Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03229

Experiment: L-Tryptophan (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (N)
3,393,366	-		CCNA_03228	0.55	-0.0
3,393,366	-		CCNA_03228	0.55	-0.6
3,393,370	-		CCNA_03228	0.55	+0.2
3,393,397	+		CCNA_03228	0.56	+0.1
3,393,401	+		CCNA_03228	0.57	-2.6
3,393,430	+		CCNA_03228	0.58	+1.5
3,393,440	+		CCNA_03228	0.59	-0.3
3,393,440	+		CCNA_03228	0.59	-0.2
3,393,448	-		CCNA_03228	0.59	+1.2
3,393,462	-		CCNA_03228	0.60	+1.3
3,393,494	-		CCNA_03228	0.61	-0.0
3,393,533	+		CCNA_03228	0.63	-0.1
3,393,560	+		CCNA_03228	0.64	+0.9
3,393,564	-		CCNA_03228	0.65	+0.5
3,393,583	+		CCNA_03228	0.66	-2.1
3,393,583	+		CCNA_03228	0.66	-2.4
3,393,591	-		CCNA_03228	0.66	-0.3
3,393,591	-		CCNA_03228	0.66	+0.2
3,393,617	-		CCNA_03228	0.67	-0.0
3,393,645	+		CCNA_03228	0.69	+0.4
3,393,651	+		CCNA_03228	0.69	-0.8
3,393,656	+		CCNA_03228	0.69	-1.7
3,393,656	+		CCNA_03228	0.69	-1.5
3,393,656	+		CCNA_03228	0.69	-0.1
3,393,656	+		CCNA_03228	0.69	-3.3
3,393,656	+		CCNA_03228	0.69	+0.5
3,393,664	-		CCNA_03228	0.70	+1.1
3,393,664	-		CCNA_03228	0.70	-0.1
3,393,667	-		CCNA_03228	0.70	+0.4
3,393,669	+		CCNA_03228	0.70	+0.4
3,393,677	-		CCNA_03228	0.70	+1.1
3,393,677	-		CCNA_03228	0.70	+0.1
3,393,677	-		CCNA_03228	0.70	-0.6
3,393,757	+		CCNA_03228	0.74	-1.0
3,393,757	+		CCNA_03228	0.74	-2.3
3,393,757	+		CCNA_03228	0.74	-1.1
3,393,765	-				+3.1
3,393,765	-		CCNA_03228	0.75	+0.0
3,393,765	-		CCNA_03228	0.75	-0.7
3,393,782	+		CCNA_03228	0.75	+1.2
3,393,811	-		CCNA_03228	0.77	-0.1
3,393,814	-		CCNA_03228	0.77	+0.9
3,393,826	+		CCNA_03228	0.78	-1.1
3,393,826	-		CCNA_03228	0.78	+1.5
3,393,905	+		CCNA_03228	0.82	-1.7
3,393,913	-		CCNA_03228	0.82	+0.4
3,393,921	-		CCNA_03228	0.82	+0.5
3,393,934	+		CCNA_03228	0.83	-1.2
3,393,934	+		CCNA_03228	0.83	-0.3
3,393,942	-		CCNA_03228	0.83	-0.1
3,393,947	-		CCNA_03228	0.84	+0.1
3,393,952	-		CCNA_03228	0.84	-0.3
3,393,952	-		CCNA_03228	0.84	+0.9
3,393,958	-		CCNA_03228	0.84	+1.3
3,393,968	+		CCNA_03228	0.85	-2.0
3,393,968	+		CCNA_03228	0.85	-0.7
3,394,020	+		CCNA_03228	0.87	-1.7
3,394,027	-		CCNA_03228	0.88	+0.3
3,394,045	+		CCNA_03228	0.88	+0.4
3,394,057	+		CCNA_03228	0.89	-0.8
3,394,065	-		CCNA_03228	0.89	+0.7
3,394,065	-		CCNA_03228	0.89	-1.2
3,394,065	-		CCNA_03228	0.89	-2.0
3,394,107	-				-0.4
3,394,123	+				+1.3
3,394,132	+				-0.7
3,394,161	+				-0.8
3,394,167	-				+0.4
3,394,171	+				+0.2
3,394,179	-				+0.6
3,394,204	+				-1.3
3,394,212	-				-1.0
3,394,280	+				+0.7
3,394,280	+				-2.0
3,394,280	+				-1.2
3,394,288	-				-2.1
3,394,288	-				+0.5
3,394,288	-				-0.5
3,394,288	-				-0.7
3,394,288	-				-1.8
3,394,293	+				-1.8
3,394,301	-				+1.0
3,394,302	-				+1.4
3,394,307	-				+1.4
3,394,312	+				+0.9
3,394,324	+				-0.5
3,394,377	+				-2.8
3,394,445	+				-1.1
3,394,455	-				-0.5
3,394,473	+				+0.6
3,394,534	+		CCNA_03229	0.13	+1.2
3,394,534	+		CCNA_03229	0.13	+0.7
3,394,534	+		CCNA_03229	0.13	+0.5
3,394,534	+		CCNA_03229	0.13	-2.0
3,394,541	-		CCNA_03229	0.14	-1.0
3,394,542	-		CCNA_03229	0.14	+0.4
3,394,542	-		CCNA_03229	0.14	-0.0
3,394,542	-		CCNA_03229	0.14	+0.1
3,394,542	-		CCNA_03229	0.14	-0.5
3,394,547	-		CCNA_03229	0.14	-0.5
3,394,547	-		CCNA_03229	0.14	-0.3
3,394,593	+		CCNA_03229	0.18	-0.4
3,394,593	+		CCNA_03229	0.18	-1.0
3,394,600	+		CCNA_03229	0.19	-0.7
3,394,601	-		CCNA_03229	0.19	-2.5
3,394,601	-		CCNA_03229	0.19	+0.2
3,394,601	-		CCNA_03229	0.19	+0.7
3,394,608	-		CCNA_03229	0.19	-0.9
3,394,612	+		CCNA_03229	0.20	-1.4
3,394,617	-		CCNA_03229	0.20	+0.2
3,394,625	+		CCNA_03229	0.21	-1.1
3,394,633	-		CCNA_03229	0.21	-0.8
3,394,657	-		CCNA_03229	0.23	-1.7
3,394,669	-		CCNA_03229	0.24	+0.0
3,394,777	+		CCNA_03229	0.32	-1.2
3,394,785	-		CCNA_03229	0.33	-0.5
3,394,809	+		CCNA_03229	0.35	-0.7
3,394,883	+		CCNA_03229	0.41	+0.0
3,394,885	-		CCNA_03229	0.41	+0.2
3,394,891	-		CCNA_03229	0.41	-0.7
3,394,901	-		CCNA_03229	0.42	-2.2
3,394,928	-		CCNA_03229	0.44	-0.7
3,394,928	-		CCNA_03229	0.44	-1.1
3,395,012	+		CCNA_03229	0.51	-1.9
3,395,014	-		CCNA_03229	0.51	+0.6
3,395,053	-		CCNA_03229	0.54	-0.3
3,395,053	-		CCNA_03229	0.54	-0.7
3,395,058	-		CCNA_03229	0.54	+0.9
3,395,058	-		CCNA_03229	0.54	-0.7
3,395,058	-		CCNA_03229	0.54	-0.9
3,395,074	-		CCNA_03229	0.55	-1.7
3,395,130	-		CCNA_03229	0.60	+1.8
3,395,143	-		CCNA_03229	0.61	+0.7
3,395,172	+		CCNA_03229	0.63	+2.2
3,395,180	-		CCNA_03229	0.64	-0.9
3,395,181	+		CCNA_03229	0.64	-1.5
3,395,181	+		CCNA_03229	0.64	-1.7
3,395,181	+		CCNA_03229	0.64	-3.4
3,395,189	-		CCNA_03229	0.64	-0.9
3,395,194	+		CCNA_03229	0.65	-0.4
3,395,208	+		CCNA_03229	0.66	-1.5
3,395,232	-		CCNA_03229	0.68	-0.7
3,395,233	-		CCNA_03229	0.68	-1.2
3,395,251	-		CCNA_03229	0.69	-1.6
3,395,260	+		CCNA_03229	0.70	-0.9
3,395,260	+		CCNA_03229	0.70	-0.7
3,395,268	-		CCNA_03229	0.70	-1.1
3,395,268	-		CCNA_03229	0.70	-1.1
3,395,284	+		CCNA_03229	0.72	+0.2
3,395,291	+		CCNA_03229	0.72	-0.3
3,395,325	+		CCNA_03229	0.75	-2.0
3,395,331	-		CCNA_03229	0.75	-1.7
3,395,332	-		CCNA_03229	0.75	-0.3
3,395,403	-		CCNA_03229	0.81	-0.8
3,395,405	+		CCNA_03229	0.81	+0.3
3,395,410	+		CCNA_03229	0.81	+0.7
3,395,413	-		CCNA_03229	0.82	+0.2
3,395,413	-		CCNA_03229	0.82	+0.6
3,395,413	-		CCNA_03229	0.82	+0.3
3,395,413	-		CCNA_03229	0.82	-0.8
3,395,456	+		CCNA_03229	0.85	-1.0
3,395,479	+		CCNA_03229	0.87	-0.7
3,395,493	-		CCNA_03229	0.88	-0.7
3,395,493	-		CCNA_03229	0.88	+0.2
3,395,506	+		CCNA_03229	0.89	-0.6
3,395,510	-		CCNA_03229	0.89	-0.2
3,395,514	-		CCNA_03229	0.89	+0.8
3,395,525	+				-1.0
3,395,525	+				+0.3
3,395,538	-				+1.2
3,395,567	+				-0.3
3,395,581	+				+1.1
3,395,583	-				+0.5
3,395,608	+				-0.2
3,395,616	-				+2.7
3,395,621	+				-0.6
3,395,621	+				-1.8
3,395,636	-				+0.4
3,395,645	+				-1.8
3,395,668	+				-1.5
3,395,668	+				-1.8
3,395,676	-				+0.4
3,395,681	-				-1.1
3,395,754	-				+0.1
3,395,762	-				+0.6
3,395,762	-				+0.7
3,395,781	-				+1.1
3,395,796	+				-1.0
3,395,806	+				+1.5
3,395,806	+				-2.2
3,395,806	+				-0.1
3,395,806	+				-3.5
3,395,806	+				-1.6
3,395,806	+				-3.3
3,395,806	+				-1.1
3,395,806	+				-0.0
3,395,806	+				-0.8
3,395,806	+				+0.0
3,395,806	+				-0.3
3,395,806	+				-1.9
3,395,806	+				-3.0
3,395,806	+				-1.5
3,395,806	+				+2.9
3,395,806	+				-1.3
3,395,806	+				+0.0
3,395,806	+				-0.5
3,395,806	+				+0.1
3,395,814	-				-0.5
3,395,814	-				+0.1
3,395,814	-				+0.9
3,395,814	-				-1.1
3,395,814	-				+0.9
3,395,814	-				+0.5
3,395,814	-				+0.9
3,395,814	-				-1.2
3,395,814	-				-0.2
3,395,814	-				+1.1
3,395,814	-				-0.2
3,395,814	-				+0.7
3,395,814	-				+0.2
3,395,814	-				-0.3
3,395,814	-				-0.7
3,395,814	-				+0.6
3,395,814	-				+1.5
3,395,814	-				-1.4
3,395,814	-				+1.0
3,395,814	-				+0.7
3,395,814	-				-0.7
3,395,814	-				-0.5
3,395,814	-				-0.8
3,395,814	-				+0.0
3,395,814	-				+0.6
3,395,814	-				+1.1
3,395,814	-				+2.4
3,395,814	-				+0.1
3,395,814	-				+0.5
3,395,814	-				-0.7
3,395,814	-				+0.4
3,395,814	-				+0.3
3,395,814	-				+1.2
3,395,876	-		CCNA_03230	0.11	-1.9
3,395,906	-		CCNA_03230	0.13	+0.2
3,395,943	+		CCNA_03230	0.16	+0.0
3,395,950	+		CCNA_03230	0.16	-3.3
3,395,958	-		CCNA_03230	0.17	+0.3
3,395,958	-		CCNA_03230	0.17	-0.6
3,396,008	-		CCNA_03230	0.20	+1.5
3,396,075	+		CCNA_03230	0.25	-1.1
3,396,088	-		CCNA_03230	0.26	+0.4
3,396,099	-		CCNA_03230	0.27	+0.5
3,396,099	-				+1.5
3,396,107	+		CCNA_03230	0.27	+2.7
3,396,107	+		CCNA_03230	0.27	-1.9
3,396,141	+		CCNA_03230	0.30	-1.8
3,396,156	-		CCNA_03230	0.31	-1.9
3,396,241	+		CCNA_03230	0.37	-0.4
3,396,248	+		CCNA_03230	0.37	-1.6
3,396,292	+		CCNA_03230	0.41	-2.4
3,396,303	-		CCNA_03230	0.41	+1.9
3,396,344	+		CCNA_03230	0.44	+1.5
3,396,352	-		CCNA_03230	0.45	-1.8
3,396,358	+		CCNA_03230	0.45	-2.0
3,396,378	+		CCNA_03230	0.47	-0.6
3,396,429	+		CCNA_03230	0.50	-2.0
3,396,440	+		CCNA_03230	0.51	-2.1
3,396,442	-		CCNA_03230	0.51	-0.7
3,396,448	-		CCNA_03230	0.52	-0.4
3,396,514	-		CCNA_03230	0.56	-0.0
3,396,518	+		CCNA_03230	0.57	-0.2
3,396,565	-		CCNA_03230	0.60	-1.2
3,396,575	+		CCNA_03230	0.61	-1.5
3,396,575	+		CCNA_03230	0.61	+2.9
3,396,575	+		CCNA_03230	0.61	+0.3
3,396,583	-		CCNA_03230	0.61	-1.2
3,396,585	+		CCNA_03230	0.62	+0.7
3,396,593	-		CCNA_03230	0.62	+0.7
3,396,611	+				+2.5
3,396,627	-		CCNA_03230	0.65	+1.6