Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_663 and Ac3H11_664 are separated by 136 nucleotides Ac3H11_664 and Ac3H11_665 are separated by 202 nucleotides
Ac3H11_663 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 19,563 to 21,242
_663
Ac3H11_664 - 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9), at 21,379 to 22,134
_664
Ac3H11_665 - Magnesium and cobalt transport protein CorA, at 22,337 to 23,323
_665
Position (kb) 21
22
23 Strain fitness (log2 ratio) -2
-1
0
1
2 at 20.643 kb on + strand, within Ac3H11_663 at 20.643 kb on + strand, within Ac3H11_663 at 20.643 kb on + strand, within Ac3H11_663 at 20.700 kb on + strand, within Ac3H11_663 at 20.701 kb on - strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.736 kb on + strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.737 kb on - strand, within Ac3H11_663 at 20.877 kb on + strand, within Ac3H11_663 at 20.878 kb on - strand, within Ac3H11_663 at 20.976 kb on + strand, within Ac3H11_663 at 20.976 kb on + strand, within Ac3H11_663 at 21.240 kb on + strand at 21.241 kb on - strand at 21.378 kb on + strand at 21.379 kb on - strand at 21.379 kb on - strand at 21.385 kb on - strand at 21.385 kb on - strand at 21.385 kb on - strand at 21.385 kb on - strand at 21.661 kb on + strand, within Ac3H11_664 at 21.661 kb on + strand, within Ac3H11_664 at 21.661 kb on + strand, within Ac3H11_664 at 21.661 kb on + strand, within Ac3H11_664 at 21.661 kb on + strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.662 kb on - strand, within Ac3H11_664 at 21.718 kb on + strand, within Ac3H11_664 at 21.719 kb on - strand, within Ac3H11_664 at 21.995 kb on - strand, within Ac3H11_664 at 22.211 kb on + strand at 22.211 kb on + strand at 22.212 kb on - strand at 22.212 kb on - strand at 22.212 kb on - strand at 22.224 kb on - strand at 22.224 kb on - strand at 22.338 kb on + strand at 22.338 kb on + strand at 22.338 kb on + strand at 22.339 kb on - strand at 22.339 kb on - strand at 22.339 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 20,643 + Ac3H11_663 0.64 -0.2 20,643 + Ac3H11_663 0.64 -2.5 20,643 + Ac3H11_663 0.64 -0.2 20,700 + Ac3H11_663 0.68 -0.4 20,701 - Ac3H11_663 0.68 -0.5 20,736 + Ac3H11_663 0.70 -0.6 20,736 + Ac3H11_663 0.70 -0.5 20,736 + Ac3H11_663 0.70 -0.2 20,736 + Ac3H11_663 0.70 +0.2 20,736 + Ac3H11_663 0.70 -2.1 20,736 + Ac3H11_663 0.70 +1.8 20,736 + Ac3H11_663 0.70 -0.4 20,736 + Ac3H11_663 0.70 -0.6 20,736 + Ac3H11_663 0.70 +0.3 20,736 + Ac3H11_663 0.70 -0.7 20,736 + Ac3H11_663 0.70 -1.1 20,736 + Ac3H11_663 0.70 -1.9 20,736 + Ac3H11_663 0.70 +0.5 20,736 + Ac3H11_663 0.70 +0.9 20,737 - Ac3H11_663 0.70 -0.5 20,737 - Ac3H11_663 0.70 -0.3 20,737 - Ac3H11_663 0.70 +0.5 20,737 - Ac3H11_663 0.70 +0.3 20,737 - Ac3H11_663 0.70 +0.1 20,737 - Ac3H11_663 0.70 -0.8 20,737 - Ac3H11_663 0.70 +0.3 20,737 - Ac3H11_663 0.70 +0.0 20,737 - Ac3H11_663 0.70 -0.4 20,877 + Ac3H11_663 0.78 -2.7 20,878 - Ac3H11_663 0.78 +0.5 20,976 + Ac3H11_663 0.84 -0.1 20,976 + Ac3H11_663 0.84 +0.1 21,240 + -0.3 21,241 - +2.7 21,378 + +1.4 21,379 - +0.2 21,379 - +1.6 21,385 - +0.8 21,385 - -0.4 21,385 - -0.6 21,385 - -0.3 21,661 + Ac3H11_664 0.37 -1.5 21,661 + Ac3H11_664 0.37 +1.0 21,661 + Ac3H11_664 0.37 +1.6 21,661 + Ac3H11_664 0.37 +0.6 21,661 + Ac3H11_664 0.37 +0.2 21,662 - Ac3H11_664 0.37 +0.7 21,662 - Ac3H11_664 0.37 +0.1 21,662 - Ac3H11_664 0.37 +0.2 21,662 - Ac3H11_664 0.37 +0.2 21,662 - Ac3H11_664 0.37 -0.3 21,662 - Ac3H11_664 0.37 -0.7 21,718 + Ac3H11_664 0.45 +0.2 21,719 - Ac3H11_664 0.45 -0.1 21,995 - Ac3H11_664 0.81 +0.2 22,211 + +0.5 22,211 + +1.5 22,212 - +0.7 22,212 - +0.5 22,212 - +2.0 22,224 - +0.2 22,224 - -0.3 22,338 + -0.4 22,338 + +0.7 22,338 + +0.5 22,339 - -0.6 22,339 - +0.4 22,339 - +0.0
Or see this region's nucleotide sequence