Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABIE51_RS02080 and ABIE51_RS02085 are separated by 139 nucleotides ABIE51_RS02085 and ABIE51_RS02090 overlap by 4 nucleotides ABIE51_RS02090 and ABIE51_RS02095 overlap by 4 nucleotides ABIE51_RS02095 and ABIE51_RS02100 overlap by 4 nucleotides
ABIE51_RS02080: ABIE51_RS02080 - ATP-dependent RNA helicase RhlB, at 466,033 to 467,763
_RS02080
ABIE51_RS02085: ABIE51_RS02085 - cell division ATP-binding protein FtsE, at 467,903 to 468,589
_RS02085
ABIE51_RS02090: ABIE51_RS02090 - permease-like cell division protein FtsX, at 468,586 to 469,539
_RS02090
ABIE51_RS02095: ABIE51_RS02095 - response regulator, at 469,536 to 470,375
_RS02095
ABIE51_RS02100: ABIE51_RS02100 - uracil-DNA glycosylase, at 470,372 to 471,091
_RS02100
Position (kb) 468
469
470 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 467.870 kb on + strand at 467.871 kb on - strand at 467.890 kb on + strand at 467.891 kb on - strand at 467.891 kb on - strand at 468.114 kb on + strand, within ABIE51_RS02085 at 468.114 kb on + strand, within ABIE51_RS02085 at 468.115 kb on - strand, within ABIE51_RS02085 at 468.115 kb on - strand, within ABIE51_RS02085 at 468.115 kb on - strand, within ABIE51_RS02085 at 468.400 kb on + strand, within ABIE51_RS02085 at 468.401 kb on - strand, within ABIE51_RS02085 at 468.401 kb on - strand, within ABIE51_RS02085 at 468.401 kb on - strand, within ABIE51_RS02085 at 468.401 kb on - strand, within ABIE51_RS02085 at 468.667 kb on + strand at 468.668 kb on - strand at 469.088 kb on + strand, within ABIE51_RS02090 at 469.088 kb on + strand, within ABIE51_RS02090 at 469.089 kb on - strand, within ABIE51_RS02090 at 469.089 kb on - strand, within ABIE51_RS02090 at 469.089 kb on - strand, within ABIE51_RS02090 at 469.089 kb on - strand, within ABIE51_RS02090 at 469.203 kb on + strand, within ABIE51_RS02090 at 469.203 kb on + strand, within ABIE51_RS02090 at 469.204 kb on - strand, within ABIE51_RS02090 at 469.204 kb on - strand, within ABIE51_RS02090 at 469.204 kb on - strand, within ABIE51_RS02090 at 469.298 kb on - strand, within ABIE51_RS02090 at 469.312 kb on + strand, within ABIE51_RS02090 at 469.312 kb on + strand, within ABIE51_RS02090 at 469.312 kb on + strand, within ABIE51_RS02090 at 469.312 kb on + strand, within ABIE51_RS02090 at 469.312 kb on + strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.313 kb on - strand, within ABIE51_RS02090 at 469.402 kb on + strand, within ABIE51_RS02090 at 469.402 kb on + strand, within ABIE51_RS02090 at 469.403 kb on - strand, within ABIE51_RS02090 at 469.403 kb on - strand, within ABIE51_RS02090 at 469.510 kb on + strand at 469.510 kb on + strand at 469.510 kb on + strand at 469.510 kb on + strand at 469.511 kb on - strand at 469.511 kb on - strand at 469.797 kb on + strand, within ABIE51_RS02095 at 469.797 kb on + strand, within ABIE51_RS02095 at 469.797 kb on + strand, within ABIE51_RS02095 at 469.797 kb on + strand, within ABIE51_RS02095 at 469.797 kb on + strand, within ABIE51_RS02095 at 469.797 kb on + strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.798 kb on - strand, within ABIE51_RS02095 at 469.875 kb on + strand, within ABIE51_RS02095 at 469.876 kb on - strand, within ABIE51_RS02095 at 469.926 kb on + strand, within ABIE51_RS02095 at 469.926 kb on + strand, within ABIE51_RS02095 at 469.926 kb on + strand, within ABIE51_RS02095 at 469.926 kb on + strand, within ABIE51_RS02095 at 469.927 kb on - strand, within ABIE51_RS02095 at 469.927 kb on - strand, within ABIE51_RS02095 at 469.927 kb on - strand, within ABIE51_RS02095 at 469.965 kb on + strand, within ABIE51_RS02095 at 469.966 kb on - strand, within ABIE51_RS02095 at 469.966 kb on - strand, within ABIE51_RS02095 at 470.127 kb on + strand, within ABIE51_RS02095 at 470.127 kb on + strand, within ABIE51_RS02095 at 470.128 kb on - strand, within ABIE51_RS02095 at 470.128 kb on - strand, within ABIE51_RS02095 at 470.128 kb on - strand, within ABIE51_RS02095 at 470.128 kb on - strand, within ABIE51_RS02095 at 470.441 kb on + strand at 470.441 kb on + strand at 470.441 kb on + strand at 470.441 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 467,870 + +0.2 467,871 - +1.3 467,890 + -0.6 467,891 - -0.8 467,891 - -0.1 468,114 + ABIE51_RS02085 0.31 -0.3 468,114 + ABIE51_RS02085 0.31 -0.4 468,115 - ABIE51_RS02085 0.31 +1.1 468,115 - ABIE51_RS02085 0.31 +0.7 468,115 - ABIE51_RS02085 0.31 -1.1 468,400 + ABIE51_RS02085 0.72 -0.4 468,401 - ABIE51_RS02085 0.72 -0.6 468,401 - ABIE51_RS02085 0.72 +0.7 468,401 - ABIE51_RS02085 0.72 -1.7 468,401 - ABIE51_RS02085 0.72 -0.1 468,667 + +0.2 468,668 - -0.6 469,088 + ABIE51_RS02090 0.53 -0.5 469,088 + ABIE51_RS02090 0.53 +0.9 469,089 - ABIE51_RS02090 0.53 +1.3 469,089 - ABIE51_RS02090 0.53 +0.5 469,089 - ABIE51_RS02090 0.53 +0.3 469,089 - ABIE51_RS02090 0.53 +0.7 469,203 + ABIE51_RS02090 0.65 +0.4 469,203 + ABIE51_RS02090 0.65 +0.8 469,204 - ABIE51_RS02090 0.65 +1.8 469,204 - ABIE51_RS02090 0.65 +0.8 469,204 - ABIE51_RS02090 0.65 -0.7 469,298 - ABIE51_RS02090 0.75 +0.4 469,312 + ABIE51_RS02090 0.76 -0.3 469,312 + ABIE51_RS02090 0.76 +1.9 469,312 + ABIE51_RS02090 0.76 -2.3 469,312 + ABIE51_RS02090 0.76 -0.0 469,312 + ABIE51_RS02090 0.76 +0.7 469,313 - ABIE51_RS02090 0.76 -0.3 469,313 - ABIE51_RS02090 0.76 -0.7 469,313 - ABIE51_RS02090 0.76 -0.3 469,313 - ABIE51_RS02090 0.76 +1.7 469,313 - ABIE51_RS02090 0.76 -0.0 469,313 - ABIE51_RS02090 0.76 +0.6 469,313 - ABIE51_RS02090 0.76 -0.5 469,313 - ABIE51_RS02090 0.76 -0.5 469,313 - ABIE51_RS02090 0.76 +0.6 469,402 + ABIE51_RS02090 0.86 +0.1 469,402 + ABIE51_RS02090 0.86 -0.3 469,403 - ABIE51_RS02090 0.86 -0.9 469,403 - ABIE51_RS02090 0.86 +0.0 469,510 + -0.1 469,510 + +0.2 469,510 + +1.6 469,510 + -0.4 469,511 - +1.1 469,511 - -2.3 469,797 + ABIE51_RS02095 0.31 -0.8 469,797 + ABIE51_RS02095 0.31 -1.7 469,797 + ABIE51_RS02095 0.31 +0.3 469,797 + ABIE51_RS02095 0.31 -1.5 469,797 + ABIE51_RS02095 0.31 +0.4 469,797 + ABIE51_RS02095 0.31 -1.8 469,798 - ABIE51_RS02095 0.31 +0.6 469,798 - ABIE51_RS02095 0.31 -0.3 469,798 - ABIE51_RS02095 0.31 +0.8 469,798 - ABIE51_RS02095 0.31 -2.5 469,798 - ABIE51_RS02095 0.31 +0.1 469,798 - ABIE51_RS02095 0.31 +0.4 469,798 - ABIE51_RS02095 0.31 +0.9 469,798 - ABIE51_RS02095 0.31 +0.3 469,798 - ABIE51_RS02095 0.31 -1.5 469,798 - ABIE51_RS02095 0.31 -2.3 469,798 - ABIE51_RS02095 0.31 +0.3 469,798 - ABIE51_RS02095 0.31 +0.3 469,798 - ABIE51_RS02095 0.31 +0.9 469,875 + ABIE51_RS02095 0.40 -2.4 469,876 - ABIE51_RS02095 0.40 -0.5 469,926 + ABIE51_RS02095 0.46 +0.9 469,926 + ABIE51_RS02095 0.46 -0.7 469,926 + ABIE51_RS02095 0.46 -0.2 469,926 + ABIE51_RS02095 0.46 +0.3 469,927 - ABIE51_RS02095 0.47 -3.4 469,927 - ABIE51_RS02095 0.47 +0.7 469,927 - ABIE51_RS02095 0.47 +0.2 469,965 + ABIE51_RS02095 0.51 +1.0 469,966 - ABIE51_RS02095 0.51 +0.6 469,966 - ABIE51_RS02095 0.51 +1.3 470,127 + ABIE51_RS02095 0.70 +1.0 470,127 + ABIE51_RS02095 0.70 -0.2 470,128 - ABIE51_RS02095 0.70 -0.2 470,128 - ABIE51_RS02095 0.70 +0.2 470,128 - ABIE51_RS02095 0.70 +0.1 470,128 - ABIE51_RS02095 0.70 +0.3 470,441 + -0.2 470,441 + +0.0 470,441 + +0.4 470,441 + +0.7
Or see this region's nucleotide sequence