Strain Fitness in Lysobacter sp. OAE881 around ABIE51_RS02510

Experiment: pyruvate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE51_RS02505 and ABIE51_RS02510 are separated by 8 nucleotidesABIE51_RS02510 and ABIE51_RS02515 overlap by 4 nucleotidesABIE51_RS02515 and ABIE51_RS02520 overlap by 1 nucleotides ABIE51_RS02505: ABIE51_RS02505 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 554,630 to 555,688 _RS02505 ABIE51_RS02510: ABIE51_RS02510 - DUF1295 domain-containing protein, at 555,697 to 556,476 _RS02510 ABIE51_RS02515: ABIE51_RS02515 - DUF2878 domain-containing protein, at 556,473 to 557,009 _RS02515 ABIE51_RS02520: ABIE51_RS02520 - cyclopropane-fatty-acyl-phospholipid synthase family protein, at 557,009 to 558,280 _RS02520 Position (kb) 555 556 557Strain fitness (log2 ratio) -2 -1 0 1at 554.757 kb on + strand, within ABIE51_RS02505at 554.758 kb on - strand, within ABIE51_RS02505at 554.835 kb on + strand, within ABIE51_RS02505at 554.976 kb on + strand, within ABIE51_RS02505at 554.976 kb on + strand, within ABIE51_RS02505at 554.986 kb on + strand, within ABIE51_RS02505at 555.064 kb on - strand, within ABIE51_RS02505at 555.339 kb on + strand, within ABIE51_RS02505at 555.340 kb on - strand, within ABIE51_RS02505at 555.394 kb on - strand, within ABIE51_RS02505at 555.396 kb on + strand, within ABIE51_RS02505at 555.396 kb on + strand, within ABIE51_RS02505at 555.397 kb on - strand, within ABIE51_RS02505at 555.397 kb on - strand, within ABIE51_RS02505at 555.397 kb on - strand, within ABIE51_RS02505at 555.408 kb on + strand, within ABIE51_RS02505at 555.408 kb on + strand, within ABIE51_RS02505at 555.409 kb on - strand, within ABIE51_RS02505at 555.459 kb on + strand, within ABIE51_RS02505at 555.460 kb on - strand, within ABIE51_RS02505at 555.795 kb on + strand, within ABIE51_RS02510at 555.830 kb on + strand, within ABIE51_RS02510at 555.830 kb on + strand, within ABIE51_RS02510at 555.830 kb on + strand, within ABIE51_RS02510at 555.831 kb on - strand, within ABIE51_RS02510at 555.831 kb on - strand, within ABIE51_RS02510at 555.831 kb on - strand, within ABIE51_RS02510at 555.831 kb on - strand, within ABIE51_RS02510at 555.893 kb on + strand, within ABIE51_RS02510at 555.893 kb on + strand, within ABIE51_RS02510at 555.893 kb on + strand, within ABIE51_RS02510at 555.923 kb on + strand, within ABIE51_RS02510at 555.923 kb on + strand, within ABIE51_RS02510at 556.639 kb on + strand, within ABIE51_RS02515at 556.639 kb on + strand, within ABIE51_RS02515at 556.773 kb on - strand, within ABIE51_RS02515at 556.821 kb on + strand, within ABIE51_RS02515

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Per-strain Table

Position Strand Gene LocusTag Fraction pyruvate (C)
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554,757 + ABIE51_RS02505 0.12 -0.7
554,758 - ABIE51_RS02505 0.12 +1.1
554,835 + ABIE51_RS02505 0.19 +0.0
554,976 + ABIE51_RS02505 0.33 -0.2
554,976 + ABIE51_RS02505 0.33 +0.8
554,986 + ABIE51_RS02505 0.34 +0.7
555,064 - ABIE51_RS02505 0.41 -0.3
555,339 + ABIE51_RS02505 0.67 +0.5
555,340 - ABIE51_RS02505 0.67 -0.3
555,394 - ABIE51_RS02505 0.72 -0.9
555,396 + ABIE51_RS02505 0.72 -2.1
555,396 + ABIE51_RS02505 0.72 +0.2
555,397 - ABIE51_RS02505 0.72 -0.6
555,397 - ABIE51_RS02505 0.72 -0.2
555,397 - ABIE51_RS02505 0.72 -0.6
555,408 + ABIE51_RS02505 0.73 -1.5
555,408 + ABIE51_RS02505 0.73 -0.0
555,409 - ABIE51_RS02505 0.74 -0.0
555,459 + ABIE51_RS02505 0.78 +0.5
555,460 - ABIE51_RS02505 0.78 -0.2
555,795 + ABIE51_RS02510 0.13 -0.2
555,830 + ABIE51_RS02510 0.17 +0.6
555,830 + ABIE51_RS02510 0.17 +0.7
555,830 + ABIE51_RS02510 0.17 +1.0
555,831 - ABIE51_RS02510 0.17 -2.7
555,831 - ABIE51_RS02510 0.17 +0.5
555,831 - ABIE51_RS02510 0.17 +0.2
555,831 - ABIE51_RS02510 0.17 -1.4
555,893 + ABIE51_RS02510 0.25 +0.6
555,893 + ABIE51_RS02510 0.25 +0.6
555,893 + ABIE51_RS02510 0.25 +0.5
555,923 + ABIE51_RS02510 0.29 +0.3
555,923 + ABIE51_RS02510 0.29 -0.1
556,639 + ABIE51_RS02515 0.31 -0.3
556,639 + ABIE51_RS02515 0.31 -0.8
556,773 - ABIE51_RS02515 0.56 +0.1
556,821 + ABIE51_RS02515 0.65 -1.1

Or see this region's nucleotide sequence