.50	+0.8
2,706,738	-		AO353_12300	0.50	+2.2
2,706,738	-		AO353_12300	0.50	+0.5
2,706,738	-		AO353_12300	0.50	-0.6
2,706,738	-		AO353_12300	0.50	-0.2
2,706,868	+		AO353_12300	0.63	-0.2
2,706,950	+		AO353_12300	0.72	-1.5
2,706,950	+		AO353_12300	0.72	-0.4
2,706,950	+		AO353_12300	0.72	-1.6
2,706,950	+		AO353_12300	0.72	-1.1
2,706,950	+		AO353_12300	0.72	-1.2
2,706,951	-		AO353_12300	0.72	+0.5
2,706,951	-		AO353_12300	0.72	-0.6
2,706,951	-		AO353_12300	0.72	+1.6
2,707,289	+		AO353_12305	0.15	-0.3
2,707,289	+		AO353_12305	0.15	-1.0
2,707,289	+		AO353_12305	0.15	-0.4
2,707,289	+		AO353_12305	0.15	+0.6
2,707,290	-		AO353_12305	0.16	+0.9
2,707,290	-		AO353_12305	0.16	+1.2
2,707,362	+		AO353_12305	0.32	-0.6
2,707,362	+		AO353_12305	0.32	-0.9
2,707,362	+		AO353_12305	0.32	-2.2
2,707,362	+		AO353_12305	0.32	-1.3
2,707,363	-		AO353_12305	0.32	+1.8
2,707,363	-		AO353_12305	0.32	+2.4
2,707,363	-		AO353_12305	0.32	+0.2
2,707,363	-		AO353_12305	0.32	+1.1
2,707,363	-		AO353_12305	0.32	+1.2
2,707,371	+		AO353_12305	0.34	-0.8
2,707,371	+		AO353_12305	0.34	-0.4
2,707,371	+		AO353_12305	0.34	-0.6
2,707,371	+		AO353_12305	0.34	-0.6
2,707,371	+		AO353_12305	0.34	-0.8
2,707,371	+		AO353_12305	0.34	-1.4
2,707,371	+		AO353_12305	0.34	-0.5
2,707,371	+		AO353_12305	0.34	-0.5
2,707,371	+		AO353_12305	0.34	-3.0
2,707,371	+		AO353_12305	0.34	+0.0
2,707,372	-		AO353_12305	0.34	+1.8
2,707,372	-		AO353_12305	0.34	+0.6
2,707,372	-		AO353_12305	0.34	+1.0
2,707,372	-		AO353_12305	0.34	+0.4
2,707,372	-		AO353_12305	0.34	+2.4
2,707,372	-		AO353_12305	0.34	+1.2
2,707,375	+		AO353_12305	0.35	-0.9
2,707,375	+		AO353_12305	0.35	-1.3
2,707,375	+		AO353_12305	0.35	-1.8
2,707,503	+		AO353_12305	0.64	-1.3
2,707,503	+		AO353_12305	0.64	+0.2
2,707,504	-		AO353_12305	0.64	+1.5
2,707,504	-		AO353_12305	0.64	+0.6
2,707,543	+		AO353_12305	0.73	-1.9
2,707,543	+		AO353_12305	0.73	+2.4
2,707,543	+		AO353_12305	0.73	-1.0
2,707,544	-		AO353_12305	0.74	+1.6
2,707,545	+		AO353_12305	0.74	-1.3
2,707,545	+		AO353_12305	0.74	+0.4
2,707,545	+		AO353_12305	0.74	-1.8
2,707,545	+		AO353_12305	0.74	-1.3
2,707,545	+		AO353_12305	0.74	-1.9
2,707,545	+		AO353_12305	0.74	-1.0
2,707,545	+		AO353_12305	0.74	-2.2
2,707,545	+		AO353_12305	0.74	-0.8
2,707,546	-		AO353_12305	0.74	+0.6
2,707,546	-		AO353_12305	0.74	+2.5
2,707,546	-		AO353_12305	0.74	+1.9
2,707,546	-		AO353_12305	0.74	+1.4
2,707,546	-		AO353_12305	0.74	+2.5
2,707,546	-		AO353_12305	0.74	+1.9
2,707,546	-		AO353_12305	0.74	+1.7
2,707,546	-		AO353_12305	0.74	+1.9
2,707,546	-		AO353_12305	0.74	+1.2
2,707,546	-		AO353_12305	0.74	+2.3
2,707,546	-		AO353_12305	0.74	+2.4
2,707,546	-		AO353_12305	0.74	+1.5
2,707,546	-		AO353_12305	0.74	+2.1
2,707,546	-		AO353_12305	0.74	+2.3
2,707,547	+		AO353_12305	0.74	-1.2
2,707,547	+		AO353_12305	0.74	-2.1
2,707,547	+		AO353_12305	0.74	-2.2
2,707,547	+		AO353_12305	0.74	-0.9
2,707,547	+		AO353_12305	0.74	+0.4
2,707,547	+		AO353_12305	0.74	-1.8
2,707,547	+		AO353_12305	0.74	-2.7
2,707,547	+		AO353_12305	0.74	-0.5
2,707,547	+		AO353_12305	0.74	-0.6
2,707,547	+		AO353_12305	0.74	-1.0
2,707,548	-		AO353_12305	0.74	+1.8
2,707,548	-		AO353_12305	0.74	+3.4
2,707,548	-		AO353_12305	0.74	+2.5
2,707,548	-		AO353_12305	0.74	+1.8
2,707,548	-		AO353_12305	0.74	+2.2
2,707,548	-		AO353_12305	0.74	+1.8
2,707,548	-		AO353_12305	0.74	+2.3
2,707,548	-		AO353_12305	0.74	+0.6
2,707,548	-		AO353_12305	0.74	+1.9
2,707,548	-		AO353_12305	0.74	+2.7
2,707,548	-		AO353_12305	0.74	+1.3
2,707,548	-		AO353_12305	0.74	+1.5
2,707,548	-		AO353_12305	0.74	+2.2
2,707,548	-		AO353_12305	0.74	+2.2
2,707,568	+		AO353_12305	0.79	-1.2
2,707,568	+		AO353_12305	0.79	-1.2
2,707,569	-		AO353_12305	0.79	+1.4
2,707,569	-		AO353_12305	0.79	+1.6
2,707,590	+		AO353_12305	0.84	-0.7
2,707,590	+		AO353_12305	0.84	-2.7
2,707,591	-		AO353_12305	0.84	+1.8
2,707,649	+				-0.6
2,707,649	+				-2.6
2,707,721	+				-0.9
2,707,721	+				-2.2
2,707,721	+				-1.1
2,707,721	+				-1.7
2,707,721	+				-1.5
2,707,721	+				-0.8
2,707,721	+				+0.2
2,707,721	+				-1.1
2,707,722	-				+2.6
2,707,722	-				+3.1
2,707,722	-				+2.3
2,707,722	-				+2.5
2,707,730	-				+1.6
2,707,745	+				-2.4
2,707,745	+				-1.8
2,707,746	-				+2.0
2,707,755	+				-3.6
2,707,755	+				-0.6
2,707,756	-				+2.9
2,707,758	+				-1.7
2,707,758	+				-1.6
2,707,758	+				+0.4
2,707,758	+				-0.7
2,707,758	+				-1.0
2,707,758	+				-1.2
2,707,758	+				-1.0
2,707,759	-				+2.3
2,707,759	-				+3.3
2,707,759	-				+2.6
2,707,759	-				+2.4
2,707,759	-				+2.0
2,707,759	-				+2.0
2,707,762	+				-1.0
2,707,762	+				-3.4
2,707,762	+				-0.7
2,707,762	+				-1.7
2,707,763	-				+2.1
2,707,763	-				+2.2
2,707,763	-				+3.0
2,707,808	+				-1.3
2,707,808	+				-0.6
2,707,808	+				+0.2
2,707,808	+				-1.0
2,707,808	+				-0.3
2,707,808	+				-2.0
2,707,809	-				+2.7
2,707,809	-				+2.3
2,707,809	-				+1.1
2,707,809	-				+2.2
2,707,809	-				+2.5
2,707,809	-				+2.9
2,707,809	-				+1.4
2,707,812	+				-0.6
2,707,812	+				-0.1
2,707,813	-				+2.7
2,707,846	+				-1.9
2,707,847	-				+2.4
2,707,847	-				+2.0
2,707,897	+				-2.6
2,707,897	+				+0.3
2,707,897	+				-0.0
2,707,897	+				-0.7
2,707,897	+				+0.9
2,707,897	+				-2.0
2,707,898	-				+1.5
2,707,898	-				+2.5
2,707,898	-				+2.4
2,707,918	+				+0.3
2,707,918	+				-1.7
2,707,918	+				+0.8
2,707,918	+				-1.2
2,707,919	-				+2.0
2,707,919	-				+2.7
2,707,964	+				+1.7
2,707,964	+				+3.0
2,707,995	+				+1.8
2,707,995	+				+0.4
2,707,995	+				+1.6
2,707,996	-				+1.9
2,707,996	-				+2.3
2,707,996	-				+1.4
2,708,018	+				+0.4
2,708,018	+				-0.8
2,708,018	+				-1.5
2,708,018	+				+0.2
2,708,018	+				-0.3
2,708,018	+				-1.5
2,708,018	+				+0.7
2,708,018	+				-2.0
2,708,019	-				+2.8
2,708,019	-				+3.0
2,708,019	-				+2.6
2,708,019	-				+1.1
2,708,019	-				+2.3
2,708,019	-				+2.6
2,708,019	-				+2.8
2,708,019	-				+2.3
2,708,019	-				+2.2
2,708,019	-				+2.4
2,708,019	-				+2.4
2,708,019	-				+1.1
2,708,019	-				+2.9
2,708,049	+				-0.1
2,708,103	+				+1.4
2,708,103	+				+1.7
2,708,112	+				+1.8
2,708,112	+				+2.3
2,708,113	-				+2.5
2,708,257	+				+2.6
2,708,257	+				+3.7
2,708,257	+				+1.7
2,708,258	-				+3.5
2,708,258	-				+2.4
2,708,258	-				+1.9
2,708,314	+		AO353_12310	0.12	+2.4
2,708,386	+		AO353_12310	0.16	+2.5
2,708,386	+		AO353_12310	0.16	+3.0
2,708,386	+		AO353_12310	0.16	+2.4
2,708,386	+		AO353_12310	0.16	+3.2
2,708,386	+		AO353_12310	0.16	+2.0
2,708,386	+		AO353_12310	0.16	+3.1
2,708,387	-		AO353_12310	0.16	+3.0
2,708,387	-		AO353_12310	0.16	+2.1
2,708,387	-		AO353_12310	0.16	+2.3
2,708,387	-		AO353_12310	0.16	+2.1
2,708,387	-		AO353_12310	0.16	+2.2
2,708,387	-		AO353_12310	0.16	+2.8
2,708,387	-		AO353_12310	0.16	+2.1
2,708,387	-		AO353_12310	0.16	+1.3
2,708,461	+		AO353_12310	0.21	+2.0
2,708,461	+		AO353_12310	0.21	+2.0
2,708,461	+		AO353_12310	0.21	+2.9
2,708,461	+		AO353_12310	0.21	+1.7
2,708,462	-		AO353_12310	0.21	+0.6
2,708,462	-		AO353_12310	0.21	+2.7
2,708,462	-		AO353_12310	0.21	+4.3
2,708,462	-		AO353_12310	0.21	+2.6
2,708,506	-		AO353_12310	0.23	+3.1
2,708,506	-		AO353_12310	0.23	+2.4
2,708,506	-		AO353_12310	0.23	+2.5
2,708,506	-		AO353_12310	0.23	+2.4
2,708,506	-		AO353_12310	0.23	+2.1
2,708,506	-		AO353_12310	0.23	+3.2
2,708,506	-		AO353_12310	0.23	+3.1
2,708,527	+		AO353_12310	0.24	+2.2
2,708,527	+		AO353_12310	0.24	+1.5
2,708,528	-		AO353_12310	0.24	+1.6
2,708,605	+		AO353_12310	0.29	+2.5
2,708,605	+		AO353_12310	0.29	+1.8
2,708,605	+		AO353_12310	0.29	+2.6
2,708,605	+		AO353_12310	0.29	+1.2
2,708,605	+		AO353_12310	0.29	+2.8
2,708,605	+		AO353_12310	0.29	+2.8
2,708,606	-		AO353_12310	0.29	+2.5
2,708,606	-		AO353_12310	0.29	+2.3
2,708,635	+		AO353_12310	0.30	+2.6
2,708,635	+		AO353_12310	0.30	+2.5
2,708,635	+		AO353_12310	0.30	+2.6
2,708,635	+		AO353_12310	0.30	+1.6
2,708,635	+		AO353_12310	0.30	+2.8
2,708,635	+		AO353_12310	0.30	+2.0
2,708,636	-		AO353_12310	0.30	+1.9
2,708,636	-		AO353_12310	0.30	+3.0
2,708,636	-		AO353_12310	0.30	+2.8
2,708,636	-		AO353_12310	0.30	+2.4
2,708,636	-		AO353_12310	0.30	+2.1
2,708,636	-		AO353_12310	0.30	+2.9
2,708,636	-		AO353_12310	0.30	+2.0
2,708,636	-		AO353_12310	0.30	+2.1
2,708,636	-		AO353_12310	0.30	+1.2
2,708,636	-		AO353_12310	0.30	+1.8
2,708,636	-		AO353_12310	0.30	+1.4
2,708,636	-		AO353_12310	0.30	+2.7
2,708,636	-		AO353_12310	0.30	+2.9
2,708,636	-		AO353_12310	0.30	+2.6
2,708,636	-		AO353_12310	0.30	+2.5
2,708,636	-		AO353_12310	0.30	+3.4