Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS02505 and ABIE51_RS02510 are separated by 8 nucleotides ABIE51_RS02510 and ABIE51_RS02515 overlap by 4 nucleotides ABIE51_RS02515 and ABIE51_RS02520 overlap by 1 nucleotides
ABIE51_RS02505: ABIE51_RS02505 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 554,630 to 555,688
_RS02505
ABIE51_RS02510: ABIE51_RS02510 - DUF1295 domain-containing protein, at 555,697 to 556,476
_RS02510
ABIE51_RS02515: ABIE51_RS02515 - DUF2878 domain-containing protein, at 556,473 to 557,009
_RS02515
ABIE51_RS02520: ABIE51_RS02520 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 557,009 to 558,280
_RS02520
Position (kb) 556
557
558 Strain fitness (log2 ratio) -2
-1
0
1 at 555.795 kb on + strand, within ABIE51_RS02510 at 555.830 kb on + strand, within ABIE51_RS02510 at 555.830 kb on + strand, within ABIE51_RS02510 at 555.830 kb on + strand, within ABIE51_RS02510 at 555.831 kb on - strand, within ABIE51_RS02510 at 555.831 kb on - strand, within ABIE51_RS02510 at 555.831 kb on - strand, within ABIE51_RS02510 at 555.831 kb on - strand, within ABIE51_RS02510 at 555.893 kb on + strand, within ABIE51_RS02510 at 555.893 kb on + strand, within ABIE51_RS02510 at 555.893 kb on + strand, within ABIE51_RS02510 at 555.923 kb on + strand, within ABIE51_RS02510 at 555.923 kb on + strand, within ABIE51_RS02510 at 556.639 kb on + strand, within ABIE51_RS02515 at 556.639 kb on + strand, within ABIE51_RS02515 at 556.773 kb on - strand, within ABIE51_RS02515 at 556.821 kb on + strand, within ABIE51_RS02515 at 557.508 kb on + strand, within ABIE51_RS02520 at 557.509 kb on - strand, within ABIE51_RS02520 at 557.509 kb on - strand, within ABIE51_RS02520 at 557.598 kb on + strand, within ABIE51_RS02520 at 557.799 kb on + strand, within ABIE51_RS02520 at 557.799 kb on + strand, within ABIE51_RS02520 at 557.850 kb on + strand, within ABIE51_RS02520 at 557.850 kb on + strand, within ABIE51_RS02520 at 557.850 kb on + strand, within ABIE51_RS02520 at 557.850 kb on + strand, within ABIE51_RS02520 at 557.851 kb on - strand, within ABIE51_RS02520 at 557.851 kb on - strand, within ABIE51_RS02520 at 557.851 kb on - strand, within ABIE51_RS02520 at 557.979 kb on - strand, within ABIE51_RS02520
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 555,795 + ABIE51_RS02510 0.13 -0.2 555,830 + ABIE51_RS02510 0.17 +0.6 555,830 + ABIE51_RS02510 0.17 +0.7 555,830 + ABIE51_RS02510 0.17 +1.0 555,831 - ABIE51_RS02510 0.17 -2.7 555,831 - ABIE51_RS02510 0.17 +0.5 555,831 - ABIE51_RS02510 0.17 +0.2 555,831 - ABIE51_RS02510 0.17 -1.4 555,893 + ABIE51_RS02510 0.25 +0.6 555,893 + ABIE51_RS02510 0.25 +0.6 555,893 + ABIE51_RS02510 0.25 +0.5 555,923 + ABIE51_RS02510 0.29 +0.3 555,923 + ABIE51_RS02510 0.29 -0.1 556,639 + ABIE51_RS02515 0.31 -0.3 556,639 + ABIE51_RS02515 0.31 -0.8 556,773 - ABIE51_RS02515 0.56 +0.1 556,821 + ABIE51_RS02515 0.65 -1.1 557,508 + ABIE51_RS02520 0.39 -0.2 557,509 - ABIE51_RS02520 0.39 -0.1 557,509 - ABIE51_RS02520 0.39 -0.1 557,598 + ABIE51_RS02520 0.46 +0.3 557,799 + ABIE51_RS02520 0.62 -0.1 557,799 + ABIE51_RS02520 0.62 -0.3 557,850 + ABIE51_RS02520 0.66 -0.5 557,850 + ABIE51_RS02520 0.66 -0.1 557,850 + ABIE51_RS02520 0.66 -0.7 557,850 + ABIE51_RS02520 0.66 +1.0 557,851 - ABIE51_RS02520 0.66 +0.8 557,851 - ABIE51_RS02520 0.66 -1.9 557,851 - ABIE51_RS02520 0.66 +0.1 557,979 - ABIE51_RS02520 0.76 -0.5
Or see this region's nucleotide sequence