Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03222

Experiment: L-Tryptophan (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Tryptophan (N)
3,383,721	-		CCNA_03221	0.44	-0.6
3,383,728	+		CCNA_03221	0.44	+3.5
3,383,757	-		CCNA_03221	0.46	-2.1
3,383,808	+		CCNA_03221	0.49	+1.2
3,383,808	+		CCNA_03221	0.49	-0.1
3,383,816	-		CCNA_03221	0.50	-0.1
3,383,816	-		CCNA_03221	0.50	+1.0
3,383,846	+		CCNA_03221	0.52	-0.8
3,383,936	+		CCNA_03221	0.57	-1.0
3,383,987	+		CCNA_03221	0.60	+0.6
3,384,017	+		CCNA_03221	0.62	+2.5
3,384,017	+		CCNA_03221	0.62	+1.3
3,384,027	+		CCNA_03221	0.63	-0.7
3,384,035	-		CCNA_03221	0.63	-0.7
3,384,092	+		CCNA_03221	0.67	-0.4
3,384,097	+		CCNA_03221	0.67	+1.1
3,384,105	-		CCNA_03221	0.67	+0.4
3,384,118	+		CCNA_03221	0.68	+1.5
3,384,129	+		CCNA_03221	0.69	-1.7
3,384,129	+		CCNA_03221	0.69	-0.9
3,384,131	+		CCNA_03221	0.69	-0.4
3,384,144	-		CCNA_03221	0.70	+0.0
3,384,144	-		CCNA_03221	0.70	-0.4
3,384,144	-		CCNA_03221	0.70	-1.2
3,384,162	-		CCNA_03221	0.71	-0.4
3,384,192	-		CCNA_03221	0.73	+0.7
3,384,192	-		CCNA_03221	0.73	+2.5
3,384,193	-		CCNA_03221	0.73	+0.0
3,384,199	-		CCNA_03221	0.73	+0.1
3,384,214	-		CCNA_03221	0.74	-0.7
3,384,220	-		CCNA_03221	0.74	+1.5
3,384,296	+		CCNA_03221	0.79	-0.1
3,384,304	-		CCNA_03221	0.80	+0.3
3,384,319	+		CCNA_03221	0.81	+1.4
3,384,327	-		CCNA_03221	0.81	-0.6
3,384,331	+		CCNA_03221	0.81	+1.4
3,384,337	+		CCNA_03221	0.82	-1.5
3,384,347	+		CCNA_03221	0.82	+1.5
3,384,352	+		CCNA_03221	0.83	+0.6
3,384,352	+		CCNA_03221	0.83	+0.4
3,384,388	+		CCNA_03221	0.85	+0.7
3,384,391	-		CCNA_03221	0.85	+0.7
3,384,403	-		CCNA_03221	0.86	+0.5
3,384,417	+		CCNA_03221	0.87	-2.4
3,384,436	-		CCNA_03221	0.88	-1.9
3,384,436	-		CCNA_03221	0.88	+0.2
3,384,445	-		CCNA_03221	0.88	-0.7
3,384,447	+		CCNA_03221	0.88	-0.4
3,384,447	+		CCNA_03221	0.88	+0.3
3,384,447	+		CCNA_03221	0.88	-0.1
3,384,447	+		CCNA_03221	0.88	+2.2
3,384,447	+		CCNA_03221	0.88	+0.9
3,384,452	+		CCNA_03221	0.89	+0.9
3,384,455	-		CCNA_03221	0.89	-1.3
3,384,455	-		CCNA_03221	0.89	+0.2
3,384,455	-		CCNA_03221	0.89	-2.1
3,384,455	-		CCNA_03221	0.89	-1.0
3,384,513	-				-1.4
3,384,515	-				-1.1
3,384,515	-				-1.1
3,384,559	+				+0.1
3,384,579	-				-0.8
3,384,602	-				-1.2
3,384,607	+				-0.7
3,384,673	+				+1.0
3,384,675	+				+0.4
3,384,677	+				+1.2
3,384,681	-				-2.5
3,384,685	-				-0.6
3,384,691	-				-3.8
3,384,691	-				-1.0
3,384,708	+				+1.2
3,384,722	+				+1.5
3,384,797	+				+1.6
3,384,823	+		CCNA_03222	0.10	-0.4
3,384,823	+		CCNA_03222	0.10	-0.7
3,384,824	+		CCNA_03222	0.10	+1.4
3,384,824	+		CCNA_03222	0.10	-0.4
3,384,824	+		CCNA_03222	0.10	+0.9
3,384,844	+		CCNA_03222	0.12	-1.0
3,384,854	+		CCNA_03222	0.13	-0.6
3,384,859	+		CCNA_03222	0.13	-0.3
3,384,859	+		CCNA_03222	0.13	+1.4
3,384,859	+		CCNA_03222	0.13	-0.8
3,384,859	+		CCNA_03222	0.13	+0.3
3,384,867	-		CCNA_03222	0.14	-1.2
3,384,918	-		CCNA_03222	0.18	-0.8
3,384,925	+		CCNA_03222	0.19	-0.9
3,384,925	+		CCNA_03222	0.19	+1.0
3,384,941	-		CCNA_03222	0.20	-1.3
3,384,953	+		CCNA_03222	0.21	-1.1
3,385,074	-		CCNA_03222	0.31	-1.4
3,385,079	-		CCNA_03222	0.31	-2.0
3,385,082	+		CCNA_03222	0.32	+1.4
3,385,089	+		CCNA_03222	0.32	+0.4
3,385,089	-		CCNA_03222	0.32	-1.4
3,385,094	+		CCNA_03222	0.33	-0.6
3,385,097	-		CCNA_03222	0.33	-1.5
3,385,143	+		CCNA_03222	0.37	-0.2
3,385,162	-		CCNA_03222	0.38	-0.4
3,385,242	-		CCNA_03222	0.45	-1.9
3,385,268	-		CCNA_03222	0.47	-1.0
3,385,274	+		CCNA_03222	0.47	+0.9
3,385,298	-		CCNA_03222	0.49	-1.1
3,385,316	-		CCNA_03222	0.51	-0.5
3,385,372	+		CCNA_03222	0.55	-1.0
3,385,380	-		CCNA_03222	0.56	+1.1
3,385,417	+		CCNA_03222	0.59	-0.5
3,385,433	+		CCNA_03222	0.60	+0.7
3,385,438	+		CCNA_03222	0.61	+0.4
3,385,441	-		CCNA_03222	0.61	-1.3
3,385,446	-		CCNA_03222	0.62	+0.1
3,385,491	+		CCNA_03222	0.65	-0.5
3,385,491	+		CCNA_03222	0.65	-2.0
3,385,524	+		CCNA_03222	0.68	-1.7
3,385,542	-		CCNA_03222	0.69	-0.5
3,385,566	+		CCNA_03222	0.71	-1.8
3,385,566	+		CCNA_03222	0.71	+0.4
3,385,566	+		CCNA_03222	0.71	+0.5
3,385,574	-		CCNA_03222	0.72	-2.8
3,385,574	-		CCNA_03222	0.72	-2.6
3,385,574	-		CCNA_03222	0.72	-1.5
3,385,610	-		CCNA_03222	0.75	-1.0
3,385,627	+		CCNA_03222	0.76	+0.1
3,385,636	+		CCNA_03222	0.77	+1.1
3,385,671	+		CCNA_03222	0.80	-0.0
3,385,671	+		CCNA_03222	0.80	-1.3
3,385,671	+		CCNA_03222	0.80	+0.3
3,385,679	-		CCNA_03222	0.81	-0.9
3,385,741	+		CCNA_03222	0.86	-2.0
3,385,741	+		CCNA_03222	0.86	+0.6
3,385,741	+		CCNA_03222	0.86	-1.1
3,385,741	+		CCNA_03222	0.86	+0.3
3,385,746	+		CCNA_03222	0.86	+0.2
3,385,749	-		CCNA_03222	0.87	+0.7
3,385,771	-		CCNA_03222	0.88	-2.1
3,385,791	-				-0.1
3,385,843	-				-0.1
3,385,845	+				+0.5
3,385,845	+				+0.7
3,385,845	+				+2.1
3,385,913	+				+1.4
3,385,939	+				+0.5
3,385,945	-				-0.7
3,386,019	-				-0.7
3,386,024	-				+0.4
3,386,024	-				-0.8
3,386,070	+				+1.1
3,386,070	+				-0.3
3,386,078	-				-0.7
3,386,093	-				-0.3
3,386,093	-				+0.0
3,386,128	-		CCNA_03223	0.13	-1.4
3,386,129	-		CCNA_03223	0.13	+0.2
3,386,144	-		CCNA_03223	0.16	+2.1
3,386,153	-		CCNA_03223	0.17	+0.1
3,386,166	+		CCNA_03223	0.19	+1.5
3,386,166	+		CCNA_03223	0.19	+1.7
3,386,174	-		CCNA_03223	0.21	+0.0
3,386,178	-		CCNA_03223	0.21	-0.8
3,386,181	+		CCNA_03223	0.22	+2.0
3,386,228	-		CCNA_03223	0.29	-0.6
3,386,233	-		CCNA_03223	0.30	-2.6
3,386,323	+		CCNA_03223	0.45	+1.2
3,386,353	+		CCNA_03223	0.50	+1.4
3,386,426	+		CCNA_03223	0.62	+1.2
3,386,426	+		CCNA_03223	0.62	+1.5
3,386,431	+		CCNA_03223	0.63	+1.9
3,386,431	+		CCNA_03223	0.63	+0.9
3,386,431	+		CCNA_03223	0.63	+1.0
3,386,431	+		CCNA_03223	0.63	+1.2
3,386,431	+		CCNA_03223	0.63	+1.6
3,386,431	+		CCNA_03223	0.63	+1.6
3,386,431	+		CCNA_03223	0.63	+1.5
3,386,431	+		CCNA_03223	0.63	+1.4
3,386,431	+		CCNA_03223	0.63	+1.5
3,386,434	-		CCNA_03223	0.63	+1.1
3,386,434	-		CCNA_03223	0.63	+0.4
3,386,434	-		CCNA_03223	0.63	-1.3
3,386,434	-		CCNA_03223	0.63	-1.0
3,386,434	-		CCNA_03223	0.63	+0.2
3,386,439	-		CCNA_03223	0.64	-1.0
3,386,439	-		CCNA_03223	0.64	+0.5
3,386,439	-		CCNA_03223	0.64	+0.2
3,386,453	+		CCNA_03223	0.66	+1.5
3,386,489	+		CCNA_03223	0.72	+0.8
3,386,497	-		CCNA_03223	0.74	-1.1
3,386,545	+		CCNA_03223	0.81	+1.2
3,386,547	-		CCNA_03223	0.82	-0.0
3,386,570	-		CCNA_03223	0.86	+1.1
3,386,572	+		CCNA_03223	0.86	+0.9
3,386,572	+		CCNA_03223	0.86	-0.1
3,386,580	-		CCNA_03223	0.87	+1.5
3,386,580	-		CCNA_03223	0.87	-1.5
3,386,605	+				-0.5
3,386,684	+				+0.7
3,386,706	-				+0.8
3,386,716	-				+0.7
3,386,786	-		CCNA_03224	0.29	-1.4
3,386,828	+		CCNA_03224	0.46	+0.2
3,386,882	-		CCNA_03224	0.69	+1.4
3,386,911	-		CCNA_03224	0.81	+0.5